| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,490,168 | C→T | 29.0% | intergenic (+77/‑70) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,490,168 | 0 | C | T | 29.0% | 171.6 / 100.7 | 133 | intergenic (+77/‑70) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base C (43/49); new base T (24/14); total (67/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.16e-02 | |||||||||||
Only 100 of 144 total aligned reads displayed.
TGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGA > NC_002947/5490019‑5490314 | tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACcgccgc < 1:2642187/150‑1 (MQ=255)tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACcgccgc < 1:2642341/150‑1 (MQ=255)tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACcgccgc < 1:324358/150‑1 (MQ=255) gTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTc < 1:1981917/150‑1 (MQ=37) gTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTc < 1:4813911/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGTCATCGCTATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:940249/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:4064517/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:5102386/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:1107338/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:4706771/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGTATTCGCgg < 1:5555627/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:1580376/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:1102012/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:940288/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:5248897/150‑1 (MQ=255) tgctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCaa < 2:4975225/150‑1 (MQ=255) tgctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTGGGCCCC‑CAGACGCTGGTGGATTGAACGCCCCAGTagcgcggca > 1:3704838/1‑145 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCa > 1:5149829/1‑146 (MQ=25) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCa < 2:5149829/146‑1 (MQ=25) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGcc < 1:701047/150‑1 (MQ=25) cGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGGTGCCCGCG‑AAAAAGAAGGTGGATTGACCCCCCCATTAGCGGGCCACCCCCCTCCcacact > 2:2558193/1‑148 (MQ=255) cGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTTCCCGCG‑CAAACCATTGTGGATTCAACCCCCCCGTGGCGGGCAACCCCCCACCcacacg > 2:2558197/1‑148 (MQ=255) tcgggttGGTCTTCCGGGGCAGGCGCCCCTCCCGCCCATAATTACCCGAATCCCGCCCATATTCGTGATCCGGGGGGAGCGGGCTGGCCCGCT‑ATAACGTTGGTGGTTACACCGCCGCATTGGGGGCCAACCCCGCTCCCACAGTGTTCg < 2:137054/144‑1 (MQ=255) tGGTATACACTGGCTGGCGCCACTACCGCCACTAATTACGCGGACCCCGCGGCAGGTCGAGATCCTGTGGGCGCGGGCTGGCCCGCC‑AATCCTTTGGTGGATGCACCGCCGCATGCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCaa < 2:1699375/150‑1 (MQ=255) gggTCTTCACGGGCCTGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCACGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AAGACGATGGTGGTTTCACCGCCGCATGCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCaa < 2:5551022/149‑1 (MQ=38) ttCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGCTTCACCGCCGCATTCGCGGGCAAGCCCGCGCCCCCAGTGTTCGGCGCCAGCCAc > 2:4622048/1‑150 (MQ=255) ttCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATACTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:3054645/115‑1 (MQ=18) aCTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTTCCCCCC‑AAAACGCAGGTGGAGTACCCCCCGCCATCGCCGGCCAGCCCGCGCCCCCACGGTTGGGCGCAAGCCCCggg > 2:4366481/1‑150 (MQ=255) cTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGTCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGa < 2:3285744/150‑1 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGGTGCCCCCGCAATACG‑GGGTTGGTTGACCCCCCCAATAGCGGGCCAAGCCGCGCCCCCACGGTTGGGCGCAAGcccccgggt > 2:1217694/1‑143 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTGCCCCCG‑AAAACGAAGGTTGTTTCACCGCCCCAATAGCGGGCAAGCCCCCGCCCCCCGGGTTGGGCGCCAGCCCCggggg > 2:4430220/1‑148 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCGTGCCCCCG‑AAAAACATTGTGGGTTAACCGCCGCCATAGCGGGCCACCCCCCCCCCCCCCGGTTGGGCGCCACCCACggggt > 2:4430223/1‑148 (MQ=255) gtcATGCGCCCCTTCCGCCACTAATGACGCGGATCCGGCGGCAAGTGTAGATCGTGTGGGAGGGGGGTTGCCCGCG‑AATACGTTGGTGGATTCACCGCCGCATTCGGGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATc < 2:3617981/148‑1 (MQ=255) cttGCGCCACTACCGCCACTACTTACGCGGAGCCCGCGGCAAGGGGAGACCGTGGGGGCGCGGGCTTGCCCGCC‑AATAGGTGGGTGTATTCCCCGCCGCATTGGCGGCAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCAc < 2:18987/148‑1 (MQ=255) ccggcgcCACTGCCGCCACTATTTCGGGGTAGCCGGTGGCATGGGTTGTTCGTGGGGGCGGGGGCGTGCCCGCT‑ATTCCTTGGGTGGATCCCCGGCCGCTGCCGGGGCCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCAc < 2:18867/147‑1 (MQ=255) caggcgcCCCTCCCCCCACTATTTCCGCGCCCCCGGCGGCACGTCGTGAGCGGGGGGGGGGGGGCGTCCCGGCG‑AATCGGTTGGTGTATCCACCGCCGATTTCGCGGCCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCAc < 2:18990/147‑1 (MQ=255) ccACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:4620336/150‑1 (MQ=255) aCTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGAGTGTGGTTTCACCCCCGCATTAGCGGGCAAGCCCGCTGCCACACGGTTCGGCGCAAGCCACGGGATCACTTGGATCGAGGgttata > 2:3681970/1‑147 (MQ=38) aCGGGGTTCCCGTGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCT‑AATACGATGGTGTATTCACCGCCGCATTCGGGGGAATGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 2:5418466/150‑1 (MQ=38) ggATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGTTTCACCGCCGCTTTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGttt < 2:2332293/150‑1 (MQ=255) gATCCCGCGGCAAGTCGAGATCCTGGGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGTATTCACCGCCGCTTTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:453361/150‑1 (MQ=39) gaggTCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGTTGGTGGATTCACCGCCGCATTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGt < 2:1278138/150‑1 (MQ=255) gagaCCCGGTGGGAGCGGCCTTGCCCGCG‑AATCCGATGGTGTATACCCCGCCGCATCCGCGGGCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGt < 1:3275924/150‑1 (MQ=255) tCCTGTGGGAGCGGGCTTGCCCGAT‑AATACGTTGGTGGATTCACCGCCCCATGCGCGGGCAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 1:3635664/150‑1 (MQ=255) tCCTGTGGGAGCGGACTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 1:5472814/150‑1 (MQ=255) tCCTGTGGGAGCGGACTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 1:5472725/150‑1 (MQ=255) gtgGGCGGGGGCTGGCCCGCC‑AATACTTGGGTGTTTCCACCGCCGCTTTGGCGGGAACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:1283598/150‑1 (MQ=255) gCTTGCCGGCT‑AATACGATGGTGTATCCCCCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg < 2:2855915/150‑1 (MQ=255) gCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 1:3223810/1‑150 (MQ=255) gCTGGCCCGCC‑AATACGTTGGTGGATTCACCGCCGCATTCGGGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg < 1:2778178/150‑1 (MQ=255) ctggCCCGCG‑AATACGATGGTGGATTCCCCGCCGCCTGCGGGGGCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctgg < 2:1999811/147‑1 (MQ=255) cTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctgg > 1:4161012/1‑150 (MQ=25) cTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctgg > 1:4160949/1‑150 (MQ=25) ttGCCCGCG‑ATTAGGTTGGTGTTTTCACCGCGGCTTGCGGGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc < 2:2520102/150‑1 (MQ=255) ttGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 2:3197217/1‑150 (MQ=255) ttGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 1:2495329/1‑150 (MQ=255) gCCTGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 1:4855805/150‑1 (MQ=25) cccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 2:1826825/1‑150 (MQ=255) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACGTGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4770857/1‑150 (MQ=25) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:476039/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4771478/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4238273/1‑150 (MQ=37) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGAc < 2:4580628/99‑1 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGAc > 1:4580628/1‑99 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa > 2:3412980/1‑112 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 1:3412980/112‑1 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:4010579/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:2431781/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCAGTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3862261/1‑150 (MQ=255) ccGCG‑AAGGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCCCGGGACTCGAGGGGGTGACAGGAACGGTGTGATCATCGGCAGCGGTGGCCGGGAGCACGCccgggcctgg > 2:2448158/1‑150 (MQ=12) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:3048016/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:1525425/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:2355726/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:810413/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:575704/1‑150 (MQ=37) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:4476265/1‑150 (MQ=37) cgcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:2506772/1‑150 (MQ=255) gcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4183493/1‑150 (MQ=37) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:1779980/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:2240138/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:5387626/1‑150 (MQ=255) ctACGAGGGTGGATCCCCCGCCGCTTCCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAAGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc < 1:1332142/149‑1 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc > 2:473748/1‑150 (MQ=255) aTACGAGGGTGGTTTCCCCGCCCCATGCGGGGGCAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc < 2:2929998/150‑1 (MQ=255) cgtgggtgtATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGcc < 2:1078291/146‑1 (MQ=255) tggtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAg > 1:1191996/1‑150 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGa > 2:1717150/1‑150 (MQ=255) ggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAcc < 2:2552483/150‑1 (MQ=255) gATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAccc > 2:2111585/1‑150 (MQ=255) ttCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAc > 2:4097903/1‑150 (MQ=255) ttCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAc > 1:3605561/1‑150 (MQ=255) tCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcg > 2:651425/1‑150 (MQ=255) aCCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgcg > 1:5042211/1‑150 (MQ=255) aCCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgcg > 1:3031606/1‑150 (MQ=255) aCCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgcg > 1:2841350/1‑150 (MQ=255) cgccgcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 2:4810413/1‑150 (MQ=255) cgccgcATTCGCGGGCAAGCCCGCTCCCACAATGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 2:4846129/1‑150 (MQ=255) cgccgaTTTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc < 1:4089324/150‑1 (MQ=255) ccccgcATCCGGGGCCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc < 1:1240594/148‑1 (MQ=255) ccgcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCga > 2:1426691/1‑150 (MQ=255) | TGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGA > NC_002947/5490019‑5490314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |