| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,197,771 | T→A | 6.1% | intergenic (+155/‑47) | PP_4572 → / → PP_4573 | hypothetical protein/AAA family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,197,771 | 0 | T | A | 6.1% | 568.9 / 18.2 | 178 | intergenic (+155/‑47) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (94/71); new base A (8/3); total (104/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
GTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCG > NC_002947/5197623‑5197917 | tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTTAA‑CCCGCCCCGACAACCATATTAGGCGCGGGTTTa > 1:1533333/1‑150 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 2:4604611/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 1:1782194/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 1:1782638/150‑1 (MQ=255) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAc < 1:4009720/150‑1 (MQ=255) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAc < 2:1796008/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTAccc < 1:802983/150‑1 (MQ=25) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAccc < 1:5497013/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAccc < 2:4989702/150‑1 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgc > 2:1166536/1‑150 (MQ=255) gCATTCAGGGACTGTATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgc < 2:5215322/150‑2 (MQ=255) atggACTTAATACCCGGTCTGCGTTTCCACCCGCCAGGCCCCGCGTTATAGCCGCAAAAAAATCCATATAAGGTGCTGCCTGTTCGGGCCTATTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGTTTTACCCGCGAAGAGGc < 2:5185442/148‑1 (MQ=37) gggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGcc > 2:3198697/1‑150 (MQ=255) gggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGcc > 2:5543934/1‑150 (MQ=255) ggACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACACCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGccc < 2:3286538/150‑1 (MQ=255) gACTGCATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGGGTTTTAGTGGTAAAAAAATCAATTTCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGCAAC‑CCCGCCCCACCACCCTTTTTCGGCGGGGGTTTACCCGCGAAGAGGCCCg < 2:4249077/150‑1 (MQ=255) aCTGAATACCCGGTCTGCGTTGGCAGCCGCCCGGCCCCGCGTTATAGTCGGAAACAACTCCAGATCTTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACCACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGc < 2:1592184/150‑1 (MQ=39) aCCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTACA‑CCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGccc > 2:4309297/1‑150 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTTAA‑CCCGCCCCAACAAACATATTAGGCGCGGGTTTTCCCGCGAAGAGGGCCGCAAAccccga > 1:2440418/1‑148 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTa > 1:2211830/1‑150 (MQ=255) cGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTaa > 2:1995794/1‑150 (MQ=255) cGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTaa > 2:2621257/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCTTTATCGTCGTAAACAAATCCTGATCTTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:1115752/150‑1 (MQ=38) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:455210/150‑1 (MQ=255) gCGTGTGCAGCCGCCAGGCCCCGCGTGAGCGTCGGACACAAATCCAGATCATGTGCGGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag < 2:5244655/150‑1 (MQ=38) cGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCGGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCCAAGCCCTAAACAGAgg > 1:5002372/1‑150 (MQ=255) aGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTGATTAGGCGCGGGTGTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACCAAcc > 2:2806549/1‑150 (MQ=255) gccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAACCGCGAAGAGGCCAGCAAAGCCCTAAACAGAGGACAAAccc > 2:3540007/1‑150 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTGAA‑CCCCCCCCGACAACCAGATTATGCGCGGGTTTTCCCCCGAAGAGGCCCCCCAAGCCCGAAACAGAGGACCAAcccccc > 1:4244794/1‑149 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa > 2:1480181/1‑150 (MQ=255) cAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCCTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATg < 2:188888/150‑1 (MQ=255) ccccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCGGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCAAGCAGt > 1:360733/1‑150 (MQ=38) cccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCGACAACCGTATTAGGCGCGGGTTTAACCGCGAAGAGGCCCCCAAAGCCCAAAACACAGGGCAAAACCCCAAGAAGtt > 1:1049146/1‑150 (MQ=38) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACCAACCCCCATGAAGTTc > 2:3862033/1‑150 (MQ=255) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTc > 1:4619079/1‑150 (MQ=255) cgTTATAGTCGTAAACAAATCCAGATCTTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 1:5544572/150‑1 (MQ=255) cgTTATAGTCGGAAACAACTCCAGATCAGGTGCGGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACACCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 2:3084434/150‑1 (MQ=255) cgTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 1:5626777/150‑1 (MQ=255) cgTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGaa < 2:4523677/150‑1 (MQ=255) gTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGTGGACAAACCCCCATGAAGTTCGAAGGCAccc < 2:2564159/150‑1 (MQ=255) gAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGCAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGa > 2:1272877/1‑150 (MQ=255) aaaaaTCCTGATCTTGTGCTGCCTTTTGGGGCCTCTTCG‑GGGTAAACCCCCCCCCCACACCCTTATTCGGCGCGGTTTCACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTa < 1:2468538/148‑1 (MQ=255) aCAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTa < 1:3745282/150‑1 (MQ=255) aaaTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgcct > 2:1245813/1‑84 (MQ=37) aaaTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgcct < 1:1245813/87‑4 (MQ=37) aTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCAACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTc > 1:3664311/1‑150 (MQ=255) aGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca < 2:2211830/150‑1 (MQ=255) tCATGTGCGGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATGAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAg < 1:3432413/150‑1 (MQ=255) gctgcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAcc < 1:895600/150‑1 (MQ=255) gctgcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAcc < 2:2325141/150‑1 (MQ=255) ccTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCTACCACCATATTAGGCGCGGGGTTACCCCCGAAGAGGCCCGCAAAGCCCGAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACCGCGCCACCGATGACCAGaa > 2:5414589/1‑150 (MQ=38) cTGTTCGGGCCTCTTCTCGGTTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGaaa < 2:5265246/150‑1 (MQ=255) cTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTATGCGCGGGTTTACCCGCGAAGAGGCCCGCAAACCCCTAAACAGGCGACAAACCCCCAAGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGaaa > 2:4775790/1‑150 (MQ=39) cGGGCCTCTTCGCGGGAAAA‑CCCGCCCCTACACCCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGc < 1:1709905/150‑1 (MQ=255) ctctTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTaa > 1:2228942/1‑150 (MQ=25) tctTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGACCTACACAGAGGACAAACCCCCCTGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGTCCTGAAACTGGCGGTaaa > 2:2047770/1‑150 (MQ=255) ctTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAc < 2:5356612/150‑1 (MQ=255) ttCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcg > 1:4167053/1‑150 (MQ=255) ttCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcg > 2:813588/1‑150 (MQ=255) ttCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcg > 2:1405110/1‑150 (MQ=255) cgcgGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgcg < 2:4619079/150‑1 (MQ=255) cgcgGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgcg > 2:367375/1‑150 (MQ=255) ggTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCa > 2:1815027/1‑150 (MQ=255) gTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAt > 1:5285981/1‑150 (MQ=255) gTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAt > 1:5285839/1‑150 (MQ=255) aaa‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTa > 1:4185630/1‑150 (MQ=255) aaa‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTa > 2:4853425/1‑150 (MQ=255) a‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGACATTAcc > 2:4934839/1‑150 (MQ=255) cccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc < 2:2420189/150‑1 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCCTTACCCt > 2:935115/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:4395111/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:5093748/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:5554448/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:784903/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 2:5534646/1‑150 (MQ=255) cGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTc < 2:1533333/150‑1 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa > 2:4378136/1‑150 (MQ=255) cTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACg > 1:4989316/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 2:5106791/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACACGCGAACAGGACAGCAAAGCCCTAAACAGAGGACAAACCACCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCAATTACACTCGAACGc > 2:2495876/1‑150 (MQ=255) aCAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTATGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGcc > 1:2551761/1‑150 (MQ=255) aCAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAATCTGGCGGTAAACGCGGCCATTACCCTCGAACGcc > 2:1656490/1‑150 (MQ=255) cAACCTTTTTCGGCGGGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGccc < 1:24261/150‑1 (MQ=255) cAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGccc < 1:3198697/150‑1 (MQ=255) cAACCTTATTAGCCGCGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGccc < 2:26799/150‑1 (MQ=255) aCCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGc > 2:674004/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:349139/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:1203734/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:5367560/1‑150 (MQ=255) gttgtaGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGt > 2:3940767/5‑150 (MQ=255) tattaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGtt > 2:2037465/1‑150 (MQ=255) attcGGCGCGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTg < 1:2948557/150‑1 (MQ=255) attaGGCGCGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTg < 2:252234/150‑1 (MQ=255) attaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTg < 2:2431778/150‑1 (MQ=255) ttcgcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:3015903/3‑150 (MQ=255) tcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTATACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCaa > 1:2745694/2‑150 (MQ=255) tcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCaa > 1:3584640/2‑150 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAgg > 1:2903960/1‑150 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAgg > 2:5468102/1‑150 (MQ=255) gggTTTACCCGCGAAGAGGCCCGCATAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGc < 2:4141794/150‑1 (MQ=255) | GTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCG > NC_002947/5197623‑5197917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |