| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,490,151 | T→C | 32.5% | intergenic (+60/‑87) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,490,151 | 0 | T | C | 32.5% | 168.5 / 121.1 | 147 | intergenic (+60/‑87) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base T (29/63); new base C (24/21); total (58/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.09e-03 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GGTTCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAG > NC_002947/5490002‑5490300 | ttCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCGTGCCCGCG‑CAAAAGAtgg > 1:3653394/1‑150 (MQ=255) tCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGAtggt < 2:5144681/150‑1 (MQ=255) cGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCTCTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGAtggtg < 1:1008870/150‑1 (MQ=255) cGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGAtggtg < 1:4038857/150‑1 (MQ=255) cGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGAtggtg < 1:626683/150‑1 (MQ=255) cGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGAtggtg < 1:1008654/150‑1 (MQ=255) aTGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGa < 1:2566012/150‑1 (MQ=255) aTGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCGTGCCCGCG‑AAGAAGAtgggggg > 2:1319897/1‑149 (MQ=255) tGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTACTTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGAt < 1:4218646/150‑1 (MQ=255) tGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGAt < 1:4218857/150‑1 (MQ=255) tGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGAt < 1:4218854/150‑1 (MQ=255) gCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGAtt < 2:1695915/150‑1 (MQ=255) tGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAc < 1:4582101/150‑1 (MQ=255) tGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAc < 1:4581793/150‑1 (MQ=255) tGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAc < 1:4986663/150‑1 (MQ=255) tGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAccgc < 2:2285330/150‑1 (MQ=255) taccaaGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCAccatc < 2:3574434/146‑4 (MQ=38) gCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAccgcc < 1:476091/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTACCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCAccatc < 2:4152749/150‑4 (MQ=38) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCAccatc < 1:2650645/150‑4 (MQ=17) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCAccatc < 1:4287692/150‑4 (MQ=17) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCAccatc < 1:4287574/150‑4 (MQ=17) tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACcgccgc < 2:1986429/150‑1 (MQ=255) tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACcgccgc < 1:2642187/150‑1 (MQ=255) tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACcgccgc < 1:324358/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGTCATCGCTATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:940249/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:2268023/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:1107338/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:4706771/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGTATTCGCgg < 1:5555627/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:5248897/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:1580376/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:940288/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:4173117/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:1102012/150‑1 (MQ=255) tgctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCGTGGGCCCC‑CAGACGCTGGTGGATTGAACGCCCCAGTagcgcggca > 1:3704838/1‑145 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCa < 2:5149829/146‑1 (MQ=25) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCa > 1:5149829/1‑146 (MQ=25) gaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCGTTCCCGCG‑AATAAGATTGTGGGTTCACCGCCGCCATCGCGGGCCAACCCGCGccc > 2:2272638/1‑150 (MQ=255) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAc > 2:3286701/1‑119 (MQ=255) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCAc < 1:3286701/119‑1 (MQ=255) cGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGGGTGCCCGCG‑AAAAAGAAGGTGGATTGACCCCCCCATTAGCGGGCCACCCCCCTCCcacact > 2:2558193/1‑148 (MQ=255) cGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCGTTCCCGCG‑CAAACCATTGTGGATTCAACCCCCCCGTGGCGGGCAACCCCCCACCcacacg > 2:2558197/1‑148 (MQ=255) tGGTATACACTGGCTGGCGCCACTACCGCCACTAATTACGCGGACCCCGCGGCAGGTCGAGATC‑CTGTGGG‑CGCGGGCTGGCCCGCC‑AATCCTTTGGTGGATGCACCGCCGCATGCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCaa < 2:1699375/150‑1 (MQ=255) gggTCTTCACGGGCCTGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCACGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AAGACGATGGTGGTTTCACCGCCGCATGCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCaa < 2:5551022/149‑1 (MQ=38) ttCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGCTTCACCGCCGCATTCGCGGGCAAGCCCGCGCCCCCAGTGTTCGGCGCCAGCCAc > 2:4622048/1‑150 (MQ=255) ttCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATA‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:3054645/115‑1 (MQ=18) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGGGTGCCCCCGCAATACG‑GGGTTGGTTGACCCCCCCAATAGCGGGCCAAGCCGCGCCCCCACGGTTGGGCGCAAGcccccgggt > 2:1217694/1‑143 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCGTGCCCCCG‑AAAACGAAGGTTGTTTCACCGCCCCAATAGCGGGCAAGCCCCCGCCCCCCGGGTTGGGCGCCAGCCCCggggg > 2:4430220/1‑148 (MQ=255) gtcATGCGCCCCTTCCGCCACTAATGACGCGGATCCGGCGGCAAGTGTAGATC‑GTGTGGG‑AGGGGGGTTGCCCGCG‑AATACGTTGGTGGATTCACCGCCGCATTCGGGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATc < 2:3617981/148‑1 (MQ=255) gtcATGCGCCACTTCCGCAAGTTTTTTCGGTGTTCCCTTGTCTTGTCGAGATA‑CTGTGTG‑AGGGGGCTTGCCCTCT‑ATTACGATTGGGCTTTCACGGGCGATTTCGCGGGCATGCCCTCTCCCACAGTGTTCGGCGCAAGCCACGGGATc < 2:1368153/148‑1 (MQ=255) cttGCGCCACTACCGCCACTACTTACGCGGAGCCCGCGGCAAGGGGAGACC‑GTGGGGG‑CGCGGGCTTGCCCGCC‑AATAGGTGGGTGTATTCCCCGCCGCATTGGCGGCAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCAc < 2:18987/148‑1 (MQ=255) ccggcgcCACTGCCGCCACTATTTCGGGGTAGCCGGTGGCATGGGTTGTTC‑GTGGGGG‑CGGGGGCGTGCCCGCT‑ATTCCTTGGGTGGATCCCCGGCCGCTGCCGGGGCCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCAc < 2:18867/147‑1 (MQ=255) ccACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:4620336/150‑1 (MQ=255) aCGGGGTTCCCGTGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCT‑AATACGATGGTGTATTCACCGCCGCATTCGGGGGAATGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 2:5418466/150‑1 (MQ=38) aCGCGTAGCCCGTGGAATGTCTAGATC‑GTGTGGG‑CGGGGGGTGGCCGGCG‑AATACGTTGGTTGATACACCGCCGCATGCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 1:3624860/150‑1 (MQ=255) gATCCCGCGGCAAGTCGAGATC‑CTGGGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGTATTCACCGCCGCTTTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:453361/150‑1 (MQ=39) aTCCCGAGGCACGTCGAGATC‑CTGGGGG‑AGCGGGCTGGCCCGCG‑AATACGATGGTGTATTCACCGCCGCTTTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTg < 2:4979564/150‑1 (MQ=39) aTCCCGAGGCACGTCGAGAT‑‑CGGTGGGTAGCGGGCTTGCCCGCG‑AATACGTTGGTGGTTTCACCGCCGCATTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTg < 2:4412739/150‑1 (MQ=38) tC‑CTGTGGG‑AGCGGACTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 1:5472725/150‑1 (MQ=255) tC‑CTGTGGG‑AGCGGACTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 1:5472814/150‑1 (MQ=255) gtgGG‑CGGGGGCTGGCCCGCC‑AATACTTGGGTGTTTCCACCGCCGCTTTGGCGGGAACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:1283598/150‑1 (MQ=255) gCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGc > 2:2487142/1‑150 (MQ=255) gCTTGCCGGCT‑AATACGATGGTGTATCCCCCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg < 2:2855915/150‑1 (MQ=255) gCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 1:3223810/1‑150 (MQ=255) gCTGGCCCGCC‑AATACGTTGGTGGATTCACCGCCGCATTCGGGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg < 1:2778178/150‑1 (MQ=255) cTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctgg > 1:4160949/1‑150 (MQ=25) ttGCCCGCG‑ATTAGGTTGGTGTTTTCACCGCGGCTTGCGGGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc < 2:2520102/150‑1 (MQ=255) ttGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 1:2495329/1‑150 (MQ=255) ttGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 2:3197217/1‑150 (MQ=255) gCCTGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 1:4855805/150‑1 (MQ=25) cccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 2:1826825/1‑150 (MQ=255) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACGTGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4770857/1‑150 (MQ=25) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:476039/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4771478/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4238273/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:186700/1‑150 (MQ=37) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGAc < 2:4580628/99‑1 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAATGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:117288/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa > 2:3412980/1‑112 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 1:3412980/112‑1 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:2431781/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:4010579/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCAGTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3862261/1‑150 (MQ=255) ccGCG‑AAGGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCCCGGGACTCGAGGGGGTGACAGGAACGGTGTGATCATCGGCAGCGGTGGCCGGGAGCACGCccgggcctgg > 2:2448158/1‑150 (MQ=12) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:3048016/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:810413/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:1525425/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:575708/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:4476265/1‑150 (MQ=37) gcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:4031170/1‑150 (MQ=37) gcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4183493/1‑150 (MQ=37) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:2240138/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:5387626/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:1779980/1‑150 (MQ=255) ctACGAGGGTGGATCCCCCGCCGCTTCCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAAGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc < 1:1332142/149‑1 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc > 2:473748/1‑150 (MQ=255) aTACGAGGGTGGTTTCCCCGCCCCATGCGGGGGCAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc < 2:2929998/150‑1 (MQ=255) cgctggtggATCCACCGCCGCAGGCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGcc < 2:3011665/147‑1 (MQ=255) tggtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAg > 1:1191996/1‑150 (MQ=255) | GGTTCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGG‑AGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAG > NC_002947/5490002‑5490300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |