| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 414,071 | T→A | 5.1% | intergenic (+88/‑115) | glnE → / → waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 414,071 | 0 | T | A | 5.1% | 424.7 / 8.9 | 137 | intergenic (+88/‑115) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
| Reads supporting (aligned to +/- strand): ref base T (72/56); new base A (5/2); total (78/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
ACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGT > NC_002947/413923‑414217 | acaGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGGGGGCGCGGGCTTg > 2:3164447/1‑150 (MQ=255) tttGCCGATGAACGCCGTGAAGTGCGGTGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCcg > 1:3670803/1‑150 (MQ=255) cGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAAt > 2:3889505/1‑150 (MQ=255) gATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATa < 2:2427164/150‑1 (MQ=255) gATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCGCCCACAGGTCATGCACC‑GGCCCGGTGCCGGGTGCAATCCCGGGGGGAGCGGGCTTGCGCGGGACTa > 1:3324007/1‑150 (MQ=255) aTGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCGGAGCAGTGTGCAATCCCGGTGGGAGCGGGCTTGCCCGCGAagag > 1:4057989/1‑150 (MQ=255) ccGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCAtgt > 2:681229/1‑150 (MQ=255) gTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCTGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGt < 2:2115174/150‑1 (MQ=255) tGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTa < 2:809673/150‑1 (MQ=255) gcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACt < 2:2955969/150‑1 (MQ=255) cgATCTGGGGTCACTTGGGTTTAACCTGATACCGTGATGCCATATTCGCCGCCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAAACCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGt < 2:4540036/149‑1 (MQ=38) gATCTGGGGTGCGTGGGGTCTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACC‑GGCCCTTAGCAGTGTGCAATCCCGGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTc < 1:874486/150‑1 (MQ=38) tCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACGGCACA‑GGCCCTGAGCAGTGTGCAATCCCGGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCg < 1:4600695/150‑1 (MQ=255) cgggggTGTGTTGGGTTTCAGCTGATACCGTGTTGGCTTATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGc < 1:3164240/148‑1 (MQ=255) gggTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCcac < 1:3578103/150‑1 (MQ=255) ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACC‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCt < 1:3160264/150‑1 (MQ=255) ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCt < 2:2891609/150‑1 (MQ=255) ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCGCCCACAGGTACTGCCCA‑GGCCCTGAGCAGTGTGCAATCCCGGTGGGCGCGGGCTTGCCCGCGACTAGGCCATGTGAGTGGTACACTGTCCGCCACATAGccg > 1:5010699/1‑149 (MQ=39) tGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTg < 2:3260258/150‑1 (MQ=255) gggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGa < 2:4715111/150‑1 (MQ=255) ggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGaa < 2:4132056/150‑1 (MQ=255) ggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACAGCACA‑GGCCCGGGGCAGTGTGCAATCCCGGTGGGAGCGGGCTGGCCCGCGAATAGGCCCTGTGAGTGGTACACAGTCCGCCACAAAGCCTgca > 1:519231/1‑148 (MQ=37) tGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAagag > 2:5158199/1‑150 (MQ=255) ttgccggtgtTGGCTTTTGCGCGGGCACGCCCGCGCCCCCCGGTACGGCACC‑GGCCGGGCGCTGGGTGCACGCCCTGGGGGCGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAgg < 1:2530783/144‑1 (MQ=255) gATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAgg > 2:3492112/1‑150 (MQ=255) tACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCCGTGTGCAATCCCGGTGGGCGCGGGCGTGCCCGCGAATAGGCCCTGTGAGTGGGACACTGTCCGCCACATTGCCTGAATAGAAAGAgggg > 1:3851122/1‑150 (MQ=37) gtgtTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCGCGCGAATAGGCCATGTGAGTGGTACACTGTGCGCCACATTGGCTGAATATAAAGAGGGGAggg > 2:1932104/1‑149 (MQ=255) tgtTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGcc > 2:5618290/1‑150 (MQ=255) tGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAgg < 2:1581747/150‑1 (MQ=255) tgggagcgGGCTTGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCca > 2:4738231/6‑114 (MQ=255) tgggagcgGGCTTGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCca < 1:4738231/109‑1 (MQ=255) cgcgGGCACGCCCGCTCCCACAGGTACCGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGc < 2:1629828/150‑1 (MQ=255) gcgGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTTAGCTGTGTGAAATCCGTGTGGGAGGGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCa < 1:3463459/150‑1 (MQ=39) gggCACGCCCGCTCCCACTGGTCCTGCACA‑GGCCCTGAGCTGTGTGCACTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGc < 1:3015960/150‑1 (MQ=39) gggCAAGCCCGCTCCCACCGGTACTGCACC‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGc < 1:1076828/150‑1 (MQ=255) gggCAAGCCCGCTCCCACAGGTACGGCACC‑GGCCCTCAGCAGTGTGCAATCCGTGTGGGAGGGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGc < 1:2370336/150‑1 (MQ=255) gggCAAGCCCGCTCCCACAGGTACGGCACA‑GGCCCTGAGATGTGTGCATTGCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGc < 2:2901257/150‑1 (MQ=39) gCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCt < 1:4425427/150‑1 (MQ=255) cAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCGGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTg > 2:1481516/1‑150 (MQ=255) aGCCCGGTCCCACTGGTACTGCACA‑GGCCCTGCGCAGTGTGCAATCCCTGTGGGTGGGGGCTGGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTa < 1:816851/150‑1 (MQ=255) gCCCGCTCCCACAGGGATTGCACACTGCTCAGGGC‑CTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAg > 1:1590370/1‑150 (MQ=18) cGCTCCCACAGGGATTGCACACTGCTCAGGGC‑CTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCt > 1:3630136/1‑150 (MQ=18) gCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGAAATCCCTGTGGGAGCGTGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTc < 2:1381745/150‑1 (MQ=255) ccacccACAGTAACTGCACA‑GGCCCTGAGCAGTGTCCAATCCCTGTGGGAGCGGGCTTCCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTc < 1:2355011/147‑1 (MQ=255) ccccACTGGTCCTGCACC‑GGCCCTGCGCAGTGTGCAACCCCTGTGGGCGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTccc < 1:1561771/149‑1 (MQ=255) cccACAGGTCCTGCCCC‑GCCCGTGAGCTGTTCGCAACCCCTGTGGGCGCGGGCGTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTcccc < 1:262130/150‑1 (MQ=255) ccACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg > 1:566145/1‑150 (MQ=255) ccACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg > 1:565748/1‑150 (MQ=255) ccACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg > 2:5119600/1‑150 (MQ=255) ccACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg > 2:5119380/1‑150 (MQ=255) cacaGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAgg < 2:3796278/113‑1 (MQ=255) cacaGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa > 2:473875/1‑150 (MQ=255) cacaGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa > 1:3853161/1‑150 (MQ=255) acaGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAg > 2:1783865/1‑150 (MQ=255) acaGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAg > 2:1783910/1‑150 (MQ=255) aCTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTc > 1:2854881/1‑150 (MQ=255) tGCACC‑GGCCCTGAGCAGTGTGCAAGCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg < 2:609825/150‑1 (MQ=255) tGCACA‑GGCCCTGAGCAGTGTGCAATCCGGGTGGGCGGGGGCTTGCCCGCTAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg < 1:3481838/150‑1 (MQ=255) gCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTgg > 2:3329712/1‑150 (MQ=255) caca‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa > 2:1099552/1‑150 (MQ=255) caca‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa > 1:4796617/1‑150 (MQ=255) caca‑GGCCCTGAGCAGTGTGCAATCCCTGGGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa < 2:1655137/150‑1 (MQ=255) aca‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc > 2:3958680/1‑150 (MQ=255) ggCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTaa < 2:3699010/150‑1 (MQ=255) ccTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCa > 1:3018001/1‑150 (MQ=255) cTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCAt < 2:5567062/150‑1 (MQ=255) aGCAGTGTGCAATCCCTTAGGGAGCGGGCTTGCACGCGAATAGGCCATGTGAGTGGTACACAGTCCGCCACATATCCTCAATATAAAGAGGGGAGGACACGATGTAACGCAGCCTGTATCCTCCCCGAGCGTATCTGGACTAAGCATgag > 2:2940915/1‑150 (MQ=255) aGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATgag > 2:2940850/1‑150 (MQ=255) aGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATgag > 1:4398884/1‑150 (MQ=255) gCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATgaga < 2:4922959/150‑1 (MQ=255) cAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGGCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCTGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGaa > 2:4829115/1‑150 (MQ=255) gtgtGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATa > 2:1177879/1‑150 (MQ=255) gtgtGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACAGAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATa < 2:4562102/150‑1 (MQ=255) gtgtGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCAGCCACATAGCCTGAATATAAATAGCGGAGGCCAGGCTGTACCGCAGCCTGAAGCCTCACCGAGCGATACTGGACTAAGCAAGAGAATa > 1:1233087/1‑150 (MQ=255) tgtgCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATAc < 1:2222376/150‑1 (MQ=255) tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCt > 2:3695701/1‑131 (MQ=255) tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCt < 1:3695701/131‑1 (MQ=255) tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATAc > 2:2634004/1‑150 (MQ=255) tgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTg > 1:5137956/1‑150 (MQ=255) cAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCGTGAATATAATGTGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGAt > 2:3901471/1‑150 (MQ=255) aTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCa > 2:4554544/1‑150 (MQ=255) cccTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCAtt > 1:5460459/1‑150 (MQ=255) ccTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTg < 2:4220639/150‑1 (MQ=255) cTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATTAGAATACTGATCATTgg > 1:154981/1‑150 (MQ=255) cTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTgg > 1:570027/1‑150 (MQ=255) ctattcgCGGGCAAGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGcc > 1:746235/7‑150 (MQ=255) tgGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGccc > 2:2950630/1‑150 (MQ=255) tgGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCGGAGTATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCGGGACTAAGCATGAGAATACTGATCATTGGccc > 1:1199805/1‑150 (MQ=255) tattcgCGGGCAAGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATgag > 2:3953277/6‑132 (MQ=255) tattcgCGGGCAAGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATgag < 1:3953277/127‑1 (MQ=255) tattcgCGGGCAAGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGccc > 1:5069138/6‑150 (MQ=255) gggAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGcccc > 2:3085003/1‑150 (MQ=255) attcgCGGGCAAGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGcccc > 1:3740866/5‑150 (MQ=255) gAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAg > 1:3225445/1‑150 (MQ=255) aGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCGGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGc > 2:3605148/1‑150 (MQ=255) gCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCt < 2:4432806/150‑1 (MQ=255) cGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTg > 1:3845964/1‑150 (MQ=255) gggCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTgg < 2:1356131/150‑1 (MQ=255) gCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGt > 2:3275482/1‑150 (MQ=255) gCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGt > 1:3908062/1‑150 (MQ=255) | ACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACA‑GGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGT > NC_002947/413923‑414217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |