| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,020,779 | A→G | 6.9% | intergenic (‑45/+189) | PP_5679 ← / ← PP_4421 | hypothetical protein/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,020,779 | 0 | A | G | 6.9% | 680.8 / 26.0 | 217 | intergenic (‑45/+189) | PP_5679/PP_4421 | hypothetical protein/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (96/106); new base G (7/8); total (103/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01 | |||||||||||
Only 100 of 220 total aligned reads displayed.
ACTCACCCGTAGCCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAA > NC_002947/5020630‑5020928 | cACCCGTAGCCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCg > 2:144983/1‑150 (MQ=255) aCCCGTAGCCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCgg > 2:3218606/1‑150 (MQ=255) gCCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCgg > 2:4776966/1‑150 (MQ=255) gCCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCgg > 1:4960647/1‑150 (MQ=255) ccGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGgc > 1:4519183/1‑150 (MQ=255) gCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGgcgc > 2:1653718/1‑150 (MQ=255) ttGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCGCGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCgg < 2:3350020/150‑1 (MQ=255) ttGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCgg < 2:2144996/150‑1 (MQ=255) tGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCGCCGGAGACCGGTGCggg < 2:4895824/150‑1 (MQ=255) agagTGCCTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCGCCGGAGACCGGTGCGGGCtt < 1:3890686/150‑1 (MQ=255) gTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCACACCGGTCTCCGGCGCGGGCTTTTa < 1:2253442/150‑1 (MQ=255) ctgctgGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCGCCGGAGACCGGTGCGGGCttattcatc < 1:3457443/150‑8 (MQ=39) tgGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCgg > 2:4070526/1‑150 (MQ=255) ggCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGc > 1:5483664/1‑150 (MQ=255) ggCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGc < 1:1206042/150‑1 (MQ=255) ggCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGc > 2:4543864/1‑150 (MQ=255) gCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGcc > 2:2109538/1‑150 (MQ=255) aCGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCtt < 2:5399199/150‑1 (MQ=255) gAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTgg > 2:2892254/1‑150 (MQ=255) gAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTgg > 2:1592596/1‑150 (MQ=255) gCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACa < 2:4495704/150‑1 (MQ=255) gCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACa < 2:3795694/150‑1 (MQ=255) ctcGGCAGCCCTGGCCGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCGTAGCGCTCTCGTTTGAGTCCACGATTAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGTCAGTAt < 2:563750/150‑1 (MQ=255) ctcGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCGTCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTAt < 2:1419728/150‑1 (MQ=255) tcGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATc < 2:289836/150‑1 (MQ=255) cAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGAc < 1:261031/150‑1 (MQ=255) aGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGAcc < 1:1972352/150‑1 (MQ=255) cccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCg > 2:3660251/1‑150 (MQ=255) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGa < 1:2146253/150‑1 (MQ=255) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCACGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGa > 2:2913568/1‑150 (MQ=255) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGaaa > 2:3829771/1‑150 (MQ=255) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGaaa < 2:2254933/150‑1 (MQ=255) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGaaa < 2:3698623/150‑1 (MQ=255) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGaaa < 2:4256518/150‑1 (MQ=255) cGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTAc < 1:5415130/150‑1 (MQ=255) ggTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCtt < 1:1788342/150‑1 (MQ=255) gTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTtg > 1:2636842/1‑150 (MQ=255) gTAGCCACTGCTGCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTCTCTGACCCGACAGTACGTCCTtg > 2:1023442/1‑150 (MQ=255) tAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTtgt < 1:3689025/150‑1 (MQ=255) tAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGACCTtgt > 1:2839746/1‑150 (MQ=255) ccACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGaa < 1:4627511/150‑1 (MQ=255) ccACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGaa < 1:5072491/150‑1 (MQ=255) cACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTGTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAAc > 1:4904491/1‑150 (MQ=255) cACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAAc < 1:398348/150‑1 (MQ=255) gCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgat < 1:1415320/150‑1 (MQ=255) gCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgat < 1:4176334/150‑1 (MQ=255) cttcttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgatg > 1:1240730/1‑150 (MQ=255) ttcttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgatga > 2:581599/1‑150 (MQ=255) ttcttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgatga > 2:1177562/1‑150 (MQ=255) ttGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGc > 1:1034699/1‑150 (MQ=255) gATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCttt < 2:266944/87‑1 (MQ=255) gATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCttt > 1:266944/1‑87 (MQ=255) gATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGt < 1:1005223/150‑1 (MQ=255) aTCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTc < 1:3646518/150‑1 (MQ=255) aTCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTc < 2:4411976/150‑1 (MQ=255) tCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCt > 2:2614035/1‑150 (MQ=255) cGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCtt < 2:881114/150‑1 (MQ=255) cGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCtt < 1:856165/150‑1 (MQ=255) cGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCtt < 1:3555582/150‑1 (MQ=255) ggAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTg < 1:3432360/150‑1 (MQ=255) gAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTgg > 2:3901866/1‑150 (MQ=255) aGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGc < 1:4810304/150‑1 (MQ=255) gCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCt > 1:3347589/1‑150 (MQ=255) cAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCttt < 2:4321298/150‑1 (MQ=255) gCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGa < 1:3187343/150‑1 (MQ=255) tCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGAtt > 1:688171/1‑150 (MQ=255) tCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGa < 1:3327140/150‑1 (MQ=255) aTCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATa < 2:4680016/150‑1 (MQ=255) aGCGCTCTCGATAGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCAATTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACt < 2:5132263/150‑1 (MQ=255) gcgcTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTg > 2:2806055/1‑129 (MQ=255) gcgcTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTg < 1:2806055/129‑1 (MQ=255) tctcGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTGTGATTGTGATAGCACTAC‑aaa > 2:5399457/1‑150 (MQ=255) ctcGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaa < 1:3218606/150‑1 (MQ=255) tcGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaa > 2:660512/1‑150 (MQ=255) tcGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaa > 1:3142432/1‑150 (MQ=255) cGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaa < 1:4289587/150‑1 (MQ=255) gTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaaa < 2:1037895/150‑1 (MQ=255) gAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaaaaaaa < 1:4605822/150‑1 (MQ=255) aGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAg > 1:5357357/1‑150 (MQ=255) ccACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACATTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGccc < 2:4960899/150‑1 (MQ=255) ccACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaaaaaaaagcc > 1:1451726/1‑146 (MQ=255) cACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAATAAAATAGCCCg > 2:937559/1‑150 (MQ=255) gatgagatgaATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATTGCACTAC‑‑AAAAAAAAAAGCCCGCCTa < 1:3524539/150‑1 (MQ=255) gatgagatgaATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCt > 2:3504466/1‑150 (MQ=255) tgagatgaATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑‑AAAAAAAAAAGCCCGCCTaaa < 1:2109538/150‑1 (MQ=255) atgaATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGc > 1:140739/1‑150 (MQ=255) gaATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCgg > 1:5304849/1‑150 (MQ=255) taaatgCCCGCGCCGGAGACCGGTGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAATCCCGCCTAAAGGCggg > 1:1563952/6‑150 (MQ=255) aaTAAGCCCGCACCGGTCTCCGGCGCGGTCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCTAAAGTACGTCCTTGTGAACTGATGACAGATTATTGTCTTTTATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCggg < 1:1104696/150‑1 (MQ=255) aaTAAGCCCGCACCGGTATCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCggg < 2:412116/150‑1 (MQ=255) aaGCCCGCGCCGGAGACCGGTGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑a > 2:4651814/1‑120 (MQ=255) aGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACTGTATCTGCCCCGAAAGTACGTCCTGGTGAAGTGATGACAGCGTCTTGGCTTGGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTTTAGGCGGGCttt < 2:3418513/150‑2 (MQ=255) gCCCGCGCCGGAGACCGGTGCGGGCTTTTACTTTCCGGGCCTTGGACCGTAGCTGACCCGAAAGGACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTACAAAAAAAAAAAAGCCCGCCGAACGGCGGGCGTa > 2:3560139/1‑150 (MQ=255) gCCCGCGCCGGAGACCGGTGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGa > 2:1628986/1‑108 (MQ=39) gCCCGCGCCGGAGACCGGTGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGa < 1:1628986/108‑1 (MQ=39) gCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAACGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTCC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaa > 2:1929835/1‑150 (MQ=255) ccGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTTTAGGCGGGCtttttt < 1:4978698/150‑5 (MQ=255) ccGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaaaa > 2:1319243/1‑150 (MQ=255) ccGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaaaa < 1:3829771/150‑1 (MQ=255) aCCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGaa < 1:4550771/150‑1 (MQ=255) | ACTCACCCGTAGCCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGCCCGCACCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAA > NC_002947/5020630‑5020928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |