| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 81,031 | T→G | 6.2% | intergenic (+88/‑46) | tsaC → / → PP_5425 | threonylcarbamoyl‑AMP synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 81,031 | 0 | T | G | 6.2% | 796.1 / 28.7 | 245 | intergenic (+88/‑46) | tsaC/PP_5425 | threonylcarbamoyl‑AMP synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (129/100); new base G (10/6); total (139/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.25e-01 | |||||||||||
Only 100 of 252 total aligned reads displayed.
CGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCT > NC_002947/80884‑81180 | gaagaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGc > 2:2928889/1‑150 (MQ=255) aagaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGcc < 1:1530975/150‑1 (MQ=255) agaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAAATCGGTGCCAGGCACGGGCTTCGccc < 2:105072/150‑1 (MQ=255) aaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt < 1:1071815/150‑1 (MQ=255) aaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt < 2:5431012/150‑1 (MQ=255) cccGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgtgt > 1:1742398/1‑150 (MQ=255) cccGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgc < 2:1940135/150‑2 (MQ=255) cccGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGGTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgc < 2:3907288/150‑2 (MQ=255) cGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgcct < 1:3402001/150‑4 (MQ=255) gAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcg > 1:1459514/1‑150 (MQ=255) gAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcg > 1:1379246/1‑150 (MQ=255) gAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcg > 1:5051597/1‑150 (MQ=255) gtgtGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcgcg < 1:3749512/150‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCGTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg < 2:3419724/150‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg < 2:927776/150‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg < 2:1111349/150‑1 (MQ=255) gtgATTCGCGACCTGGCAACCGGCGTAGTCGTTCGCCCGGGTTTATACCAATCCACAGGCCTGGCTCGGGACGCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAATAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCggg < 1:4858704/150‑1 (MQ=255) gtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCggg < 1:5204506/150‑1 (MQ=255) tCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGc > 1:412634/1‑150 (MQ=255) tCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGACGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGc < 2:5459015/150‑1 (MQ=255) cgcgACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGcc < 1:4547865/150‑1 (MQ=255) tGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTccc > 1:4325150/1‑150 (MQ=255) gCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGa > 1:4676426/1‑150 (MQ=255) gCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAAGCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGcgaacac < 2:1681224/150‑7 (MQ=255) aaCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGaaa < 1:126558/150‑1 (MQ=255) aaCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGaaa < 1:2282333/150‑1 (MQ=255) ccGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAgt < 2:2262528/150‑1 (MQ=255) cGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAgtg < 2:1258213/150‑1 (MQ=255) gAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCAc > 2:2070840/1‑150 (MQ=255) cGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGcaca < 2:2324620/150‑1 (MQ=255) gTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCAAGCACAt > 2:702049/1‑150 (MQ=255) tCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGa < 2:3960594/150‑1 (MQ=255) cccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTg < 1:1875354/150‑1 (MQ=255) ccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGc > 1:304177/1‑150 (MQ=255) ccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGc > 2:1978200/1‑150 (MQ=255) ccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACAGGACTGc > 1:2357449/1‑150 (MQ=255) cGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGcc > 1:3789141/1‑150 (MQ=255) gTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCtt > 2:5417428/1‑150 (MQ=255) tGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCGTCg > 1:1597323/1‑150 (MQ=255) gATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGGTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgc > 2:2354048/1‑150 (MQ=255) agaCCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCGTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgca < 2:4235998/148‑1 (MQ=255) cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCCGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGCAAGTGTCACGCACCGGACTGCCCTTCGCAGCAc > 2:3329428/1‑150 (MQ=255) cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCAc > 1:5366043/1‑150 (MQ=255) aaTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGCACGTGTCACGCACATGACTGCCCTTCGCAGCACg > 1:3321152/1‑150 (MQ=255) aTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGt > 2:3999458/1‑150 (MQ=255) tCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGtt < 2:3613749/150‑1 (MQ=255) ctgcgaagggcagtcatgtgcgtgacactttcGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTc < 1:966137‑M1/77‑1 (MQ=255) ccACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGttt < 2:529141/150‑1 (MQ=255) acaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGCCTGCCCTTCGCCGCACGTTTgg > 1:3897863/1‑150 (MQ=255) acaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCGTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTgg > 2:5130140/1‑150 (MQ=255) caGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGt < 2:3234330/150‑1 (MQ=255) aGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTc > 2:3817074/1‑150 (MQ=255) aGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTc > 2:4063860/1‑150 (MQ=255) cTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCga < 1:3159428/150‑1 (MQ=255) tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGatgatg > 2:5157581/1‑150 (MQ=255) tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGGTTGGTCGCGatgatg > 1:5299941/1‑150 (MQ=255) cGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGACAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATgg > 2:763521/1‑150 (MQ=255) gaatagggCCACTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACACGGTGCCAGGCACGGGCTTAGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACAGCCCTTCGCAGCACCTTTGGTCGCGATGATGGCTa > 2:207970/6‑150 (MQ=37) gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTa < 1:244720/150‑1 (MQ=255) gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTa < 1:3870761/150‑1 (MQ=255) gggCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTa > 1:635148/1‑150 (MQ=255) ggCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGtca > 2:3157479/1‑148 (MQ=255) ccccTGTGGGAGCGGGCGCGCCCGCGAAGAATCCAACTCGGTGCCCGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACg < 2:3731785/150‑1 (MQ=255) ccTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACCTGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAg > 2:479412/1‑150 (MQ=255) ccTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAg > 2:352499/1‑150 (MQ=255) tgGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTACCGAGGTCt > 2:4895418/1‑150 (MQ=255) GGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTc < 1:5419435‑M1/150‑1 (MQ=255) GAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCg < 1:1795234‑M1/150‑1 (MQ=255) AGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGa > 1:5058541‑M1/1‑150 (MQ=255) AGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGa > 2:4691501‑M1/1‑150 (MQ=255) GCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGAt > 2:154197‑M1/1‑150 (MQ=255) GCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGAt > 2:850779‑M1/1‑150 (MQ=255) GCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGAt > 1:846972‑M1/1‑150 (MQ=255) GCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAgg > 1:4281015‑M1/1‑150 (MQ=255) ccGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttt > 2:3748468/1‑150 (MQ=255) ccGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttt > 2:1587379/1‑150 (MQ=255) gcgAAGAATCCAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttttt < 2:2477466/150‑1 (MQ=255) cgAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTg > 1:2568026/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 1:2131865/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 1:720283/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 1:237807/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 2:4228222/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa < 2:557604/150‑1 (MQ=255) aTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGa < 2:4678364/150‑1 (MQ=255) tACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGAc > 1:4938681/1‑150 (MQ=255) tACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGAc > 2:2658852/1‑150 (MQ=255) aaCTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGc > 2:1362273/1‑150 (MQ=255) aaCTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGc > 1:3750321/1‑150 (MQ=255) tCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCg > 1:1963569/1‑150 (MQ=255) ccgcgaacACGGGCGAAGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAg > 2:4659609/8‑150 (MQ=255) ccgcgaacACGGGCGAAGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAg > 1:2870113/8‑150 (MQ=255) ccAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCTATTTTTGAACTGACGGCCCGCAAGcc > 1:2783313/1‑150 (MQ=255) aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttttt < 1:856605/128‑1 (MQ=255) aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCa > 2:4581046/1‑150 (MQ=255) aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCa > 1:4457358/1‑150 (MQ=255) ggCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCaa < 2:1742398/150‑1 (MQ=255) acACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAg > 1:4529079/2‑150 (MQ=255) cgcGGGCTTCGCGCGTGTTCGCGGGCTTGCCCGCTCCCGAAAGTGTCACGCTCATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAgg < 2:3384931/148‑1 (MQ=255) cACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAgg < 2:412634/150‑1 (MQ=255) gCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCagag > 1:4369338/1‑150 (MQ=255) | CGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCT > NC_002947/80884‑81180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |