| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,464,557 | T→G | 7.1% | intergenic (+18/‑22) | PP_4795 → / → holA | lipoprotein/DNA polymerase III subunit delta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,464,557 | 0 | T | G | 7.1% | 657.2 / 12.2 | 251 | intergenic (+18/‑22) | PP_4795/holA | lipoprotein/DNA polymerase III subunit delta |
| Reads supporting (aligned to +/- strand): ref base T (119/107); new base G (17/6); total (136/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.68e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
CCGCCCCAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCCGCGCGTCA > NC_002947/5464408‑5464706 | ccGCCCCAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCt > 1:1693462/1‑150 (MQ=255) ccccAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCgg < 1:5616887/150‑1 (MQ=255) ccccAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCgg < 1:685091/150‑1 (MQ=255) cccAACTTGATGATCTGCATCGTAAAGCAGACGAGCGCGCCCAATCCGAATCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCggg < 1:1906143/150‑1 (MQ=255) cccAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCggg > 1:3743449/1‑150 (MQ=255) cccAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCggg > 1:2028944/1‑150 (MQ=255) ccAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGgc > 1:3122747/1‑150 (MQ=255) ccAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGgc < 2:5553996/150‑1 (MQ=255) aCTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGcc > 1:5497558/1‑150 (MQ=255) tGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGcccc > 2:4149860/1‑150 (MQ=255) tGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGcccc > 1:2125420/1‑150 (MQ=255) gATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGc > 2:4825829/1‑150 (MQ=255) gATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGc > 1:3785670/1‑150 (MQ=255) tGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGC‑GGGGCGCCCGAGGGCGcccctcgc < 1:396488/150‑5 (MQ=255) tGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGAGGGCGcccctcgc < 1:3374819/150‑5 (MQ=255) tGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTcc < 2:2042090/150‑1 (MQ=255) gCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTccc < 2:3854937/150‑1 (MQ=255) cAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCGGTTcccc > 1:2690337/1‑150 (MQ=255) aGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCa < 1:4887117/150‑1 (MQ=255) aGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCa < 2:1390120/150‑1 (MQ=255) gTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGa > 2:607924/1‑150 (MQ=255) aaGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAAc > 2:2123024/1‑150 (MQ=255) gCAGACGAGCGCGCCCACGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGACGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTc < 2:172631/150‑1 (MQ=255) gCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCTGTTCCCCAAGAAACTc > 1:4943595/1‑150 (MQ=255) cAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCTGGTCCCCAGGAAACACg > 1:1523407/1‑150 (MQ=255) aGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGc > 2:4591315/1‑150 (MQ=255) gACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGcc < 2:4847380/150‑1 (MQ=255) gACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGcc < 2:2468319/150‑1 (MQ=255) aCGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCGGGTCCCCCTGAACCACGccc > 1:124104/1‑150 (MQ=255) aCGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCTGTTCCCCAAGAAACGCGccc > 1:310055/1‑150 (MQ=255) aGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCg < 2:2863397/150‑1 (MQ=255) tgcgcCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACACGCCCCCGcc > 2:3154277/2‑150 (MQ=255) ccAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAAcg > 1:4680647/1‑149 (MQ=255) aaGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTcccc < 2:5103010/125‑1 (MQ=255) aaGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTcccc > 1:5103010/1‑125 (MQ=255) aGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTcaa < 2:1766826/150‑1 (MQ=255) gCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCGGGTGCCCAAGAAACTCGCCCCCGCCCCAcgccac > 1:178156/1‑145 (MQ=255) cGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTcaacaa < 2:2765208/150‑1 (MQ=255) cGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGAAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTcaacaa < 2:1546177/150‑1 (MQ=255) gCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGTAAGTACCGGGCAACTAAGCCCGCGT‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCAc < 1:3527027/150‑1 (MQ=255) gCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCAc < 1:4649009/150‑1 (MQ=255) cTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACGCAACAAGCAcc > 1:1332521/1‑150 (MQ=255) tGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCGGGTCCCCAAGAAACACGCCCCCGCCCCACACAACAaccacca > 1:2362019/1‑149 (MQ=255) gcttgcTGGCGGCGGGCAGCCTCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCGGTTGCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCtcc > 1:1057559/5‑148 (MQ=255) gcgcTGGAGGCTGCCCGCCGCCAGCAAGCCGTGACGCCTCAGCAATCGCCACTGGAAGTACCGGGAAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCaa < 1:2494022/150‑1 (MQ=255) gcgcTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCaa < 2:2356418/150‑1 (MQ=255) cgcTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAg < 1:2762316/150‑1 (MQ=255) gcTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAgg < 2:420695/150‑1 (MQ=255) tGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGgc < 2:2155670/150‑1 (MQ=255) tGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCAGCAAGgcg > 1:4844878/1‑150 (MQ=255) tGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACGCAACAAGCACCAGCAAGgcg > 1:915264/1‑150 (MQ=255) ggCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCt < 2:3588728/150‑1 (MQ=255) ggCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCt < 1:2553001/150‑1 (MQ=255) tGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGc < 2:4362103/150‑1 (MQ=255) gCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGTAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCa > 1:3655591/1‑150 (MQ=255) cccGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTca < 2:1343847/123‑1 (MQ=255) ccgccgCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTcccc < 1:3857905/97‑1 (MQ=255) ccgccgCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCGGGCAcc > 2:5381811/1‑150 (MQ=255) ccgccgCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCAGCAAGGCGCCCTGGCAcc > 1:4677693/1‑150 (MQ=255) ccgccgCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCCCCTGTTCCCCATGAAACACGCCCCCCCCCAACTCAACAAGCACCTGCAAGGCGCCCAGGCAcc > 1:2967983/1‑150 (MQ=255) cgccgcCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCg > 1:5111305/1‑150 (MQ=255) cgccgcCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCg < 2:5323066/150‑1 (MQ=255) cgccgcCAGCAAGCCGAGACGCCTCAGCAAGCGCCACGGGACGTACCGGGCAACTAAGCCCGCGC‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCg < 1:4278512/150‑1 (MQ=255) ccgccAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGt < 2:788845/150‑1 (MQ=255) aGCAAGCCGCGACGCCTCCGCACTCGCCCCGGGAAGTACCGGGCAACTACGCCCGCGA‑GGGGCGCCCCCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACCCGCACCTGCAAGGCGCCCTGGCACCGGTCTACg < 2:192219/150‑1 (MQ=255) aGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACg > 2:3710615/1‑150 (MQ=255) gCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGt > 1:3247963/1‑150 (MQ=255) cAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCCACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTg > 2:2425218/1‑150 (MQ=255) cAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTg < 2:1971613/150‑1 (MQ=255) cAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTg < 1:75398/150‑1 (MQ=255) aaGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCTGTTCCCCATGAAAATCGCCCCCCCCCAACGCAACAAGCACCAGCCAGGCGCCCAGGCACCCGTCTACGTgg > 1:18252/1‑150 (MQ=255) aGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGt < 2:4252608/150‑1 (MQ=255) gCCGATACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAAATCAACAAGCACCAGCAAGGCGCCCTGGCACCGGTCTACGTGGTc > 2:1837524/1‑150 (MQ=255) ccGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCa > 2:4013182/1‑150 (MQ=255) gagaCGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCGCCATGAAACTCGGCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCAGGCACCGGTCTACGTGGTCAGt > 1:5296010/1‑150 (MQ=255) gagaCGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGcc > 2:5556853/1‑126 (MQ=255) gagaCGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGcc < 1:5556817/126‑1 (MQ=255) gagaCGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGt < 1:886976/150‑1 (MQ=255) gCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGcga < 2:494957/150‑1 (MQ=255) gCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCGCGGGCGCCCCGCCAGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCAGGCACCGGTCGACGTGGTCAGTGGcga > 1:1047267/1‑150 (MQ=255) tCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCgctg > 1:894760/1‑150 (MQ=255) tGGAAGGACCGGGCAACTCAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGcc < 2:2882820/150‑1 (MQ=255) gAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAg < 1:4458788/150‑1 (MQ=255) ggCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACGCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAgccgcc > 1:1349595/1‑150 (MQ=255) aaCTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGAc < 1:2889372/150‑1 (MQ=255) aaCTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTACCCATGAAAATCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTAAGTTGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAATCCGCCGAc > 1:5315244/1‑150 (MQ=255) aCTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCAGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCCGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACg > 1:826354/1‑150 (MQ=255) aaGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCa < 1:4149860/150‑1 (MQ=255) aGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCAGCAAGGCGCCCAGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCAGCTGTGCCAGGAAGCCGCCGACGCCaa > 1:2209909/1‑149 (MQ=255) aGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACACAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCAGCTGTGCCAGGAAGCCGCCGACGCCaa > 2:1138070/1‑149 (MQ=255) ccGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATccc > 2:3898065/1‑149 (MQ=255) cgcggggCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCaa < 1:776154/147‑1 (MQ=255) ggggCGCCCGAGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGc > 2:514256/1‑150 (MQ=255) gcgcCCTCGGGCGCCCCGCCTGTTCCCCATGAACCGCGCCCCCGCCCCACTCAACAAGCACCTGCCAGGCGCCCTGGCCCCGGGCGCCGGGGGCCGTGGCGACGACCCGCTGCGGTGCCAGGACGCCGCCGCCGCCCGCCGCAAGGCcgc > 2:2939366/1‑150 (MQ=255) gcgcCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCcgc > 1:4564840/1‑150 (MQ=255) gcCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCcgcgc > 2:5317554/1‑150 (MQ=255) cccTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCcgcgcg > 2:5446726/1‑150 (MQ=255) ccTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCCGCGCGt > 1:2391006/1‑150 (MQ=255) ccTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCCGCGCGt > 2:5586443/1‑150 (MQ=255) cTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCCGCGCGTc < 2:3372706/150‑1 (MQ=255) | CCGCCCCAACTGGATGAGCTGCAGCGTAAAGCAGACGAGCGCGCCCAAGCCGAAGCTGCCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGA‑GGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCCCGCCCAACTCAACAAGCACCTGCAAGGCGCCCTGGCACCGGTCTACGTGGTCAGTGGCGACGACCCGCTGCTGTGCCAGGAAGCCGCCGACGCCATCCGCAATGCCGCGCGTCA > NC_002947/5464408‑5464706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |