| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,506,404 | T→A | 5.5% | intergenic (+18/‑201) | PP_4834 → / → PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,506,404 | 0 | T | A | 5.5% | 679.3 / 18.6 | 201 | intergenic (+18/‑201) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (75/115); new base A (8/3); total (83/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.40e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 207 total aligned reads displayed.
TGTACCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTT > NC_002947/5506256‑5506551 | tGTACCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTg < 1:1842647/150‑1 (MQ=255)tGTACCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTg < 1:1842495/150‑1 (MQ=255) gTACCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTgc < 1:3429328/150‑1 (MQ=255) aCCTATTGTGAGAAAGCTATGTGGGCGCGATTTAGAACCTCTCGGGGAGCAGCAATGCCAAGGTGGTGCTTATGCAGGCTGACCTGCAAGAGACCGTTCGCGGGTTTATGGGCCGCAACATGATTTGAGAGTGTCGGGGGCGCTATgagc > 2:5087299/1‑150 (MQ=255) aCCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTgcgc < 2:2757018/150‑1 (MQ=255) aCCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTgcgc < 2:1242167/150‑1 (MQ=255) aCCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTgcgc < 1:2976743/150‑1 (MQ=255) aCCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTgcgc > 1:4383772/1‑150 (MQ=255) aCCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTgcgc < 1:1510642/150‑1 (MQ=255) aCCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTtcgc > 1:4137580/1‑150 (MQ=255) cTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGccc < 1:1118892/150‑1 (MQ=255) tATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGcccc > 2:5530439/1‑150 (MQ=255) tGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCAGGGGCGCTTTGCGCCCCtga < 2:3054059/150‑3 (MQ=255) gCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTTCGCCCCAATcgc > 2:1237281/1‑150 (MQ=255) gCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATcgc > 1:2133570/1‑150 (MQ=255) gAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGa < 1:3104325/150‑1 (MQ=255) gAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGa < 1:5503416/150‑1 (MQ=255) cgatctgtgGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGacac < 1:4969856/145‑1 (MQ=255) cGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGGGCGTTGGGCCCCGATcgcggccc > 1:241839/1‑146 (MQ=255) cGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGacac < 1:1353711/150‑1 (MQ=255) cTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCATGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACaa < 1:3703640/150‑1 (MQ=255) tATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAAACGCGACACAAg > 1:4125992/1‑150 (MQ=255) tATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATCGCGACACAAg > 2:1376203/1‑150 (MQ=255) tgGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGccc < 2:2454889/150‑1 (MQ=255) ggCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTAAAGCGACACAAGGCCCca > 1:464055/1‑150 (MQ=255) gcgcGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCcac < 2:3578214/150‑1 (MQ=255) gcgATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAg < 1:1580914/150‑1 (MQ=255) gATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGa < 1:5314500/150‑1 (MQ=255) ggAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAg > 2:1717974/1‑150 (MQ=255) aaCCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCa < 2:1253721/150‑1 (MQ=255) aCCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTGGCCCCAATCGCGACACAACGCCCCCCACGACAGCGCAg > 1:814702/1‑150 (MQ=255) ggggAGCAGCAATGCCACGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 1:2013635/150‑1 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 2:740259/150‑1 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 2:1548090/150‑1 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 1:3273791/150‑1 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 1:2227710/150‑1 (MQ=255) agcagcAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCt < 1:1268970/150‑1 (MQ=255) ccAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGACACAAGGCCCCACCGGACAGCGCAGTATTCGAGGCGGCCCCAATTc > 1:4685975/1‑150 (MQ=255) cAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTTCGCCCCAATCGCGACACAACGCCCCACAGGACCGCGCCGGATTCGAGGCGGCCGCAAATCt > 1:4530775/1‑150 (MQ=255) aaGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa > 2:4678037/1‑134 (MQ=255) aaGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtg < 2:4901547/150‑1 (MQ=255) aGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGAGCGTGCGCGGGTTGATGGGCCGCACCAAGATGTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGCCAGCGCAGTATTCGAGGCTGCCGGAATTCtgt < 2:3961073/150‑1 (MQ=39) aGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtgt < 1:3571950/150‑1 (MQ=255) aGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtgt < 1:4288755/150‑1 (MQ=255) aGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtgt < 2:1832844/150‑1 (MQ=255) aGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtgt < 2:4667909/150‑1 (MQ=255) ggtggtggtGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtgtg < 2:4208891/150‑1 (MQ=255) gtggtggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTgg < 2:170154/150‑1 (MQ=255) ggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCCCCGTATTCGAGGCTGCCGCAATTCTGTGGGAGCg > 2:2676219/1‑150 (MQ=255) ttGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGGGTTGCGCCCCCAACGCGCCCCAAGGCCCCCCACGACAGCGCCCGAGTCGAGGCGGCCCCCAATCTGTGGGGGCGGccg > 1:2612442/1‑149 (MQ=255) ttGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCAATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTAGAGGCTGCCGCAATTCTGTGGGAGCGGCCt > 1:4589816/1‑150 (MQ=255) ttGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATAGCGACACAACGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGCGCGGccg > 2:5300559/1‑149 (MQ=255) tGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCtt < 1:3220324/150‑1 (MQ=255) tGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCtt < 2:3749970/150‑1 (MQ=255) ccGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGACACAATGCCCCAAAGGACACCGCAGGATTAGAGGCTGCCGCAATTCTGTTGGAGCGGCCTtgt > 2:2607226/1‑150 (MQ=255) ccGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTAACGCGGCACCAGGCCCCCCAGGCCAGCGCAGGATTCGAGGCGGCCGCCAGTCTGTGGGAGCGGCCGtgg > 2:5440359/1‑149 (MQ=255) ggCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTgtgt > 1:3813986/1‑150 (MQ=255) tGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTcgc < 1:2628932/150‑1 (MQ=255) tGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCCCGACACAAGGCCCCACACGACAGCGCAGGATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCGTGTGTcgc > 2:3641435/1‑150 (MQ=255) tGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCGAACGCGGCACAAAGCCCCACAGGACAGCCCCGTATTAGAGGCTGCCGCAAATCTGTGGGCGCGGCCGTGTGTcgc > 1:1833371/1‑150 (MQ=255) ccTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTTCGCCCCAAACGCCACACAAGGCCCCACACGACAGCGCACTATTCGCGGCTGCCCCAAATCTGTGGGAGCGGCCGTGTGTCGCGAt > 2:1904730/1‑150 (MQ=255) cTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTATATCGCAACAAGGCCCCACCCGACACAGCCTGATTCGAGGCTTACGCAAATATTTTGGAGCGGCCTATTTTCGCGATg > 2:2200644/1‑150 (MQ=255) cTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATAGCGACACAAGGCCCCACACGACAGCGCACTATTAGAGGCGGCCGCAAATCTGTGGGAGCGGCCGTTTGTCGCGaat > 1:4142802/1‑148 (MQ=255) cTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCATTTCGCCCCTATAGCGACACAAGGCCCCACAGGACATCGCATTATTAGCGGCTTCCGCAATTCTGTGGGAGCGGCCTTGTGTAGCGATg > 2:140942/1‑150 (MQ=255) tGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGACACCAGGCCCCACAGGGCAGCGCAGTATTCGAGGCTGCCGCAATTATGTGGGCGCGGCCGTGTGGCGCGATgg > 2:3338787/1‑150 (MQ=255) cAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCtt > 2:4616931/1‑136 (MQ=255) aaGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCt < 2:2893184/150‑1 (MQ=255) aaGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTTTTCGAGGCTGCCGCAAATCTGTGGGAGCGGCCGTGTGGCGCGATGGGCt > 2:5623369/1‑150 (MQ=39) gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGACACAAGGCCCCACAGGACAGCGCAGGATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCGTGTGTCGCGATGGGCTGc > 2:3254630/1‑150 (MQ=255) agaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGca < 1:3324595/150‑1 (MQ=255) gaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGTCACAAGGCCCCACAGGACAGCGCAGTATTAGAGGCTGGCGCAAATCTGTGGGGGCGGCCGTGTTTCGCGGTTGGCTTcac > 2:1304966/1‑150 (MQ=255) aCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGcaca < 2:1076359/150‑1 (MQ=255) ccGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGTGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcag < 1:3002149/150‑1 (MQ=255) gggcgcGGGTTGATGGGCCGCAACACGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACACGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcagca < 1:169525/148‑1 (MQ=255) gTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcagca < 2:2381437/150‑1 (MQ=255) gcgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGccc < 2:2072745/150‑1 (MQ=255) cgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGcccc < 2:341227/150‑1 (MQ=255) cgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGcccc < 2:1544463/150‑1 (MQ=255) ggTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCa < 1:1703858/150‑1 (MQ=255) tGGGCCGCAACATGATTGGAGAGGGGCGGGGGCGCTTTGCGCCCCTATCGCGACACACGGCCCCTCAGGACAGCGCAGTATTCGTGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa < 1:2353067/150‑1 (MQ=38) tGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa < 2:4312283/150‑1 (MQ=255) tGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCGAACGCGCCCCAAGGCCCCACAGGACAGCCCAGGATTCGAGGCTGCCGCAAATCAGTGGGAGCGGCCGTGTGTCGCGAAGGGCTGCACCGCAGCCCCCCATAccc > 2:3550992/1‑149 (MQ=255) tGGGCCGCAACAAGATTTGAGAGTGGCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa < 1:4376679/150‑1 (MQ=255) ccGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCCCAAATATGTGGGAGCGGCCGTGTGTCGCGATGGGCTGCACAGCAGCCCCCAAAACCAGacc > 2:2272963/1‑150 (MQ=39) aacaaGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCt < 1:3926186/150‑1 (MQ=255) acaaGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATAGCGACACAACGCCCCACAGGAAAGCGCAGTATTAGAGGCAGCCGCAAATCATTGGGAGCGGCCATGTGTCGCGATGGGCAGCAAACCAGCCCCCAATACCAAaccaccag > 1:5619460/1‑148 (MQ=255) aaGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCAATCGCGACACAAGGCCCCCCACGACAGCGCAGTATTAGAGGCTGCCGCCATTCTGTTGGAGCGGCCGTGTGTGGCGATGGGCTGCACAGCAGCCCCCAATAACAGAACACCAGCg > 1:3750224/1‑150 (MQ=255) gtgtCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGGCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCg < 2:199641/150‑1 (MQ=255) gataggggCGCAAAGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCa > 1:1790268/5‑150 (MQ=255) gataggggCGCAAAGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCa > 1:2868701/5‑150 (MQ=255) ataggggCGCAAAGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAc > 2:3557075/4‑150 (MQ=255) ataggggCGCAAAGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAc > 2:101423/4‑150 (MQ=255) taggggCGCAAAGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAcc > 2:312040/3‑150 (MQ=255) gggggCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAccc > 1:2734672/1‑150 (MQ=255) ggCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCgg < 1:2772477/150‑1 (MQ=255) gcgcTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGCCCTTGTGGCCCGATGGGCGGCAAACCAGCCCCCATTACCAGACAACATCCGTCAATAAACCCAACCCCgca > 1:1023413/1‑148 (MQ=255) gcTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAt < 1:5530439/150‑1 (MQ=255) gcTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCACAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAt < 1:1717974/150‑1 (MQ=255) cTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAtt > 1:2686527/1‑150 (MQ=255) tttGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAGTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAttt > 2:4649583/1‑150 (MQ=255) | TGTACCTATTGGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTT > NC_002947/5506256‑5506551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |