| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,334,393 | T→A | 5.2% | L10Q (CTG→CAG) | PP_4690 → | Rieske 2Fe‑2S family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,334,393 | 0 | T | A | 5.2% | 987.4 / 28.1 | 297 | L10Q (CTG→CAG) | PP_4690 | Rieske 2Fe‑2S family protein |
| Reads supporting (aligned to +/- strand): ref base T (140/138); new base A (9/7); total (149/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.18e-01 | |||||||||||
Only 100 of 300 total aligned reads displayed.
GCCTTGTGGCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCG > NC_002947/5334244‑5334542 | gCCTTGTGTCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCt < 2:4856275/150‑1 (MQ=255) ccTTGTGGCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTg < 2:260561/150‑1 (MQ=255) gCGAGCGGCGGAACTGCGCACCATAGGCAGCCGAGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAgg < 1:1622557/150‑1 (MQ=255) cGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACAGCCCTCGGCCAGGCCGAggg < 1:5020535/150‑1 (MQ=255) gAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGc < 2:609667/150‑1 (MQ=255) gAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGc > 2:5189093/1‑150 (MQ=255) aGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCAGGCCGAgggat < 2:1747516/150‑3 (MQ=255) aGCGACGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCACTTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACAGCCCTCGGCCAGGCCGAgggat < 2:3877552/150‑3 (MQ=255) tcaggcaCTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTGTGTACATCCCTCGGCCTGGCCGAGGGCCaaa > 2:2494190/7‑150 (MQ=255) ggcggAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCaaa < 1:1800481/150‑1 (MQ=255) aaCTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCcgc < 1:1162733/150‑1 (MQ=255) aaCTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATAAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCcgc < 2:3366608/150‑1 (MQ=255) cTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCgcgc < 1:687319/150‑1 (MQ=255) tGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGcc > 1:4054761/1‑150 (MQ=255) ccATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGc < 2:3551589/150‑1 (MQ=255) ccATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGc < 2:503335/150‑1 (MQ=255) cATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCg > 1:2577113/1‑150 (MQ=255) cATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCg > 2:2073111/1‑150 (MQ=255) aTAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGt > 2:3913809/1‑150 (MQ=255) gcggCAGCCGGGCGCAGAGAATGCGATCAATTGGATAATTAGGCGCAGTGGAGCGTCAAGCCATCACGTGTGTCACGGGTCCGCCTTGCCCAGCACGTCCTTGGTACATCCCTCGGCCGGGCCGAGGGCCAACGCCGCGCCTTCAGCGTa < 1:5465078/148‑1 (MQ=255) gCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGAc < 1:2150902/150‑1 (MQ=255) gCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGAc > 1:3963369/1‑150 (MQ=255) cAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACg < 2:3431841/150‑1 (MQ=255) gggCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTc < 2:4302494/150‑1 (MQ=255) gggCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTc > 1:4141201/1‑150 (MQ=255) gggCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTc < 2:340276/150‑1 (MQ=255) gggCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTc < 1:2535170/150‑1 (MQ=255) gggCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTc < 2:4182616/150‑1 (MQ=255) cgcAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGaa < 2:773821/150‑1 (MQ=255) cgcAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACAGCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGaa < 1:1193361/150‑1 (MQ=255) agagAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTg > 2:3615295/1‑150 (MQ=255) agagAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCAATTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTg > 2:4602788/1‑150 (MQ=255) agaATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGtt < 2:1583856/150‑1 (MQ=255) taaTGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTc < 1:4735161/149‑1 (MQ=255) gaATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTc < 2:3184626/150‑1 (MQ=255) aTGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCgg > 1:2220379/1‑150 (MQ=255) aTGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCgg > 1:90667/1‑150 (MQ=255) aTCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgc > 2:3573962/1‑150 (MQ=255) aTCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgc > 1:3286058/1‑150 (MQ=255) aTCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgc < 1:584441/150‑1 (MQ=255) tCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgcg > 1:2351013/1‑150 (MQ=255) aaTTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTc > 2:2030439/1‑150 (MQ=255) aaTTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTc > 2:2654756/1‑150 (MQ=255) aTTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCg > 1:5541649/1‑150 (MQ=255) gATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTTATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCaa < 2:4449049/150‑1 (MQ=255) gATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCaa > 1:188367/1‑150 (MQ=255) aTAATTATTCGCATTGGAGCTTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAg < 1:5393759/150‑1 (MQ=255) aTAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAg < 2:4537988/150‑1 (MQ=255) aaTTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGc < 1:1935793/150‑1 (MQ=255) ttattCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCa > 1:5209690/1‑150 (MQ=255) attCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGTACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgc < 2:5630443/135‑1 (MQ=255) gCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgta < 1:4578546/150‑1 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 1:2896045/150‑1 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 2:2529208/150‑1 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 1:1440976/150‑1 (MQ=255) ttGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacct > 1:3149136/1‑150 (MQ=255) ttGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacct > 1:1685969/1‑150 (MQ=255) gAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacctgta > 2:4789660/1‑150 (MQ=255) tCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCa > 2:4012875/1‑150 (MQ=255) gCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCg < 2:4359685/150‑1 (MQ=255) cATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCt > 2:1020212/1‑150 (MQ=255) cACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGcc < 2:3709424/150‑1 (MQ=255) gtTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCAc < 1:3740213/150‑1 (MQ=255) tttCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCAcc > 1:278183/1‑150 (MQ=255) tCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 2:325377/123‑1 (MQ=255) aCGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGa < 2:3044926/150‑1 (MQ=255) gggTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACa > 1:4826948/1‑150 (MQ=255) gTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGCCATc > 1:1015324/1‑150 (MQ=255) gTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATc > 2:2921147/1‑150 (MQ=255) cATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATccc < 2:433255/150‑1 (MQ=255) aTCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCg < 1:3358272/150‑1 (MQ=255) ccTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCt < 2:875448/150‑1 (MQ=255) ccTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCt < 1:5610535/150‑1 (MQ=255) ttGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAg > 2:4267297/1‑99 (MQ=255) ttGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAg < 1:4267297/99‑1 (MQ=255) ccATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACt > 2:5527218/1‑150 (MQ=255) aTGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTgg > 2:5391310/1‑150 (MQ=255) tGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTggg < 2:409397/150‑1 (MQ=255) tGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTggg < 2:4204036/150‑1 (MQ=255) aCTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCCGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCag > 1:5110063/1‑150 (MQ=255) aCTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCag < 2:1872607/150‑1 (MQ=255) cTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCaga < 1:382793/150‑1 (MQ=255) ttCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAg < 2:2200196/93‑1 (MQ=255) ttCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCagag > 1:322124/1‑150 (MQ=255) tttGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCaga < 1:4511079/145‑1 (MQ=255) ttGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGAcgc < 1:3541202/150‑1 (MQ=255) ttGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGAcgc < 1:1276628/150‑1 (MQ=255) tACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCaga < 1:5284311/141‑1 (MQ=255) tACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCaga > 2:5284311/1‑141 (MQ=255) aCATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCTGCGTAGACGGCCTCGATCTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACAGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGTCAGAGGACGCGttt < 1:4426856/150‑1 (MQ=255) ctCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCCAGGCCAGGTGTACCTGTACCGCCACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCt < 2:1306448/149‑1 (MQ=255) aTCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCt > 1:2415987/1‑150 (MQ=255) aTCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCt > 1:1375082/1‑150 (MQ=255) tCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTg < 2:3963369/150‑1 (MQ=255) cccTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTgg < 2:2351305/150‑1 (MQ=255) cccTCGGCCAGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCATAGGACGCGTTTCTgg > 2:181627/1‑150 (MQ=255) cTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGAt > 2:2127174/1‑150 (MQ=255) cGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGACCTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGa > 2:147835/1‑150 (MQ=255) ccTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACAGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAg > 1:4814289/1‑150 (MQ=255) tGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAgcg > 2:4652614/1‑150 (MQ=255) | GCCTTGTGGCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCG > NC_002947/5334244‑5334542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |