| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,123,192 | T→G | 5.8% | intergenic (+27/‑32) | PP_4504 → / → PP_4505 | hypothetical protein/sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,123,192 | 0 | T | G | 5.8% | 620.8 / 18.7 | 183 | intergenic (+27/‑32) | PP_4504/PP_4505 | hypothetical protein/sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base T (89/82); new base G (5/6); total (95/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
AAGTTGCTCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGCCTGGATCCTCA > NC_002947/5123043‑5123341 | aaGTTGCTCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCAt < 1:392340/150‑1 (MQ=255) gTTGCTCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCa > 2:5112385/1‑150 (MQ=255) gCTCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACtt < 1:1240363/150‑2 (MQ=255) cTCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGc < 1:4939368/150‑1 (MQ=255) tCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGcg > 1:2309810/1‑150 (MQ=255) tCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGcg > 2:386002/1‑150 (MQ=255) cACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGcgg > 1:3349507/1‑150 (MQ=255) cTGACCAGGAGAAGAATTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAACTCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCGCGGCCCGCAGTGATGcgggccgg < 2:3081501/150‑1 (MQ=255) cTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCAGTGATGcgggccgg < 2:3897679/150‑1 (MQ=255) cTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCAGTGATGcgggccgg < 2:3081444/150‑1 (MQ=255) aCCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCt < 2:4940033/150‑1 (MQ=255) ccAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCtt < 1:5371617/150‑1 (MQ=255) gcagAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTc < 2:3621341/150‑1 (MQ=255) cagAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTcc > 1:1038250/1‑150 (MQ=255) gaagaaGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTATCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCg < 1:4043415/150‑1 (MQ=255) gaagTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGttt > 1:3141308/1‑150 (MQ=255) aagTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTa < 1:3085795/150‑1 (MQ=255) aagTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTa < 2:5451816/150‑1 (MQ=255) tttGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTagga > 2:5482016/1‑150 (MQ=255) ttGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTaggag < 1:4923710/150‑1 (MQ=255) aCGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTg < 2:796524/150‑1 (MQ=255) gAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCa > 2:4917172/1‑150 (MQ=255) aaCTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCAc < 2:2375216/150‑1 (MQ=255) cTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGCAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACtt < 2:3809329/150‑1 (MQ=255) cTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACtt < 2:2817356/150‑1 (MQ=255) tGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTG‑AAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGc > 1:1442104/1‑150 (MQ=255) gCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGc < 1:458308/150‑1 (MQ=255) gCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGGTTAGGAGGTGCACTTGc > 1:3946226/1‑150 (MQ=255) aaaaaGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGt > 2:5189918/1‑150 (MQ=255) aaaaaGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGt > 1:590081/1‑150 (MQ=255) aaaaaGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGt > 2:5191402/1‑150 (MQ=255) aaaaaGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCAACACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGt > 1:4076393/1‑150 (MQ=255) aaaaGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGtt < 2:3475326/150‑1 (MQ=255) aaaaGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGtt < 1:4824547/150‑1 (MQ=255) gAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACt < 1:1158409/150‑1 (MQ=255) cgcgCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGtt < 1:2796887/150‑1 (MQ=255) gcgcCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTc < 2:844374/150‑1 (MQ=255) gccgccAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTg > 2:4557753/1‑150 (MQ=255) ccgccAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTgg < 2:1599608/150‑1 (MQ=255) cgccTAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGgc < 2:3204814/150‑1 (MQ=255) ccAAGACAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGgcgc < 1:1136927/150‑1 (MQ=255) ccAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCTCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGgcgc < 1:4533353/150‑1 (MQ=255) cAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGTCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCa > 1:776932/1‑150 (MQ=255) cAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCa < 1:981519/150‑1 (MQ=255) aaGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCAt > 1:2433391/1‑150 (MQ=255) aaGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGGTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCAt > 1:2893010/1‑150 (MQ=255) gAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATcc > 1:2934313/1‑150 (MQ=255) gCCGAGTGGCCGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGc < 2:4299662/150‑1 (MQ=255) gCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGc < 2:4016877/150‑1 (MQ=255) ccGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGcc > 1:2283027/1‑150 (MQ=255) cGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCa < 1:218694/150‑1 (MQ=255) tGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGttt < 2:5463214/150‑1 (MQ=255) gCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCAAGCCCGGCCCGCAGTGATGcgggccgggcat > 2:4096486/1‑91 (MQ=37) gCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCAAGCCCGGCCCGCAGTGATGcgggccgggcat < 1:4096486/93‑3 (MQ=37) cAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctg > 1:1899104/1‑150 (MQ=255) cAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctg < 1:3894250/150‑1 (MQ=255) aGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctgg > 1:877629/1‑150 (MQ=255) aGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctgg < 2:1414136/150‑1 (MQ=255) aGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctgg > 2:3396526/1‑150 (MQ=255) ggAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctggc > 1:2988855/1‑150 (MQ=255) ggAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGGTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctggc > 2:502560/1‑150 (MQ=255) gAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctggct > 2:1692487/1‑150 (MQ=255) gAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTctggct > 2:2592561/1‑150 (MQ=255) ttCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTGAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCtggctggc > 2:4866098/1‑150 (MQ=255) ccAGGCCTGGACAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCCGGCTTTGCCCGGGTAGGAGGTGCACTTGCGTTCACTGGTCTGGCGCATCCTGGCCAGTTTCGGGCTGGCCa > 2:4250840/1‑150 (MQ=255) aGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATc > 2:939538/1‑150 (MQ=255) aGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATc > 1:5389573/1‑150 (MQ=255) cTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCaggatgc < 1:2661612/150‑7 (MQ=255) cTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCAccc > 1:2050408/1‑150 (MQ=255) tGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCt > 2:183860/1‑150 (MQ=255) aggAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGTGATTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCt < 2:5386791/149‑1 (MQ=255) gAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTgg > 2:2410542/1‑150 (MQ=255) cTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCa > 1:1555670/1‑150 (MQ=255) cTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCa > 1:3112467/1‑150 (MQ=255) cTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCa > 2:4794118/1‑150 (MQ=255) cTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCa > 1:4759341/1‑150 (MQ=255) tGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAg < 1:5333985/150‑1 (MQ=255) tGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACGTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAg > 2:4613709/1‑150 (MQ=255) cgcCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGGTTAGTAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTcta < 1:5112307/150‑3 (MQ=255) cAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATcc > 2:4819619/1‑150 (MQ=255) cAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATcc > 1:5584553/1‑150 (MQ=255) cccAGTAAGCTGTCCGCCCCAGGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCctgctg < 2:5583588/150‑1 (MQ=255) ccAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTgg < 2:1671701/150‑1 (MQ=255) tAAGCTGTCCGCCCCATGCCCGGCCCGCATCACAGCCGGCCGGGCTTTACCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCGGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCGGGGGcc > 1:3490270/1‑149 (MQ=255) aaGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGcac < 1:2386752/150‑1 (MQ=255) aaGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGcac < 1:497807/150‑1 (MQ=255) tGTCCGCCCCATGCCCGGCCCGCATCAATGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTAGCAGGCCTGTCGATCCAGCTGGGGCACAAGc > 1:4229471/1‑150 (MQ=255) tCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTc < 1:473074/150‑1 (MQ=255) cGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCaa > 1:4442577/1‑150 (MQ=255) gCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAAc > 1:4719758/1‑150 (MQ=255) cccATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCAGTCGATCCTGCTGGGGCACATGCTCAACCa > 1:2608385/1‑150 (MQ=255) ccATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAg < 1:4018093/150‑1 (MQ=255) cATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAgg > 1:431201/1‑150 (MQ=255) cccggcccgCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGc > 1:845691/1‑150 (MQ=255) cccggcccgCAGTGATGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGc > 2:2106058/1‑150 (MQ=255) ccggcccgCAGTGATGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGcc > 1:4154512/1‑150 (MQ=255) ccggcccgCAGTGATGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGcc > 1:5460725/1‑150 (MQ=255) cgCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGCCTGGATc > 2:4955265/1‑150 (MQ=255) cgCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGCCTGGATc < 1:3433098/150‑1 (MQ=255) tCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACGTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGCCTGGATCCTCa < 2:3337798/150‑1 (MQ=255) | AAGTTGCTCACGGCTGACCAGCAGAAGAAGTTTGACGAACTGCAAAAAGAACGCGCCGCCAAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAAGGCGCCAAGGCCCAGTAAGCTGTCCGCCCCATGCCCGGCCCGCATCACTGCGGGCCGGGCTTTTCCCGTTTAGGAGGTGCACTTGCGTTCACTGTTCTGGCGCATCCTGGCCAGTTTCTGGCTGGCCATCACCCTGGTCGCAGGCCTGTCGATCCTGCTGGGGCACATGCTCAACCAGGACGCCTGGATCCTCA > NC_002947/5123043‑5123341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |