| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,097,574 | G→C | 6.4% | intergenic (‑273/+64) | astC ← / ← PP_4482 | acetylornithine aminotransferase/AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,097,574 | 0 | G | C | 6.4% | 739.2 / 30.3 | 219 | intergenic (‑273/+64) | astC/PP_4482 | acetylornithine aminotransferase/AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (102/103); new base C (6/8); total (108/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
CAAGGCTTTCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGTTGCACCAA > NC_002947/5097425‑5097723 | cAAGGCTTTCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTgg < 1:3375867/150‑1 (MQ=255) aaGGCTTTCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTggg > 1:4434906/1‑150 (MQ=255) aaGGCTTTCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTggg > 2:2650981/1‑150 (MQ=255) ggCTTTCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGggcg > 1:3509302/1‑150 (MQ=255) tttCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGgcggcg > 2:576229/1‑150 (MQ=255) tCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCt > 1:928440/1‑150 (MQ=255) tCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCt < 1:2650981/150‑1 (MQ=255) tCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCCCACGCGGCGCt < 2:2243010/150‑1 (MQ=255) cGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTc < 2:2088801/150‑1 (MQ=255) ggCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCg > 1:779568/1‑150 (MQ=255) aaTGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGAtt > 1:1142204/1‑150 (MQ=255) gCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTgc < 2:3366121/150‑1 (MQ=255) gACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTgcgc < 2:585354/150‑1 (MQ=255) cTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAacac < 2:304492/150‑1 (MQ=255) tCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCaa > 2:4466355/1‑150 (MQ=255) tCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCaa > 1:2866874/1‑150 (MQ=255) aaTCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAAcccc > 1:745748/1‑150 (MQ=255) cgcgCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAg < 1:3657584/150‑1 (MQ=255) gcgcAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCCCACGCGGCGCt > 2:3134532/1‑121 (MQ=255) gcgcAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCCCACGCGGCGCt < 1:3134532/121‑1 (MQ=255) cgcAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGc > 2:2304609/1‑150 (MQ=255) aGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATa > 2:3427703/1‑150 (MQ=255) gtgtACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATac < 2:3128375/150‑1 (MQ=255) tACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACAcc > 2:3841941/1‑150 (MQ=255) aCGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGATGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACAccc < 1:5243547/150‑1 (MQ=255) ggAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGa < 1:136937/150‑1 (MQ=255) gagagaGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGaa > 2:3593487/1‑150 (MQ=255) gagagaGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGaa < 2:5020375/150‑1 (MQ=255) cgcgagGGGGCTGGGAGCACGGGCGCGCACACCGGCATGTGCGGCGGCAGGCTGCACGGCGAAGAGGACGGGGGGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAac < 2:3217618/147‑1 (MQ=255) agagagGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAac > 1:1757355/1‑150 (MQ=255) gagGGGGCTGGGTGAACGGGTGCTCACACAGGTTTGTGAGGGGGCTGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAaccca < 1:577956/150‑1 (MQ=255) agGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAacccac < 1:535686/150‑1 (MQ=255) ggggCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAacccaccc < 2:928440/150‑1 (MQ=255) ggggCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAacccaccc > 1:2408173/1‑150 (MQ=255) ggCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGa > 1:1907354/1‑150 (MQ=255) gCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGaa > 1:980632/1‑150 (MQ=255) cTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGaaa < 1:4384648/150‑1 (MQ=255) cTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGaaa < 2:846293/150‑1 (MQ=255) tGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAAt < 1:4494700/150‑1 (MQ=255) tGACCGGGGGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGGTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCa < 1:4617140/150‑1 (MQ=255) tGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCa < 2:2084874/150‑1 (MQ=255) gAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAg < 2:5231016/150‑1 (MQ=255) aaCGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAAt < 2:1116801/144‑1 (MQ=255) aCGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGcc > 2:4042534/1‑150 (MQ=255) tGCTCACACAGGATGGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCtttt < 2:1646353/150‑1 (MQ=255) cTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCa > 1:2497453/1‑150 (MQ=255) cTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCa < 1:2552541/150‑1 (MQ=255) tCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAg > 1:3996030/1‑150 (MQ=255) tCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAg > 2:1454904/1‑150 (MQ=255) tCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAg > 1:5526353/1‑150 (MQ=255) acacaGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGcc < 2:3105006/150‑1 (MQ=255) acacaGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGcc > 2:2361723/1‑150 (MQ=255) cacaGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCg > 1:5278112/1‑150 (MQ=255) acaGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCgg > 2:5379405/1‑150 (MQ=255) caGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGgc > 2:1166683/1‑150 (MQ=255) gATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCttt < 2:376861/138‑1 (MQ=255) ttGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGa < 1:4079220/150‑1 (MQ=255) gggggCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCaa < 1:1417065/150‑1 (MQ=255) gCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCa > 2:4033157/1‑150 (MQ=255) gCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCa > 2:2600737/1‑150 (MQ=255) aGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCaaa < 1:2186441/150‑1 (MQ=255) gATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACg > 1:3265301/1‑150 (MQ=255) gTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGgc < 1:2684592/150‑1 (MQ=255) cGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGgctgc < 1:1612765/150‑1 (MQ=255) ggCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGgctgct > 1:5216934/1‑150 (MQ=255) ggCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGgctgct > 1:1296767/1‑150 (MQ=255) gCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGgctgctg < 1:1671666/150‑1 (MQ=255) gATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGgctgctgct < 1:1506981/150‑1 (MQ=255) tGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCtgctgctgc < 1:4150553/150‑1 (MQ=255) gTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCg > 2:2463041/1‑150 (MQ=255) ttgtgTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGc < 1:3789862/149‑1 (MQ=255) tgtgTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCt > 2:885217/1‑150 (MQ=255) tgtgTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCt < 2:5248833/150‑1 (MQ=255) tgtgTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCt > 1:2388495/1‑150 (MQ=255) gtTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCACACGGGCTGCTGCTGCGACGCTGAt > 2:1829532/1‑150 (MQ=255) ttGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGAtt > 2:2568495/1‑150 (MQ=255) gACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGc > 1:1297607/1‑150 (MQ=255) ccGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg < 2:5125487/149‑1 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCCGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg > 1:1107581/1‑150 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg < 1:509141/150‑1 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg < 1:4808934/150‑1 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg < 1:3346975/150‑1 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg < 1:4680482/150‑1 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg < 1:2271188/150‑1 (MQ=255) aCGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTGTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCg > 2:5031815/1‑150 (MQ=255) gggAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTc < 2:2153226/150‑1 (MQ=255) gggAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCGCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTc > 2:5548868/1‑150 (MQ=255) agaTCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTc < 1:4085649/150‑1 (MQ=255) tCGAGCGCCGCCCACGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAAtt < 1:4683236/110‑1 (MQ=255) tCGAGCGCCGCCCACGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAAtt > 2:4683236/1‑110 (MQ=255) cGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCcgc > 1:298710/1‑150 (MQ=255) gAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCGCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCcgcg > 2:3564556/1‑150 (MQ=255) gccgcGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGt > 1:1384694/1‑150 (MQ=255) gccgcGTGGGCGGCGCTCGAGTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGt > 2:5592711/1‑150 (MQ=255) ccgcGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCCAGGCATACACCCCGAACCCACCCGAACTCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGtt < 2:4087333/150‑1 (MQ=255) ccgcGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGtt < 1:2214241/150‑1 (MQ=255) gcgTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGTTGc < 1:2307457/150‑1 (MQ=255) cgTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGTTGCa < 2:4110817/150‑1 (MQ=255) ggcggcGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGTTGCACCaa > 1:4846091/1‑150 (MQ=255) ggcggcGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGTTGCACCaa > 1:4966102/1‑150 (MQ=255) | CAAGGCTTTCGGCAATGCGACAAACACTGTCGCAATCGCGCAGTGTACGGGAGAGAGGGGGCTGGGTGAACGGGTGCTCACACAGGATTGTGAGGGGGCAGGATGTACGGCGATGTTGATGTGTTGACGGGGAGATCGAGCGCCGCGTGGGCGGCGCTCGATTTGCGCCCCAACACCAACCCCAAGGCATACACCCCGAACCCACCCGAAATCTCAGCCCTTTTCAGCCGGCGCCGAGCTCAATTCAAACGGGCTGCTGCTGCGACGCTGATTGCGGTCTTCCCGCGGCGTTGCACCAA > NC_002947/5097425‑5097723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |