| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,197,756 | T→G | 7.4% | intergenic (+140/‑62) | PP_4572 → / → PP_4573 | hypothetical protein/AAA family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,197,756 | 0 | T | G | 7.4% | 508.5 / 7.2 | 189 | intergenic (+140/‑62) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (78/87); new base G (16/3); total (99/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.86e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
GTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCT > NC_002947/5197607‑5197903 | gTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCt < 2:4822774/150‑1 (MQ=255) tCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCtt < 1:3252080/150‑1 (MQ=255) tCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCtt < 2:5252300/150‑1 (MQ=255) gactgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCttatt < 1:4680767/150‑1 (MQ=255) tgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTTAA‑CCCGCCCCTACAACCTTATTAgg > 1:26799/1‑150 (MQ=255) tgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAgg > 2:2565402/1‑150 (MQ=255) tgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAgg > 1:4604611/1‑150 (MQ=255) gaCAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGgcgc < 2:3585452/150‑1 (MQ=255) cAGCGTGACGGTGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 2:943950/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGTCTGAAGACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGTAAACAAATCGAGATCATGTGCTTCCTGTTCGGGCCTCTTCGCGGTTAAA‑CCCTCCCCTACAACCTTATTATGCGCgg < 2:5297452/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTCGGCGCgg < 2:156041/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 1:2965480/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 2:3403392/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 2:1056742/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 1:3918141/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 1:3803975/150‑1 (MQ=255) gCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGt < 1:4257705/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTTAA‑CCCGCCCCGACAACCATATTAGGCGCGGGTTTa > 1:1533333/1‑150 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 1:1782194/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 2:4604611/150‑1 (MQ=255) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAc < 2:1796008/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTAccc < 1:802983/150‑1 (MQ=25) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTAccc < 2:474594/150‑1 (MQ=25) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAccc < 1:5497013/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAccc < 1:4195582/150‑1 (MQ=255) ggggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCGACAACCATATTATGCGCGGGTTTACCcg > 1:645206/1‑150 (MQ=255) cgggTATTCAGTCCCTGAATGCCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcg > 2:2468538/2‑150 (MQ=39) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcgc < 1:5086130/150‑1 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgc > 2:1166536/1‑150 (MQ=255) gCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgc < 2:5215329/150‑2 (MQ=255) ttCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCAACCACCGGAGTAGGCGCGGGGGTACCCGCGAagc > 1:5169797/1‑149 (MQ=255) tCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAagag > 1:3708982/1‑150 (MQ=255) ggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACACCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGccc < 2:3286538/150‑1 (MQ=255) tGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCaa > 2:1426351/1‑150 (MQ=255) aCCCGGTCTGCTTTTGCAGCCGCCTGGCCCCGCGTTATAGTCGGAAAAAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGccc < 1:3657542/150‑1 (MQ=255) cGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTaa > 2:2621257/1‑150 (MQ=255) cTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTGGGGCCTCTTGGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGGGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACag < 2:2536806/150‑1 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCTTTATCGTCGTAAACAAATCCTGATCTTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:1115752/150‑1 (MQ=38) cgCGTTCGCAGCCGCCAGCCCCCGCGGACCACCCGCCACCAACCCCAGAGCCTGTGCTGCCTGTACGGGCCTCTCCGCGGGTAAA‑CCCGCCCCTACACCCTTATAAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:4299497/149‑1 (MQ=19) cGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCGGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCCAAGCCCTAAACAGAgg > 1:5002372/1‑150 (MQ=255) aGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAAcc > 2:2752876/1‑150 (MQ=255) aGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCGAAACAGAGGACAAAcc > 2:2877296/1‑150 (MQ=255) cgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCAAAACAGAGGACAAAccccc > 2:743152/1‑150 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCAt < 2:3573023/150‑1 (MQ=255) cAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCCTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATg < 2:188888/150‑1 (MQ=255) ccccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCGGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCAAGCAGt > 1:360733/1‑150 (MQ=38) cccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCGACAACCGTATTAGGCGCGGGTTTAACCGCGAAGAGGCCCCCAAAGCCCAAAACACAGGGCAAAACCCCAAGAAGtt > 1:1049146/1‑150 (MQ=38) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACCAACCCCCATGAAGTTc > 2:3862033/1‑150 (MQ=255) cgTTATAGTCGTAAACAAATCCAGATCTTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 1:5544572/150‑1 (MQ=255) taaaCAAATCCAGACGTTGGGGGGCGTGTGGGGGCCTCTGGGGGGGAAAC‑CCCGCCCCCACCACCTTTTGCGGGGGGGTTTTCCCCGCGACGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGa < 1:1994809/149‑1 (MQ=255) aaaaaTCCTGATCTTGTGCTGCCTTTTGGGGCCTCTTCG‑GGGTAAACCCCCCCCCCACACCCTTATTCGGCGCGGTTTCACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTa < 1:2468538/148‑1 (MQ=255) aaaTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgcct < 1:1245813/87‑4 (MQ=37) aaaTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgcct > 2:1245813/1‑84 (MQ=37) aaaTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACg > 2:1371398/1‑150 (MQ=255) tCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGtaa > 1:5629763/1‑72 (MQ=255) tCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGtaa < 2:5629763/74‑3 (MQ=255) aGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca < 2:2211830/150‑1 (MQ=255) aGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca > 2:4374834/1‑150 (MQ=255) aTCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGCCAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCcaca > 2:896003/1‑150 (MQ=255) tCATGTGCGGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATGAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAg < 1:3432413/150‑1 (MQ=255) gtgCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑ACCCCCCCGGCAACCGTATTAAGCGCGGGGTTGACCGCGCAGAGGCCCCCAAAGCCCGAAAAACAGGACAAACCCCCAAGAAGTTAGAAGGCACCCCCCACGACCTCGCCCCAGATGa > 1:945524/1‑150 (MQ=255) gctgcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAcc < 2:3928063/150‑1 (MQ=255) gctgcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAcc < 2:2325141/150‑1 (MQ=255) gcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACACCCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGa < 1:4122778/150‑1 (MQ=255) gcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTAATAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCGAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGa > 2:4865254/1‑150 (MQ=255) ccTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCTACCACCATATTAGGCGCGGGGTTACCCCCGAAGAGGCCCGCAAAGCCCGAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACCGCGCCACCGATGACCAGaa > 2:5414589/1‑150 (MQ=38) cTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTATGCGCGGGTTTACCCGCGAAGAGGCCCGCAAACCCCTAAACAGGCGACAAACCCCCAAGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGaaa > 2:4775790/1‑150 (MQ=39) ttCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCCCAAAGCCCTAAACAGAGGACAAACCCCCAAGAAGTTCGAAGGCACCCGCGACAAAGTCGCCACAGATGACCTGCAACTg > 2:5214717/1‑150 (MQ=39) ttCGGGCCGCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTg < 2:1492894/150‑1 (MQ=255) cGGGCCTCTTCGCGGGAAAA‑CCCGCCCCTACACCCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGc < 1:1709905/150‑1 (MQ=255) ctctTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTaa > 1:2228942/1‑150 (MQ=25) tctTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGACCTACACAGAGGACAAACCCCCCTGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGTCCTGAAACTGGCGGTaaa > 2:2047770/1‑150 (MQ=255) ctTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAc < 2:5356612/150‑1 (MQ=255) cgcgGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgcg > 2:367375/1‑150 (MQ=255) cgcgGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgcg < 2:4619079/150‑1 (MQ=255) gtaaaa‑CCCCCCCAAACACCCTTATTCCCCGCGGTTTAACCCGCTAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCa < 1:498502/147‑1 (MQ=255) ggTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCa > 2:1815027/1‑150 (MQ=255) gTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAt > 1:5285969/1‑150 (MQ=255) aaa‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTa > 1:4185630/1‑150 (MQ=255) aaa‑CCCGCCCCCACACCCTTCTGTGGCGGGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAACCAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTa < 1:2438068/150‑1 (MQ=255) a‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGACATTAcc > 2:4934839/1‑150 (MQ=255) cccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc < 2:2420189/150‑1 (MQ=255) cccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc > 1:4345406/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 2:4526021/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 2:5534646/1‑150 (MQ=255) cGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTc < 2:1533333/150‑1 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa < 2:4395111/150‑1 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 2:5106783/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 2:5106811/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 2:4110786/1‑150 (MQ=255) aCAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTATGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGcc > 1:2551761/1‑150 (MQ=255) aCAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAATCTGGCGGTAAACGCGGCCATTACCCTCGAACGcc > 2:1656490/1‑150 (MQ=255) cAACCTTTTTCGGCGGGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGccc < 1:24261/150‑1 (MQ=255) cAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGccc < 1:3198697/150‑1 (MQ=255) cAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAATACCCTCGAACGccc > 2:3103442/1‑150 (MQ=255) aCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGc > 1:5621878/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:1203734/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:349133/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:5367560/1‑150 (MQ=255) ccTAATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:45779/1‑150 (MQ=255) | GTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCT > NC_002947/5197607‑5197903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |