| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,293,444 | T→A | 8.4% | intergenic (‑128/+56) | PP_4660 ← / ← mdaB | LysR family transcriptional regulator/drug activity modulator B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,293,444 | 0 | T | A | 8.4% | 470.4 / 4.4 | 177 | intergenic (‑128/+56) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B |
| Reads supporting (aligned to +/- strand): ref base T (74/68); new base A (14/5); total (101/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.95e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 184 total aligned reads displayed.
GTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGG > NC_002947/5293295‑5293593 | gTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCt < 1:1295748/150‑1 (MQ=255) tcttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGc < 2:3496579/150‑1 (MQ=255) tcttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGc > 2:2746562/1‑150 (MQ=255) gatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGc > 2:2255238‑M1/95‑150 (MQ=255) cGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTaa < 2:2612830/150‑1 (MQ=255) ggATCGGGTTTTCACGTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAAt < 2:2585501/150‑1 (MQ=255) agcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAAt > 1:1725581‑M1/90‑150 (MQ=255) gATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACAGCAAACTCCTTGAAAACGGCGGAATa > 2:1310459/1‑150 (MQ=39) aTCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAc < 1:1338728/150‑1 (MQ=255) tCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCCCGCCCACAAGGACGGCAAAGTCCGGGAAACCAGCCGAATAcc > 1:5116616/1‑150 (MQ=255) cGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGAGTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCCCGCCCACAAGGACTGCAAAGTCCGGGAAACCAGCGGAATAccg > 1:1367781/1‑149 (MQ=255) ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 1:2774786‑M2/1‑147 (MQ=255) ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCCCGCCCCCAAGTACAGCAAACTCCATGAAACCAGCCTAATaacagg > 1:4452026/1‑145 (MQ=255) cggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 1:3450277‑M1/84‑150 (MQ=255) ggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 1:2995633‑M1/83‑150 (MQ=255) gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 1:434407‑M2/1‑146 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 1:1632437‑M2/1‑145 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 1:3178946‑M2/1‑145 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 1:5237473‑M2/1‑145 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 1:3060302‑M2/1‑145 (MQ=255) ttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtggga > 1:1030370‑M2/1‑143 (MQ=255) ttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtggga > 1:5085388‑M2/1‑143 (MQ=255) ttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtggga > 1:1030144‑M2/1‑143 (MQ=255) cacaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagc > 2:2955983‑M2/1‑141 (MQ=255) acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCGTGAAACCAGCGTAATACCggtgggggcg < 2:283738‑M2/150‑11 (MQ=255) acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTACAGCAAAGTCCATGAAAACATCGTAATAACagtgggggcg < 1:1341421‑M2/150‑11 (MQ=255) ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg > 2:4035859‑M1/76‑150 (MQ=255) caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgg > 2:212077‑M2/1‑139 (MQ=255) caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgg > 1:2242382‑M2/1‑139 (MQ=255) cggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCggg > 1:1203874‑M1/75‑150 (MQ=255) aTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACCAGTACTGCAAAGTCCGTGAAACCTGCGGAATACCtgtgggagcggg < 2:5121147‑M2/150‑13 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggc > 2:4014000‑M2/1‑137 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggc > 1:5510285‑M2/1‑137 (MQ=255) ccTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagccc > 1:847713‑M2/1‑131 (MQ=255) gtgGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCACCCACAACTACTGCCAAGTCCGTGAAACCAGCGGAATAACggtgggagcgggccatcccgcg < 2:1526865‑M2/150‑23 (MQ=255) gtgGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTTCCCCCGCCCCAAAGGACTGCAAAGACCGTGAAAACAGCCGAATAACAGGGGGTGCGGGCAAccccccc > 1:1238206/1‑147 (MQ=255) tggttggtCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAc < 1:4010389/126‑1 (MQ=255) cgcttccgaggcccatctggacacggtgtttggcaaggcacagtaattttatgactgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACACGTACTGCACAGTCCTTGAACCCTGCGTAAGACCTGTGGGAGCGGGCAAGCCCGCGAag > 2:3954946‑M1/62‑150 (MQ=255) ttgttCTGTGCATGTATTACTTAAGCTCTTTTGGCGGCCAAGTCCTGCGGCGCCTGTTTGGGCATCTTGGGGGGTTTGCCCGCTCCCACAAGTACTGAAATGTCCTTTAAACCTGCTTAATACCTGTGGTTGCGGGAAAGCCCGCGAaga < 2:220734/150‑1 (MQ=255) tggtCTGTGCATGGATTAGATACCCGCTGGTCGCGCCCAAGTCCAGCGGCGCCTTTATGGGCCTCTTCGCGGGCTTGCCCGCCCCCACAAGTACGGCAAAGGCCTTGAACCCTGCGTAACACCTGTGGGAGCGGGAAAGCCCGCGAagag < 2:1017835/150‑1 (MQ=37) gtCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggc > 2:4153164‑M2/1‑121 (MQ=255) cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCCCAAGTACAGCAAAGTCCTTGAAACCTGCGGAATACCggtgggagcgggcaagcccgcgacgaggcccgtaca < 2:3929367‑M2/150‑37 (MQ=255) ggATTAGATACCGGGTTGTCGTGGCCAAGTCCAGCGGCGCCTTTATGGGCCTCTTCGGGGGGTGGCCCGCTCCCACACGTACTCAAACGTCCTTGAAACCGGCGTAAAACCTGTGGGCGCGGGAAAGCCCGCGAAGAGGCCGGTACAGAc < 2:4408400/150‑1 (MQ=255) tAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATaa > 2:3657792/1‑150 (MQ=255) tAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCGTGAAAACTGCGGAATACCGGTGGGAGCGGGCCATCCCGCGAAGAGGCCGGTACAGACATaa > 2:4331123/1‑150 (MQ=38) aGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCGCCCACAATTACAGCAAAGTCCTTGAAACCTGCGTAATAACTGTGGGAGCGGGCAAGCCCCCGAAGATGCCGGTAAAGACAaaaa > 2:5428267/1‑150 (MQ=38) gATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACCAGTACTGCAAAGTCCTTGACACCGGCGTAATACCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACCGACATtaaa > 2:5622837/1‑150 (MQ=38) tAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCATGCCCCCTCCCACAAATACTGCCAAGTCCGTGAAACCGGCGGAAAACCAGTGGGGGCGGGCAAGCCCCCGAAGAGGCCGGTAAACACAGaaaaat > 1:4659448/1‑148 (MQ=255) acccGCTTGTCGCGGCAACGCCCAGCGGCGCCTGTAGGGGCCTCTCCGCGGGCTTGCCCGCTCCCACAAGTACTCCAAAGTCCTTCAAACCTGCTTAACACGTGTGGGTGCGGGCACGCCCGCGAAGAGGCCGGTACAGACATAAAATTa < 2:3848874/148‑1 (MQ=255) aaCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCCCAGCCACCAGTAATGCAAAGTCCTGTGAACCGGCGTGATACCGGTGGGCGCGGGCCACCCCGCGCAGAGGCCGGTACCGACATAAAAATa > 2:2507545/1‑150 (MQ=255) aCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTTCCCCCTCCCACAAGTACTGCCAAGGCCGTTAAAACTGCGTAAAAACGTTGGGAGCGGGCAAGCCCGCGGAGCGGGCCGTAACGAAATAAAATTaa > 2:2382818/1‑149 (MQ=255) ccGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCGCACCCACAACTACTGCAAAGTCCCTGAAACCGGCCGAATACCGGGGGGAGCCGGCCAGCCCCCGAAGAGGCCCGTACCGACaaaaaaaaact > 1:5123182/1‑145 (MQ=255) gCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGCGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGGACGGCCAAGTCCGTGAAACCGGCGTAATACCGGTGGGTGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACCTAAAAATACagt > 2:1430876/1‑150 (MQ=37) gTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGCGCGGGCAACCCCGCGAAGAGGCCGGTACAGACAGACAATTACTGTTCCt > 2:4978809/1‑150 (MQ=38) tCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACCAGGACAGCAAAGTCCTTGTAACCAGCGTAATACCAGTGGGAGCGGGCAAGCCCCCCAAGAGGCCCGTACAGACATAAAAATAAAGTGCCtt > 1:3236543/1‑150 (MQ=255) gAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtggga > 2:727791‑M2/1‑91 (MQ=255) gAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtggga < 1:727791‑M2/98‑8 (MQ=255) catgTCCAGCGGCGCCTGTATGGGCCTCTGCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAATTCCTTGAAACCTGCGTAATACCTGTGGGAGGGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAac < 2:1279569/147‑1 (MQ=255) tCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCGCACCCACAAGTACAGCAAAATACGTTAAAACGGCGTAATAACAGTGGGAGCGGGCAACCCCCCGAAGATGCCCGTACAGAAAAAAAAATAAAGTGGCGTGCCAAAAACCt > 2:1937509/1‑150 (MQ=255) gcggcgCCTTTCTGGGCCTCTTCGCGGGCTTGCCCGCTCCCACACGTACTGCAACGTCCTTGAAACCTGCGTATTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTc < 2:1834265/150‑1 (MQ=38) tATGGGCCTCTTCGCGGGCGTGCCCCCTCCCACAAGGACTGCAAAGTCCAGGTAACCGGCGTCATACCTGGGGGAGCGGGCACGCCCCCGCAGAGGCCGGGACAGCCAGAAAATTACAGTGCCTTGCCAACCACCGTGTCCACATGGGcc > 2:3228105/1‑150 (MQ=255) tGGGCATCTTCGGGGGCTTGCCCGCCCCCAACCGTACTGAAAAGTCCTTCAAACCTGCGTAATCCCTGTGGGAGCGGCCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTc < 1:2720421/150‑1 (MQ=38) ggggCCTGTCCGCGGGCTTGCCGGCCCCCACACGTACTGAAACGCCCTTCAAACCGGCGTATTCCGTGGGGGTGGGGGCACGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTc < 2:1862573/149‑1 (MQ=255) TCTTCGCGGGCATGCCCGCTCCCACAAGTACTGCAAAGTCCTTGTAACCTGCGGAATACCTGTGGGAGCGGGCAAGCCCGCGAAGATGCCGGTACAGACATACAATTACTGTGCCTTGCCAAACACCGTGTCCAGATGGGCCGCATAAGc < 2:2220048‑M1/150‑1 (MQ=255) ttCGCGGGCTTGCCCCCTACCACAAGTAATGCAAACTCCATGAAACCAGCGTAATAAATGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGTACAGACAAAAAATTACTGTTCCGTGCCAAAAACCATGTCCAGATGGGCCTCAAAAGcag > 2:3438656/1‑148 (MQ=25) TTCGCGGGCTTGCCCGCTCCCACAAGTACAGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTg < 2:1368686‑M1/150‑1 (MQ=255) gggggCGTGCCCGGACCCACAAGTACTGCAACGCCCTGGAACCCTGCTTTCTCCGGGGGGGCGCGGGCACGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCa < 2:3780935/148‑1 (MQ=255) GGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAAc < 1:1551649‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAAcgccg < 2:4289120‑M1/150‑1 (MQ=255) gCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctga < 2:5355384‑M2/150‑104 (MQ=255) gCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgc > 1:3785896‑M2/1‑47 (MQ=255) CCCACTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGccgccg < 2:4279265‑M1/150‑1 (MQ=255) ccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctgatg < 1:2844689‑M2/150‑106 (MQ=255) ccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctgatg < 1:4163857‑M2/150‑106 (MQ=255) GCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGca < 1:173032‑M1/150‑1 (MQ=255) GCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGca < 2:2459428‑M1/150‑1 (MQ=255) CCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATc < 1:1120333‑M1/150‑1 (MQ=255) CACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATcc < 2:2025142‑M1/150‑1 (MQ=255) CACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATcc < 2:1084737‑M1/150‑1 (MQ=255) ACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGTAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCg < 1:1328205‑M1/150‑1 (MQ=255) ACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCg < 2:5234885‑M1/150‑1 (MQ=255) tGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtc < 1:2025142/150‑1 (MQ=255) tGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtc > 2:2875412/1‑150 (MQ=255) tGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCCGCCAACGCCGCCGGCACATCCGGGCGCTtc > 1:80001/1‑150 (MQ=255) cAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCTGCCGGCACATCCGGGCGCTtcat > 1:4823531/1‑150 (MQ=255) cAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtcat > 1:5569834/1‑150 (MQ=255) aaaGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtcatc > 2:2471227/1‑150 (MQ=255) aGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATcac > 2:3176253/1‑150 (MQ=255) tCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACAt > 2:3433914/1‑150 (MQ=255) cTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATcc > 1:2586743/1‑150 (MQ=255) cTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATcc > 2:3513947/1‑150 (MQ=255) ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCca > 1:3324638/1‑150 (MQ=255) ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCca > 1:3324689/1‑150 (MQ=255) ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCca > 1:2336315/1‑150 (MQ=255) tGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCcac < 2:4659448/150‑1 (MQ=255) gAAACCTGCTTAATACCTGTGGGAGGGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCcaca < 2:1111297/150‑1 (MQ=255) gAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCcaca > 2:2752050/1‑150 (MQ=255) aaCCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGc < 2:5123182/150‑1 (MQ=255) tGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAgg > 2:3144257/1‑150 (MQ=255) tGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCAGCACATCCGGGCGCTTCATCACATCCACAGCCAgg > 1:3862180/1‑150 (MQ=255) | GTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGG > NC_002947/5293295‑5293593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |