| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,108 | A→T | 16.9% | intergenic (+78/‑210) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,108 | 0 | A | T | 16.9% | 247.1 / 34.3 | 103 | intergenic (+78/‑210) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (38/46); new base T (2/16); total (41/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.44e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
GTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACT > NC_002947/444959‑445256 | gTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGAcaacaa < 2:2917915/150‑1 (MQ=255) tCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAt < 2:1577109/150‑1 (MQ=255) tCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAt < 2:4413589/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtt < 1:3617850/150‑1 (MQ=255) gAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAttt < 2:3816084/150‑1 (MQ=255) gAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAttt > 2:2784785/1‑150 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:5145918/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:2282579/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:2589555/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:4255056/150‑1 (MQ=255) cTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGt < 1:3335278/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 1:1251031/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 2:1807690/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 1:5229864/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 1:4160490/150‑1 (MQ=255) cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCCGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCt < 2:3110078/150‑1 (MQ=255) cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCt < 2:2985085/150‑1 (MQ=255) cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCt < 2:4741154/150‑1 (MQ=255) cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGACATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCt < 2:1907877/150‑1 (MQ=255) cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGt < 2:5274576/150‑1 (MQ=255) cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGt < 1:3449588/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTc < 2:1258736/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGACCAGACAAAATTGTTGTCTGATc < 1:723798/150‑1 (MQ=38) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 1:4117213/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGACCAGACAAAATTGTTGTCTGATCgga < 1:3107169/150‑2 (MQ=38) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc < 1:672064/150‑1 (MQ=255) aaGGCATCCGACGTAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgc < 2:1766905/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 1:2911739/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 2:1407726/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 2:4821987/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGATCGGGCCTCTTcgcg < 2:1681925/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 1:194743/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:5412391/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 1:1204938/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:876958/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:3212445/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:4157365/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:4157505/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:3770429/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:4304320/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCAGCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:4112229/150‑1 (MQ=18) cATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGc < 2:2034019/150‑1 (MQ=255) aTCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGt < 2:2552364/127‑1 (MQ=255) aTCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGt > 1:2552364/1‑127 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGc < 2:1817981/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTACTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGc < 2:3572334/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGGGTGGCCCCGCGTGCGGCCGCTGAGACAACAAATTTGTTTGGTGGGGGCGGGTGGCGGGCGAGcc > 1:2324838/1‑150 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTGGCCGCCAAATCCTACCAGCAGACAAAAAAATTTTGTTGTCGGGCCGCGTAGCGGGGCAGcc > 2:3957249/1‑150 (MQ=255) cacaTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGc < 2:5403666/147‑1 (MQ=17) tGGCCGGATCAGCGACACCTCCGCCTGATTCCTTGCGACATCCCCAATGTCCGCGCCGGCCTGTTAGGAGG‑GGGCTTGCCGGCGAATGCGTCCGATCAGACAACAATTGTGTCTGGTCGGGCCTCTGCGGGGGCAAGCCCGCTCCTACaa < 2:4603851/150‑1 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGGGTGGCCGCGAATGCGTGCGCGCAGAAAACAAATTTTTTGTGTGGGGGCGCATCGCGGGCCAGCCCCCGCCAACAAggg > 1:4689737/1‑150 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTGCCCCCGCAAGCGGCCGCTCCGACAACAAATTTGTGTGGGGGGGCCCCGTAGCCGGCCCCCCCCCGCCGACAAGGGGTTGttgcatg > 2:4056404/1‑150 (MQ=255) cGCCTTAATCCTGGCGTCACCCCCTTTTCCCGCGCCTGCCTTGTCGGCGG‑GGGCTTGCCCGCGAATGCGTCCGATCACACAACATTTTTGTCTGGCGGGGCCTCTGCGGGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAc < 2:809002/150‑1 (MQ=255) taggtGCGTCAGCCCCTCTTTCCGCGCCTGCCTTGTCGGAGC‑GGGCTGGCCGGCGATTGCGGCCTAACAGACAACAATTTTGTCTGGTGGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGc < 2:3586329/146‑1 (MQ=37) ttGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtt > 2:801827/1‑76 (MQ=255) ttGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtt < 1:801827/76‑1 (MQ=255) cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTTGCCC‑CGAAAGCGTGCGCGAACACAAAAAATTTTTGTGGTGGGGGCGCATCGCGGGCCACCCCCCCCCGAAAAAGGTTTTTGGGCTGGGCTGACTGATTTTGCATATTTAGTggg > 2:801340/1‑149 (MQ=255) gggggCTGGCCCGCTAATGCGTCCTATCATACAAAATTTTTGTGTGGTGGGGCCTCTGCGGGGGAAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGa < 2:4352607/148‑1 (MQ=255) cTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTGTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGGCATTTTTAGTGGCGTAAATGGCACCATAGTCCATGCTTGTCAGaa > 1:1884627/1‑150 (MQ=39) ttGCCCGCGAATGCGTCCGATCAGACAACACTTTTGTCTGGTCGGGCCTCTTCGCGGGCACGCCCGCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCAGCCTTGACAGaaa > 2:4233466/1‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:4247945/1‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 2:4613510/1‑150 (MQ=255) cccGCGAATGCGGCCGATCAGACAACAATTTTGTCTGGGCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACCAGGGGTTGTGGCATGGCCTGACTGATTTGCCATTGTTCGTGGCGTAACTGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:4500755/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:47859/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4098516/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3691341/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:4005791/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:5083390/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:505203/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1625300/1‑150 (MQ=255) cgcttctGCGTCCGATCACACAACATTTTTGTCTGGGGGGGCCTCTTCGGGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 2:573561/144‑1 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:2162057/1‑150 (MQ=255) gcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 1:4645511/1‑150 (MQ=255) aTGCGTCCGATCAGACAACAATTTGGTCTGGTCGGGCCTCTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa < 2:2761777/150‑1 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGGGTAATTGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTATACGt > 2:5131424/1‑150 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 2:5131403/1‑150 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:388435/1‑150 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:2732840/1‑150 (MQ=255) tCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:2387092/1‑150 (MQ=255) tCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 1:4169633/1‑150 (MQ=255) ccGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 1:671542/1‑150 (MQ=255) cGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAg > 1:5625820/1‑150 (MQ=255) gaccAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 2:660355/4‑150 (MQ=25) tCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGttt > 2:5348431/1‑150 (MQ=255) cAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTc > 1:3378010/1‑150 (MQ=37) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAAc < 1:1661766/136‑1 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAAc > 2:1661766/1‑136 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:944308/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:944327/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:2244838/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:2244820/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:2049025/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:64445/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:5208931/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:5180570/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:3513060/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:1096222/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTAAaaca > 1:1096208/1‑150 (MQ=255) aaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 1:4415020/1‑150 (MQ=255) aaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 1:3758798/1‑150 (MQ=255) | GTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACT > NC_002947/444959‑445256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |