| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,089,637 | G→C | 6.4% | intergenic (‑375/+10) | alaS ← / ← astE | alanine‑‑tRNA ligase/succinylglutamate desuccinylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,089,637 | 0 | G | C | 6.4% | 445.1 / 2.0 | 143 | intergenic (‑375/+10) | alaS/astE | alanine‑‑tRNA ligase/succinylglutamate desuccinylase |
| Reads supporting (aligned to +/- strand): ref base G (120/12); new base C (3/8); total (123/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GAACAGGCGGTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCA > NC_002947/5089489‑5089786 | aaCAGGCGGTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGac > 2:1746087/1‑150 (MQ=255) cAGGCGGTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGGAAACCCGCTCCGACGGGCACCG‑CACCCCATTGAGACCATGCACAAAACTAGTAGGAGCGGGGG‑CACCCA‑CCAAACAGGCGacac > 1:4418841/1‑150 (MQ=255) aGGCGGTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACAcc > 2:2448372/1‑150 (MQ=255) gCGGTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTGGGAGCGGGGT‑GACCCG‑CGAAAGAGGCGGCACCGc > 2:248169/1‑150 (MQ=255) ggTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGctc > 1:3249692/1‑150 (MQ=255) ggTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCAGTTTCGCGGGTAAACCCGCGCCAACGGGCACGG‑CACCACATTTAGACCATGCACAAATAACGTAGGAGCGGGGT‑CACCCA‑CCAAACAGGCGACAccccac > 1:1724001/1‑146 (MQ=255) gTGAAATAAAGGGTATTCATCAAGGATAGGATCCGAAACTGTGTCGCCTTTTTCGCGGGTAAACCCCCTCCTACCGGCACCC‑CACCACAAAGAGAACTTGCACAAAACACGTAGGACCCGGGT‑CACCCA‑CGAAAAAGGCGACACCGctca > 2:1980726/1‑149 (MQ=255) tGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCtctc > 2:558245/1‑150 (MQ=255) ttAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCCCACCAAAGGGCACCG‑CACCACAATGAGACCATGCACATAACACGAAGGAGCGGGGT‑CACCCA‑CCAAACACGCGACACCCCACTCAccc > 1:4091347/1‑150 (MQ=255) aaaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCACTCACCCCa > 2:1643877/1‑150 (MQ=255) aaaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCGGTTTCGCGGGGAAACCCCCACCAACCGGCCCGG‑CCCCCCAAAGAGAACTTGCACATAACACCTAGGCGCGGGGT‑CACCCA‑CCAAACACGCGACACCCCACACAccccc > 1:4299665/1‑149 (MQ=255) aaaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCGGGTTCGCCGGTAAACCCCCACCAACCGGCACCG‑CACCACAATGAGACCGTGCACAAAACACGTAGGAGCGGGGT‑CACCCA‑CCAAACACGCCACACCCCACACAccccc > 1:1462337/1‑149 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAg > 2:4614774/1‑150 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAg > 2:4614818/1‑150 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAg > 2:4782957/1‑150 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAAACCGCTCCTACGGGCACGG‑CACCACATTGAGAGCTTGCAGATATATCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAg > 2:2385310/1‑150 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAAACCGCTACTACGGGCACGG‑CACCACATTGAGACCATGCACATAAATCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGAAACCGCTCTCACCCCAg > 1:5628912/1‑150 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGGAAACCCCCGCCGACCGGCACGG‑CCCCACCATGAGACCGTGCACAAATCACGGAGGAGCGGGGT‑CACCCA‑CCAAACACGCCACCCCCCGCACAcccccc > 1:4068474/1‑148 (MQ=255) aaGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCAGTTTCGCGGGTAAAACCCCTCCTAACGGCACCG‑CACCACCATGAGACCTTGCACAAATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCACACACCCCAg > 2:215279/1‑150 (MQ=255) aGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCCCGCTCACCCCAgg > 1:1375590/1‑150 (MQ=255) ttttCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCCGGCGCt > 2:2023388/1‑150 (MQ=255) ttCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTAGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTTAGACCTTGCACATATCTCGTAGTAGCGGGGT‑CAACCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGc > 2:1166843/1‑150 (MQ=255) tcatcaAGGATAGGATCCGAAACTGTGTCGCCGGTTTCGCGGGGAAAACCCCTCCAACCGGCACGG‑CACCACAATGAGACCGTGCACATATCTAGGAGGAGCCGGGG‑CACCCA‑CCAAACACGCGACACCCCGCACACCCCACGCGCTGcc > 1:1698248/1‑150 (MQ=255) catcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGGAAACCCGCGCCTACGGGCACGG‑CACCACATTGAGACCGTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGccc > 1:1778356/1‑150 (MQ=255) atcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCAGcccc > 2:5148593/1‑150 (MQ=255) tcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCGTGCACATATCTCGTAGGAGCGGGGG‑CACCCA‑CGAAAAAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑g > 1:1796090/1‑150 (MQ=255) tcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACAATGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCCGGCGCTGCCCC‑g > 2:622027/1‑150 (MQ=255) aaGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCATGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑Gaa > 1:4142533/1‑150 (MQ=255) gatCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCAc > 2:3521410/1‑150 (MQ=255) gatCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAAACCGGCAc > 2:2886602/1‑150 (MQ=255) gatCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCCACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCAc > 2:2886540/1‑150 (MQ=255) gatCCGAAACTGTGTCGCCAGTTTCGCGGGTAAACCCCCTCCGACCGGCACGG‑CACCACATATACACCTTTCACATATATCGTAGGAGCGGGGT‑GACCCA‑CGCAACAGGCGACACCGCGCTCACCCCAGGCGCTGCCCC‑GGATCCGGCAc > 1:3534425/1‑150 (MQ=255) atCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCCCAATGAGACCTTGCACAAAACTAGTAGGAGCGGGGG‑CACCCA‑CGAAACAGGCGACCCCGCGCTCACCCCAGGCGCTGCCCC‑GCATCCGGCACg > 1:446981/1‑150 (MQ=255) tCCGAAACTGTGTCGGCTGGTTCGCGGGTAAACCCCCGCCGACGGGCACGG‑CCCCACAGTGGGACCGTGCACATAGCTCGTAGGAGAGGGGG‑GACCCC‑CGCAACAGGCGACACCGCGCTCACCCCAGGCGCTGCCCC‑GAATCCCGCACGa > 1:1265316/1‑150 (MQ=255) tCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGa > 2:4054787/1‑150 (MQ=255) tCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑CAATCCGGCAcca > 2:1393665/1‑148 (MQ=255) gAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCCCTGCCCC‑GAATCCGGCACGATCa > 2:4185363/1‑150 (MQ=255) gAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCGACCGGCACGG‑CACCACAATGAGACCGTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACACGCGACACCCCACTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCa > 2:2632634/1‑150 (MQ=255) gAAACTGTGTCGCCTGTTTCGCGGGTAAACCCCCTCCTACGGGCACGG‑CCCCACATTGAGACCGTGCCCATATCTCGTAGGAGCGGGGT‑CCCCCA‑CGAAACAGGCGACACCGCACTCACCCCAGGCGCTGCCCC‑GAATACGGCACGATCa > 1:1323365/1‑150 (MQ=255) tgtgTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGCAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGCTCAGAATg > 2:3362626/1‑150 (MQ=255) gtgtCGCCTTTTTCGCGGTTAACCCCGCGCCTCGGGCCCCGC‑CACCACATTCCCCCCTTGCAATTTCCCCGTCGGTGGGGGGC‑CACCCA‑CCAAACCGGCCCCACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGc < 2:2747274/150‑1 (MQ=255) gCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGgcg > 1:2558968/1‑150 (MQ=255) tttCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCaa > 1:1357993/1‑150 (MQ=255) cgGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGt > 1:2715812/1‑150 (MQ=255) gggTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGtt > 1:3491431/1‑150 (MQ=255) gggTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGtt > 1:3491646/1‑150 (MQ=255) gggTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGtt > 1:3491627/1‑150 (MQ=255) gggTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGtt > 1:5493697/1‑150 (MQ=255) gtaacccccGCTCCT‑CGGGCCCGGCCCCCACTTGGCGACGTTCAAAATTTCTCGTAGGGGGGGGTA‑CCCCAA‑CCAACCCGGCCACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTc < 2:1323365/144‑1 (MQ=255) gtaacaCCCCCACCTGCGGCCCCGC‑CACCACCCTCAGCCCTGCCACATATCTCTTTGGCGGGGGGC‑CACCCA‑CCAAACCGGCGCCACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTc < 2:4317904/145‑1 (MQ=255) ggTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTc > 2:1864039/1‑150 (MQ=255) tAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCtt > 1:3130760/1‑150 (MQ=255) cccGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGTGCGCAAGCCGTTCTTGAcc > 1:2374031/1‑150 (MQ=255) cccGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGAcc > 2:336295/1‑150 (MQ=255) ccGCTCCTCCGGGCACGG‑CACCACATTGAGACCGTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GACTCCGGCACGATCAGAATGCCGGCGCGCCAGCCGTGCTGGAccg > 2:599883/1‑149 (MQ=255) gCTCCTCGGGGCCCGC‑CACAACATTGAGCCCTGCCAATTTTCGCGTCGGCG‑GGGGT‑CCCCCACCTAAACTGGCGCCACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttg < 2:2690677/150‑1 (MQ=255) tACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCTGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggt > 2:2570622/1‑150 (MQ=255) tACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggtt > 1:827056/1‑150 (MQ=255) tACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggtg > 2:3272299/1‑149 (MQ=255) ggcccgc‑cacCACCTTGAGCCCTGGACCTTATCTGGGGGGTGGGGGGC‑CCCCCA‑CGAAACGGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttgggg < 2:3889311/150‑1 (MQ=255) accacATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAgatgat > 1:1202298/1‑150 (MQ=255) acaTTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATgcg > 2:2103845/1‑150 (MQ=255) acaTTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATgcg > 1:89812/1‑150 (MQ=255) acaTTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATgcg > 2:2103926/1‑150 (MQ=255) ttGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGGTGATgcgcgc > 2:1863166/1‑150 (MQ=255) gaccccTTCCAAATATCTCTTCGGCGGGGGCA‑CCCCAA‑CCAACCCGGCCACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCAc < 2:3464859/146‑1 (MQ=255) agaCCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCAcc > 1:3699852/1‑150 (MQ=255) gCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACcctcctcc > 1:274362/1‑150 (MQ=255) cacaTATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACcctcctcct > 2:5419889/1‑150 (MQ=255) acaTATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCctcctcctc > 1:2029334/1‑150 (MQ=255) atatCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGa > 2:3254267/1‑150 (MQ=255) tatCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGac > 1:1488396/1‑150 (MQ=255) atCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGacc > 1:5035488/1‑150 (MQ=255) tctcGTTGGTGGGGGTA‑CACCCA‑CGAAACTGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGacca < 2:4135052/150‑1 (MQ=255) tctcGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGacca > 2:24002/1‑150 (MQ=255) tctcGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGacca > 1:3077151/1‑150 (MQ=255) tcgcGTTGGTGCGGGGA‑CACCAA‑CTAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGacca < 2:4134914/147‑1 (MQ=255) tcGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGaccacc > 1:4019025/1‑150 (MQ=255) tcGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGaccacc > 1:949252/1‑150 (MQ=255) gTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCa > 2:307657/1‑150 (MQ=255) ggcgggggTCCACCCA‑CTAAACTGGCCACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAgcg < 2:4715110/146‑1 (MQ=255) ggggggC‑CACCAA‑CTAACCGGGCCACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCAt < 2:1724001/148‑1 (MQ=255) gCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCa > 2:5622672/1‑144 (MQ=255) cGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCAtc > 1:1333604/1‑150 (MQ=255) gggT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCAtctc > 2:3658587/1‑150 (MQ=255) ggT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCg > 1:825037/1‑150 (MQ=255) cACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGcc > 1:3307322/1‑150 (MQ=255) aCCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCa > 1:5200615/1‑150 (MQ=255) aCCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCa > 2:2152666/1‑150 (MQ=255) cccA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAg > 1:4698686/1‑150 (MQ=255) cA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGt > 2:2825454/1‑150 (MQ=255) a‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTc > 2:319131/1‑150 (MQ=255) a‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTc > 1:4914807/1‑150 (MQ=255) caaaCCGGCCACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCtt < 1:5546007/149‑1 (MQ=255) aaCCGGCGACTCCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTca < 2:1893434/150‑1 (MQ=255) aaCAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTca > 1:59308/1‑150 (MQ=255) gCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTcagccag > 1:1287037/1‑150 (MQ=255) gCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTcagccag < 2:1287037/150‑1 (MQ=255) gACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagca > 1:5338133/1‑150 (MQ=255) gACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagca > 1:771022/1‑150 (MQ=255) | GAACAGGCGGTGAATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGG‑CACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCA‑CGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCC‑GAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCA > NC_002947/5089489‑5089786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |