| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,467,260 | T→C | 5.3% | D401D (GAT→GAC) ‡ | PP_4798 → | membrane‑bound lytic murein transglycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,467,260 | 0 | T | C | 5.3% | 858.5 / 21.9 | 264 | D401D (GAT→GAC) ‡ | PP_4798 | membrane‑bound lytic murein transglycosylase |
| Reads supporting (aligned to +/- strand): ref base T (106/144); new base C (10/4); total (116/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
Only 100 of 265 total aligned reads displayed.
CTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCT > NC_002947/5467111‑5467408 | cTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGAt < 1:4105670/150‑1 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg < 2:2852986/150‑1 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg < 2:3044198/150‑1 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg > 1:21077/1‑150 (MQ=255) ggTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCAt > 2:2177661/1‑150 (MQ=255) ggTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGAACTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCAt > 2:2240053/1‑150 (MQ=255) cTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCggg < 1:2160403/150‑1 (MQ=255) ggggATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAAt > 2:3396391/1‑150 (MQ=255) gATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCC‑CTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAccc < 2:3088684/150‑1 (MQ=255) aTCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAccc > 2:1826549/1‑150 (MQ=255) gCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCa > 1:1283619/1‑150 (MQ=255) cgtCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCaa < 2:5099399/148‑1 (MQ=255) cTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCaa < 1:2988534/150‑1 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg > 2:3642447/1‑150 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg > 1:2484387/1‑150 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg > 1:905308/1‑150 (MQ=255) cAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCATCGGCATTac > 2:2117431/1‑128 (MQ=255) gCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCaa < 1:747397/150‑1 (MQ=255) gggCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCaa > 1:4187440/1‑150 (MQ=255) cTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGc < 1:2625872/150‑1 (MQ=255) ttCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGcc > 2:453385/1‑150 (MQ=255) ttCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGcc > 1:518428/1‑150 (MQ=255) tCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGccc < 1:1555344/150‑1 (MQ=255) tCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGccc < 1:2808724/150‑1 (MQ=255) cATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCa < 2:5550756/150‑1 (MQ=255) cATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCa < 2:1151756/150‑1 (MQ=255) aTTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAg > 1:3234816/1‑150 (MQ=255) aTTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAg > 1:627210/1‑150 (MQ=255) ttGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGc > 2:2602852/1‑150 (MQ=255) gaaGCTGGCCGAAAGAGGACCTGCAGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGACGCGGGCATGATGCGCGTAATGCCGATGGCATTATCGGGGCCAATACCCGAAAGGCAATCCGCAATGCCCAGCAAgcgc > 2:3966032/3‑150 (MQ=255) gCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTgg < 2:1737128/150‑1 (MQ=255) tGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGa > 2:3081671/1‑150 (MQ=255) tGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGa > 2:1806228/1‑150 (MQ=255) gCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATg < 1:4269633/150‑1 (MQ=255) gCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATg < 2:2466001/150‑1 (MQ=255) gCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATg < 2:1027993/150‑1 (MQ=255) gAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAGGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGcc > 1:2842914/1‑150 (MQ=255) gAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGcc > 2:2839785/1‑150 (MQ=255) aaGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCcgg < 1:3396391/150‑1 (MQ=255) gagGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCcggcg < 1:1501077/150‑1 (MQ=255) agGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCaa < 2:919039/121‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 1:5624600/150‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 2:4152170/150‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 1:4614607/150‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt > 1:5076908/1‑150 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 1:1105351/150‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 2:4685700/150‑1 (MQ=255) aCCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATg < 2:1573800/150‑1 (MQ=255) ccTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATgg < 2:2756681/150‑1 (MQ=255) ccTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATgg < 2:256643/150‑1 (MQ=255) tGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCt < 2:3710998/150‑1 (MQ=255) gCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTACTGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTa < 2:5286139/150‑1 (MQ=255) gCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTa > 1:3065729/1‑150 (MQ=255) ccGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAc > 2:3305517/1‑150 (MQ=255) cAGCCGCACCGAGTGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGAc < 2:1793609/150‑1 (MQ=255) gCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGAccc > 2:48679/1‑150 (MQ=255) cACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACaa < 1:703384/150‑1 (MQ=255) cGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgct < 1:541625/150‑1 (MQ=255) cGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgct < 1:3354700/150‑1 (MQ=255) cgcATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCtt < 2:3682090/150‑1 (MQ=255) cgcATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCtt < 1:4314111/150‑1 (MQ=255) cgcATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCtt < 1:881712/150‑1 (MQ=255) cATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGAAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTga < 1:395180/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:1962710/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 1:2005504/150‑1 (MQ=255) ggAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGagag > 1:2117013/1‑150 (MQ=255) gTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga > 2:1313941/1‑146 (MQ=255) tGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTgc < 1:5348318/150‑1 (MQ=255) gCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTgcg > 2:605350/1‑150 (MQ=255) cAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTgcgc > 2:7682/1‑150 (MQ=255) aaCTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcag > 1:4419507/1‑150 (MQ=255) cTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGGGCCTGCGCcagca < 2:4476842/150‑1 (MQ=255) cTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcagca < 1:3621600/150‑1 (MQ=255) cTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcagca < 1:1360200/150‑1 (MQ=255) ttGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcagcag > 2:4930343/1‑150 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 2:3427520/150‑1 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAAGACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 2:4702579/150‑1 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg > 2:5017530/1‑150 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg > 1:5590448/1‑150 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg > 2:873806/1‑150 (MQ=255) gAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGc > 1:4557123/1‑150 (MQ=255) aaCAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCa < 1:2378384/150‑1 (MQ=255) aGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTc < 2:4331938/150‑1 (MQ=255) gCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTcc < 1:2358139/150‑1 (MQ=255) cgcgGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCgg > 1:4792068/1‑150 (MQ=255) gcgGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCggg < 1:2602852/150‑1 (MQ=255) gcgGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCggg < 2:1202896/150‑1 (MQ=255) gCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCg < 2:5403593/150‑1 (MQ=255) gatgCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTgc < 1:1826549/150‑1 (MQ=255) cccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 1:4954628/6‑150 (MQ=255) ccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCgg > 2:2335708/5‑150 (MQ=255) ccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCgg > 1:4393680/5‑150 (MQ=255) cGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt > 2:4321884/1‑83 (MQ=255) cGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCgg < 2:4407767/150‑1 (MQ=255) gTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGccc < 2:1445191/150‑1 (MQ=255) aTGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCgg < 1:3830947/150‑1 (MQ=255) ccGATGGCATTATCGGGGCCAAGACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaat < 1:5015401/150‑4 (MQ=255) cGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTatg < 1:4927862/150‑3 (MQ=255) cGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAt > 2:413752/1‑150 (MQ=255) cGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCAGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaac < 1:1776297/150‑2 (MQ=255) | CTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCT > NC_002947/5467111‑5467408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |