| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 406,252 | A→C | 5.9% | intergenic (‑193/+115) | PP_0337 ← / ← aceF | sensory box protein/AceF‑S‑acetyldihydrolipoate |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 406,252 | 0 | A | C | 5.9% | 910.4 / 25.3 | 271 | intergenic (‑193/+115) | PP_0337/aceF | sensory box protein/AceF‑S‑acetyldihydrolipoate |
| Reads supporting (aligned to +/- strand): ref base A (122/131); new base C (6/12); total (128/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 271 total aligned reads displayed.
TTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATCGCCCAGCAC > NC_002947/406106‑406399 | tttGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGcc > 1:1221829/1‑150 (MQ=255)tttGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGcc > 1:1435324/1‑150 (MQ=255) ttGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGccc < 1:4076213/150‑1 (MQ=255) cAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTccc < 1:2719600/150‑1 (MQ=255) aaGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCa < 1:1302668/150‑1 (MQ=255) ggTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCTTCGCCCTcctttc < 2:4278181/150‑5 (MQ=255) ggTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGc < 1:4404258/150‑1 (MQ=255) tGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCttt < 1:5004784/150‑1 (MQ=255) gCATGAGGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCtttt < 1:4327547/150‑1 (MQ=255) cATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGTCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCttttt < 2:2414360/150‑1 (MQ=255) atgatgTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTc > 2:5460716/1‑150 (MQ=255) tgatgTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTcc < 1:4245274/150‑1 (MQ=255) atgTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTGTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAg > 2:564219/1‑150 (MQ=255) tgTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAgg < 2:3009568/150‑1 (MQ=255) tgTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAgg < 2:3009668/150‑1 (MQ=255) tCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑a > 2:4760120/1‑150 (MQ=255) cGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaa < 2:4774471/150‑1 (MQ=255) cGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaa < 1:3103814/150‑1 (MQ=255) cGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaa > 2:728558/1‑150 (MQ=255) ggCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaaaaaa < 2:793542/150‑1 (MQ=255) ggCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaaaaaa < 2:5172620/150‑1 (MQ=255) ggCTGGCAAGCGGCCATGATTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaaaaaa < 1:3536487/150‑1 (MQ=255) gCTGGCAAGCGGCCATGCTTGATGCTGTGGACGGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAg > 1:2459401/1‑150 (MQ=255) tGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGcc > 1:1726634/1‑150 (MQ=255) tGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGcc > 2:1934767/1‑150 (MQ=255) ggCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGccc < 2:1069496/150‑1 (MQ=255) ggCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGccc > 1:962129/1‑150 (MQ=255) gCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGcccc > 1:4908465/1‑150 (MQ=255) cAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCg < 2:2285033/150‑1 (MQ=255) aaGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGCAAAAAAAAAGCCCCg > 1:480019/1‑150 (MQ=255) aaGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGc > 2:1979771/1‑150 (MQ=255) cGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCaa < 2:3412808/150‑1 (MQ=255) ggCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAAt < 2:2527769/150‑1 (MQ=255) aTGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGAc > 1:852077/1‑150 (MQ=255) aTGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGAc > 1:3148822/1‑150 (MQ=255) aTGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGAc > 1:2095779/1‑150 (MQ=255) gCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACgg < 1:5561712/150‑1 (MQ=255) cTTGATGCTGTGGACTGGTTATCGGCTGACGTGGCCGATTATGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACggg < 1:5218315/150‑1 (MQ=255) ttGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCCCCCATCGGCgggg > 2:5323439/1‑150 (MQ=255) gATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGtt > 1:1037923/1‑150 (MQ=255) gATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGtt > 1:3766947/1‑150 (MQ=255) tGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGTCGATTGGCggggcttt < 2:371561/150‑5 (MQ=255) gCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAg < 1:2202675/150‑1 (MQ=255) cTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCTTCGCCCTc < 2:160915/101‑1 (MQ=255) cTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGTCGATTGGCggggcttttt < 1:728558/150‑7 (MQ=255) cTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAgg < 2:1187929/150‑1 (MQ=255) tgGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGGTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AATATTAAGCCCCGCCAATCGACGGGGTTGAGGTAc > 1:1405430/1‑150 (MQ=255) gACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCGGGAGATGGTGGGGCCGCTTTGCGGCCGTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑CAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGa > 1:2988039/1‑150 (MQ=255) cAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGc > 2:5217908/1‑150 (MQ=255) gtttATCGGCTTACGTGGCCGTTTCTGCTGTTTGGCTGGATATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCTAATGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGt < 1:1565488/148‑1 (MQ=255) tATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGCCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTgcc < 1:1027293/150‑3 (MQ=255) ggCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCt > 1:3958440/1‑150 (MQ=255) gCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTc > 1:670878/1‑150 (MQ=255) aCGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGaaa > 1:2604495/1‑150 (MQ=255) gTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGaaaca < 2:40682/150‑3 (MQ=255) gTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGaaaaa < 2:333914/150‑1 (MQ=255) gTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGaaaaa < 1:3617919/150‑1 (MQ=255) gTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGaaaaa < 1:1979619/150‑1 (MQ=255) gTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGaaaaa < 2:5309697/150‑1 (MQ=255) tGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAg > 2:1053307/1‑150 (MQ=255) tGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAg < 2:2039987/150‑1 (MQ=255) tGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAg < 1:1783271/150‑1 (MQ=255) gggCCGTTTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTGTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAg < 1:515887/149‑1 (MQ=255) ggCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAgg > 1:219295/1‑150 (MQ=255) gCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGt > 1:153438/1‑150 (MQ=255) gCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGt > 1:2883340/1‑150 (MQ=255) ccGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTa < 2:4978967/150‑1 (MQ=255) cGATTCTGCAGTTTGGCTTGAGATTTTGGGGCCGCTTTGCGGCCGTCTGTCGCCAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGATGAGGTACGAGCGTGGCAGCTCGAAAAAGGTAc > 2:3139319/1‑150 (MQ=255) cGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTAc > 1:3081340/1‑150 (MQ=255) ttCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGc > 1:3715024/1‑150 (MQ=255) ttCTGCAGTTGGGCGGGTGTTTTTGGGGCCGCTTTGCGGCCTTTTGTCGCGTAAGGAGGGCGCCGCCCTCCGATCTTTTTCCAGGC‑AACAAACAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAACGGTACGGc < 2:4876336/150‑1 (MQ=255) gCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCt > 2:3787370/1‑150 (MQ=255) gTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGc > 1:2954918/1‑150 (MQ=255) tttGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCa > 1:2151108/1‑150 (MQ=255) cTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAaggag < 1:5509523/150‑1 (MQ=255) tGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAaggagg < 2:654217/150‑1 (MQ=255) tGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAaggagg > 2:2316305/1‑150 (MQ=255) tGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAaggagg > 2:1029560/1‑150 (MQ=255) ggAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAggg < 2:219295/150‑1 (MQ=255) gagaTTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAgggg < 1:4512550/150‑1 (MQ=255) gaTTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCa < 1:4703329/150‑1 (MQ=255) ttttGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAgt > 2:1542266/1‑150 (MQ=255) ttttGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAgt < 2:1446945/150‑1 (MQ=255) tttGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaaaa < 2:5439075/71‑1 (MQ=255) tttGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑aaaaaa > 1:5439077/1‑71 (MQ=255) ggCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTg < 1:3928779/150‑1 (MQ=255) gCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTgg < 2:3766947/150‑1 (MQ=255) gCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTgg > 2:5603094/1‑150 (MQ=255) ttGCGGCCTTGTGTCGCGACAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTAca < 1:5482655/150‑1 (MQ=255) ttGCGGCCTTGTGTCGCGAAAGGAGGGCGACGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTAca < 1:1988899/150‑1 (MQ=255) gCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACagcagc > 2:4461436/1‑150 (MQ=255) tCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCg > 2:1477030/1‑150 (MQ=255) gcgAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGa < 2:2459401/150‑1 (MQ=255) ctgggaggGCTTCGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGatat > 1:417571/4‑150 (MQ=255) tgggaggGCTTCGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATc > 2:2769004/3‑150 (MQ=255) aaGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTGGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATc > 2:4515237/1‑150 (MQ=255) gaggGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATCGcc < 1:3304221/150‑1 (MQ=255) ggCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGGTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATCGCCCAg > 1:3171703/1‑150 (MQ=255) cGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATCGCCCAGCa > 1:3896240/1‑150 (MQ=255) gAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATCGCCCAGCAc > 2:354544/1‑150 (MQ=255) | TTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCTGACGTGGCCGATTCTGCAGTTTGGCTGGAGATTTTGGGGCCGCTTTGCGGCCTTGTGTCGCGAAAGGAGGGCGAAGCCCTCCCAGCTTTTTCCAGGC‑AAAAAAAAGCCCCGCCAATCGACGGGGTTGAGGTACGAGCGTGGCAGCTCGAAAAAGGTACTGCCCCTCGCAAGGAGGGGCAGTGTGCTGGCTTACAGCAGCATGGTGCGGATATCGCCCAGCAC > NC_002947/406106‑406399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |