| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,104,932 | T→G | 10.0% | intergenic (+21/+132) | PP_4488 → / ← phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,104,932 | 0 | T | G | 10.0% | 328.8 / 10.5 | 138 | intergenic (+21/+132) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (26/95); new base G (10/7); total (36/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 140 total aligned reads displayed.
TATTTCCATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTT > NC_002947/5104785‑5105081 | tATTTCCATGAGCGAAGTGCCCACTGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGc < 2:3883978/150‑1 (MQ=255)tATTTCCATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGc < 1:3419187/150‑1 (MQ=255) tttCCATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCcggcgg > 1:2934913/1‑150 (MQ=255) ccATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGcc < 1:1539267/150‑1 (MQ=255) cATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTCCGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGccc < 2:3365652/150‑1 (MQ=255) cATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGccc < 2:3332550/150‑1 (MQ=255) cATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGccc < 2:1388743/150‑1 (MQ=255) cATGAGCGAAGGGCCCAAGGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCCGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGccc < 2:5419659/150‑1 (MQ=255) aTGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGcccc > 1:5541835/1‑150 (MQ=255) aTGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGCAGGGcccc < 2:2392683/150‑1 (MQ=255) tGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCAGGGGCCCGCAGGGccccc < 2:3042917/150‑2 (MQ=255) aGCGAAGTGCCCAATGTGTGCTAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGCAGGGcccccga < 2:2929276/150‑4 (MQ=255) aGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTAt < 1:3045743/150‑1 (MQ=255) aGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTAt > 2:4795898/1‑150 (MQ=255) aGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTAt < 1:3045790/150‑1 (MQ=255) gCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATc < 2:5549947/150‑1 (MQ=255) cGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGcccccgatt < 1:820306/150‑6 (MQ=255) cGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGcccccgatt < 1:2517589/150‑6 (MQ=255) aaGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGGGCTGCGGGCCCCTATcgcg > 2:218940/1‑150 (MQ=255) aGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGa < 2:4488465/150‑1 (MQ=255) tGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGaca > 2:2990987/1‑150 (MQ=255) gCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCGAAAGCGacac > 2:1020633/1‑150 (MQ=255) cccAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCGATCGCGAcaca > 2:280093/1‑150 (MQ=255) ccAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACaa < 1:3893993/150‑1 (MQ=255) aaTGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAgg < 2:573887/150‑1 (MQ=255) aaTGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAgg < 2:3560615/150‑1 (MQ=255) aGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCcaca < 1:1322192/150‑1 (MQ=255) tCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAgg < 1:3556149/150‑2 (MQ=255) gCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt < 1:3994163/150‑1 (MQ=255) cccGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGTAATACGCt < 1:2095021/150‑1 (MQ=255) cGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCa < 2:4150288/150‑1 (MQ=255) cATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGc < 1:1185570/150‑1 (MQ=255) cATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGc < 1:1185636/150‑1 (MQ=255) cATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGc < 2:702599/150‑1 (MQ=255) cATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCGCCCACAGATAATgcgcgccgc > 2:1748478/1‑145 (MQ=255) cATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATAGCGACACAAGGCCGCTCCCACACATAATTCGCTCAGc > 1:1814704/1‑150 (MQ=255) tGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCa < 2:4016685/150‑1 (MQ=255) gACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCag < 2:4973712/150‑1 (MQ=255) gACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCag < 1:2840442/150‑1 (MQ=255) aCCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCaga < 2:624252/150‑1 (MQ=255) aCCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCaga < 1:5291324/150‑1 (MQ=255) ccTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCagag < 1:5370921/150‑1 (MQ=255) cTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACACATAATGCGCGCCGCCAGAGc > 2:1143239/1‑150 (MQ=255) cTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGAGGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCGATCGCGCCCCAAGGCCCCGCCCCCGGCGAAGGCGCGCCGCCCGAGc > 2:4358479/1‑150 (MQ=255) tACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGca < 2:3285245/150‑1 (MQ=255) tACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGca < 2:3285491/150‑1 (MQ=255) tACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATAGCGACACAAGGCCGCACCCACAGAAAATGCGCTCAGCCAGAGca > 2:2963531/1‑150 (MQ=255) cGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGcaca < 1:322853/150‑1 (MQ=255) aGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCCCAGATAAAGCGCTCAGCCCGAGCACAGc > 2:2093444/1‑150 (MQ=255) aGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGc < 2:1619075/150‑1 (MQ=255) aGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCAATCGCGACACAAGGCCGCTCCCACAGATAAAGCGCTCAGCCAGAGcacacc > 2:2093512/1‑148 (MQ=255) aCTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTa < 2:4080308/150‑1 (MQ=255) cTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTAt < 1:3688252/150‑1 (MQ=255) tCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGGCCTGCGGGCCCCTATCGCGTGAAAATGCCGCGCCCACAGATTATTGGCTCAGGCAGAGCACAGGGTAtt > 2:2563815/1‑150 (MQ=255) ccAGGGCCAGAAGCACAGTCTCGAAGACCGCGTGAGGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAc < 2:5572330/150‑1 (MQ=255) aGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTTATTCCTTTGAATCGGGGGCCCTGCGGGCCCCTATCGCGACCCAAGGCCGCTCCCACAGATTATGCGCTCAGCCAGAGCTCAGCGTATTACCt < 1:2367553/150‑1 (MQ=255) aGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCt > 2:779198/1‑150 (MQ=255) aGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCt < 1:804985/150‑1 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:4411745/150‑1 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:4411741/150‑1 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 2:5003996/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 2:3194141/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg > 2:2724682/1‑150 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACCCAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 1:459183/150‑1 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 1:2628282/150‑1 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCAGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 2:570775/150‑1 (MQ=255) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGGTAATACGCTGTGCTCTGGCTGAGCGCATTATCTGTGGGAg < 1:2602640/150‑1 (MQ=21) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAg < 1:3383122/150‑1 (MQ=255) aaGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc < 1:3794102/150‑1 (MQ=255) aaGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc < 1:1020633/150‑1 (MQ=255) gCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCgg < 1:4135012/150‑1 (MQ=255) acaTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGAAACAAGGCCGCTCCCACCGATAATGCGCACAGCCAGAGCACAGCGTAGTACCAGTGGGAGCGGcc > 2:3427302/1‑150 (MQ=255) caTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCt < 1:5320508/150‑1 (MQ=255) aTTCTCGAATACCGCGTGATGGGGAACGGCTTCTCCATAGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCtt < 2:3158832/150‑1 (MQ=255) tctcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCTATCGCGCCACAAGGCCCCACCCCCCGATAAAGGGGGCAGCCCGAGCACAGCGGATTAACAGTGGGGGGGGccgttt > 1:3146281/1‑146 (MQ=255) ctcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCTTTTTACCTGTGGGAGCGGCCTtgtg < 1:1677322/150‑1 (MQ=255) tcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCAGTGGGAGCGGCCTTgtgt > 2:5511625/1‑150 (MQ=255) aaTACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTcgc < 1:4764871/150‑1 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGGTAATACGCTGTGCTCTGGCTGAGCGCATTATCTGTGGGAGCGGCCTTGTGTCGCGATAg < 2:4671106/150‑1 (MQ=17) gAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGGCACAACGCCGCGCCCCCACATAATTCGCTCAGCCCGGGCACAGCGGATTAACAGTGGGGGGGGCCGTGTGTCGCGAAAGGGCTGCAACGc > 2:1920695/1‑150 (MQ=255) cGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGt < 2:395790/150‑1 (MQ=255) ctgctCCACCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCCCCCACATATAATGCGCTCAGCCAGACCACAGCGTATTACCTGGGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTccc < 1:4549981/150‑1 (MQ=39) ctgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTccc < 2:4514771/150‑1 (MQ=255) ctCCAACGGCTGACACAATGCAATCGGGGCCCCTGCGGGCCCCAAACCCCACCCACGCCCGCTCCCACAGATAATCCGCACACCCAGACCACACCGTATTACCTGTGGCAGCGCCCTTGTGTCGCGAAAGGACTCCAACGCAGTcctttc < 2:188767/150‑5 (MQ=255) gccACCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACACGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCGTTGCAGTcctttcg < 2:1794094/149‑6 (MQ=38) ccAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCAAACGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGGATTACAGGTGGGGGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGtt > 2:4425656/1‑150 (MQ=39) aaCGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt < 1:1832902/150‑1 (MQ=255) aCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCtt > 2:4685451/1‑150 (MQ=255) cGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACCAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt < 2:582590/150‑1 (MQ=255) cGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt < 2:3099454/150‑1 (MQ=255) cTTGGATTCGGGGGCCCTGGGGGCCCCTATCGCGACACACGGCGGCTCCCACCGATACTGCGCTCAGCCAGAGCACTGGGTATTACGTGTGGGCGGGGCGTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCaacaac < 1:3624968/150‑1 (MQ=255) ttGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGGATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACAGCAACGCCGTCCCAGGTTCTTTGACCAACAACt > 2:5536453/1‑150 (MQ=255) cGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATccgc < 2:4357466/150‑1 (MQ=255) gggggCCCTGCGGGCCCCTATCGCGCCACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATccgcc < 2:5238670/150‑1 (MQ=255) ggggCCCTGCGGGCCCCTATCGCGTCACAAGGCCGCTCCCACAGATAAAGCGCTCAGCCCGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCCACAACTAATccgccg > 2:2116459/1‑150 (MQ=255) ggCCCTGGGGGCCCCTATCGCGACACACGGCCGCTCCCACAGATATTGCGCTCAGCCAGAGCACAGCTTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGAc < 1:4434759/150‑1 (MQ=255) gCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACt > 2:3741742/1‑150 (MQ=255) gCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACt > 2:3741701/1‑150 (MQ=255) cccTGCGGGCCCCTATCGCGACACACGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGTGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACtt < 1:5505513/150‑1 (MQ=255) cccGGCGGGCCCCTAGCGCGCCACCCGCCCGCTCCCCCCGATAATGCGCTCAGCATGCGCACTGCTTATTACGTGTGGGCGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACtt < 1:4795898/150‑1 (MQ=255) | TATTTCCATGAGCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTT > NC_002947/5104785‑5105081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |