| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,514,902 | T→G | 8.7% | L35R (CTG→CGG) | urtB → | urea ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,514,902 | 0 | T | G | 8.7% | 734.2 / 2.4 | 297 | L35R (CTG→CGG) | urtB | urea ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (118/134); new base G (30/5); total (155/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.43e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 298 total aligned reads displayed.
GGGCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCAC > NC_002947/5514753‑5515050 | gCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCCAG‑CCTTCGAGCAGGCCGGCCTGCt < 1:1349591/150‑1 (MQ=255) gCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGc < 2:4983766/150‑1 (MQ=255) cTCACCCGCGAAGAATCCAACACCGATGTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCt < 2:306279/150‑1 (MQ=255) tCACGCGCGAAGAATCCAACACCGATTTCCTGGTTTGCCCGCATGCTCAGACTCCTGCTCAGCCTCCTGCTGCTAATCCCCCTGGCAACCCTCGCCAGCGATGGCGAATTCTTTCTCTCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc < 2:5069364/150‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc < 2:1929429/150‑1 (MQ=255) ccGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAg < 1:3613703/150‑1 (MQ=255) ccGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAg > 1:5567342/1‑150 (MQ=255) ccGCGAAGAATCCAACACCGAGTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAg < 1:4429448/150‑1 (MQ=255) cgcgAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAgg > 2:4886301/1‑150 (MQ=255) aaTCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCGCGAAGGCGG‑Ggca > 1:3601904/1‑150 (MQ=255) tCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGCCTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑Ggcagc < 2:2393259/150‑1 (MQ=255) tCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTCATCCCCCTGGCAACCCACGCCCGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCACCGAGCAGGCCGGCCTGCTCGAAGGCGG‑Ggccgc > 2:3013830/1‑150 (MQ=255) tCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑Ggcagc < 2:1278275/150‑1 (MQ=255) cAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCTCGAAGGCTG‑Ggcagccc > 1:1722581/1‑148 (MQ=255) aaCACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGTAGGCCGGCCTGCTCGAAGGCTG‑GGCAGcaca > 1:3906108/1‑150 (MQ=255) acCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAcc > 1:2835914/1‑150 (MQ=255) acCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAcc > 2:4681689/1‑150 (MQ=255) ccGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAccc > 2:273855/1‑150 (MQ=255) gttttCCTGGAGTGCCCGCATGCTCTGACTCCTGCTCACCCTCCTGCTGATAAGCCCCCTGGCAACCCACGCCAGCGTGGGCTATTTCTTTCTCCCCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGa < 1:3301255/148‑1 (MQ=255) aTTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGAt < 2:3115914/150‑1 (MQ=255) ttCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGc > 2:3785939/1‑150 (MQ=255) ttCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCTG‑GGCAGCACAACCCGATGc > 2:232779/1‑150 (MQ=255) ccGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCAG‑GGCAGCACAACCCCATGCCGCGCGCCTGcc > 1:2734822/1‑150 (MQ=255) cGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCAG‑GGCAGCACAACCCCAAGCCGCCCgccggccg > 1:1642592/1‑150 (MQ=255) gCATGCTCAGACCCCTGCTCACCCCCCTGCTGCTAACCCCCCTCGCACCCCACGCCAGCGAGGGCTAATTCTTACTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCgc < 1:381817/150‑1 (MQ=255) aTGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCCAAGCCGCGCGCCGGCCgctg > 1:906559/1‑150 (MQ=255) gCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCCGCCGGCTCGGAGGCAG‑GGCCGCACAACCACAAGCCGCCCCCCAGCCgcggca > 1:2539280/1‑149 (MQ=255) aGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGACCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGaa > 1:3646848/1‑150 (MQ=255) tCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCGGCACGAAGGCTG‑GGCCGCCCAACCCCAAGCCGCGCGCCGGCCGCTCCAGGAAAAcc > 1:3148588/1‑150 (MQ=255) tCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAAcc > 2:5544476/1‑150 (MQ=255) tCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCAGCCGCGGCTGGAAAAcc > 1:1850194/1‑150 (MQ=255) tGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCGGCGCGAAGGCTG‑GGCCGCACAACCCCAAGCCGCGCGCCAGCCGCTGCTGGaaaaacagc > 1:938364/1‑145 (MQ=255) tGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCGGCCGCAGCTGGgaaaacagc > 1:1126442/1‑145 (MQ=255) aCCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCTCGAAGGCTG‑GGCAGCACAACCCCAAGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCaa > 1:4892605/1‑150 (MQ=255) ctcctGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCGG‑GGCAGCACAACCCCAAGCCCCCCGCCGGCCGCTGCTGGAAAACCAGCGCCAAGGc > 1:788489/1‑150 (MQ=255) tgctgcTAATCCCCCTGGAAACCCACGCCAGAGAGGGCGAATTCTTTCTCACAGACAAGCCCGCCGAGCAGGACGGCCTGCTCGAAGGCTG‑GGCAGCACAACCAGATGACGCGCGCCTGCCGCTGCTGGGAAACCTGCGCCCAGGCCGCa > 2:4442508/1‑150 (MQ=255) gctgctAATCCCCCTGGCAACCCACGCCAGCGCGGGCGAATTCTGTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCag > 2:1971945/1‑149 (MQ=255) ctgctAACCCCCCTGGCAACCCCCCCCAGCGTGGGCGAAATCTTCCTCCCCGCCACGCCCGCCGCGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATc < 1:2215881/150‑1 (MQ=255) gctAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGc < 2:3946119/150‑1 (MQ=255) aaTCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccac > 2:4714841/1‑150 (MQ=255) aaTCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccac > 2:3875359/1‑150 (MQ=255) tCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccacca > 2:5372176/1‑150 (MQ=255) ccccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAAt > 2:4824202/1‑150 (MQ=255) ccTGGCAACCCACGCGTGCGTGGGCGTATTCTTTCTCACCGCCAAGCCCGCCGAGCTGGCCGGCGTGCTCGAAGGCTG‑GGCAGCACTACCCGCTGCCGCGCGCCTGCCGCTGCTGGTAAACCTGCGCCAAGGCCGCATCGCCACCAATgt < 2:2957758/150‑2 (MQ=255) ccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAGGCGG‑GGCCGCACCACCCCATGCCGCGCCCCGGCCGCGGCGGGGCAACCTGCGCCCAGGCCGCATCGcccccccgga > 1:4795951/1‑145 (MQ=255) ggCAACCCCCGCCTGCGTGGGCTAATTCTTTCTCACCGCCACGCCCGCCGAGCTGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACaa < 1:4260616/150‑1 (MQ=255) ccacccccCGCCAGCGCGGGCGAATTCTTACTCCCCGCCACGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAg < 1:5274305/146‑1 (MQ=255) cAACCCACGCCCGCGAGGGCTATTTCTTTCTCACCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAgc < 1:4721893/150‑1 (MQ=255) cAACCCACGCCAGCGAGGTCTAATTCTTTCACCCCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAgc < 1:4442111/150‑1 (MQ=255) cAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAgc < 2:4098714/150‑1 (MQ=255) aaCCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAgcg > 2:3276731/1‑150 (MQ=255) aaCCCACGCCAGCGAGGGCGAAGTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCACGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCAGCGCCAAGGCCGCATCGCCACCAATGACAAgcg > 2:460363/1‑150 (MQ=255) ccACGCCTGCGTGGGCGAATTCTTTCACACCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCaa < 1:3375629/150‑1 (MQ=255) ccACGCCAGCGTGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCaa < 2:6030/150‑1 (MQ=255) ccACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCCAAGCCCCGCGCCTGCCGCAGCAGGAAAAACAGCGCCCAGGCCGCATCGCCACCAAAGACAAGCCCaa > 1:4467586/1‑150 (MQ=255) aCGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAgg > 2:3125852/1‑150 (MQ=255) ccAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCCGCACAAACCGAAGCCGCGCGCCAGCCGCAGCTGGAAAACCAGCGCCCAGGCCCCATCGCCACCAATGACAAgcgccacgggc > 1:1280315/1‑143 (MQ=255) aGCGAGGGCGATTTCTTTCTCCCCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTgcgc < 1:1017472/150‑1 (MQ=255) gtgggCGAATTCTTTCTCCCCGCCCAGCCCGCCGCGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACACGCGCAAGGTGCGCCTg < 1:3366835/148‑1 (MQ=255) gAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCAG‑GGCAGCACAACCCCATGCCGCGCGCCGGCCGCTGCTGGAAAACCTGCGCCAAGCCCGCATCCCCACCAATGACAAACGCAAGGTGCGccag > 1:191992/1‑148 (MQ=255) gggCTAATTCTTTCTCACCGCCACGCCCGCCGAGCTGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaa < 1:1491587/150‑1 (MQ=255) gCGAATTCTTTCTCACAGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAACCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaaca > 2:2786955/1‑150 (MQ=255) ctaaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCGGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaacaa < 1:5416842/148‑1 (MQ=255) gAATTCTTTCTCAGCGCCAAGCCCGCCGAGCAGGCCCGCCGGCTCGAAGGCTG‑GGCAGCACAACCCCAAGCCGCCCGCCAGCCCCAGCGGGAAAAACAGCGCCAAGGCCCCAACGCCACCAAAGAACACCGCAAGGGGCGCCGGaacaac > 1:2455898/1‑150 (MQ=255) aaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAAcc < 2:1496849/150‑1 (MQ=255) aaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAAcc < 2:3374969/150‑1 (MQ=255) aaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAAcc < 2:5298059/150‑1 (MQ=255) aTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCg > 2:1545294/1‑150 (MQ=255) ttctttctCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGc < 1:422891/150‑1 (MQ=255) tctttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGcc > 2:4224601/1‑150 (MQ=255) ttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCCCATCGCCACCCATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTgc > 2:2588745/1‑150 (MQ=255) ctcACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAAACGCCTgcgc > 2:1683015/1‑150 (MQ=255) tcACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGcgcg > 2:1376721/1‑150 (MQ=255) tcACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAAAGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGcgcg > 1:708304/1‑150 (MQ=255) accccGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGcgcg < 1:2951303/147‑1 (MQ=255) cACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCgg < 2:2046274/150‑1 (MQ=255) cACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCCATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCgg > 1:5541078/1‑150 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTTCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAATCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc > 2:2166088/1‑150 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc > 2:4670366/1‑150 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCAGCCGCTGCTGGAAAACCAGCGCCAAGGCCGCATCGCCACCAAAGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc > 1:4564426/1‑150 (MQ=255) aCCCCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc < 1:968634/150‑1 (MQ=255) ccAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACCACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCACTGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGa < 2:3669342/150‑1 (MQ=255) ccAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGa < 2:792576/150‑1 (MQ=255) ccAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGa < 2:839505/150‑1 (MQ=255) cccGCCGAGCAGGCCGGCCAGCTCGAAGGCTG‑GGCAGCACAACACCATGCCCCGCGCCAGCCGCTGCAGGAAAAACAGCGCCAAGGCCGCAACGCCACCAAACACAAAACCAAGGTGCGCCAGAAAAACCCCCAGCGCGGCCAGATCGAc > 1:1069831/1‑150 (MQ=255) ccgccgAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACa < 2:2212588/150‑1 (MQ=255) cgccgAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACaa < 2:2468564/150‑1 (MQ=255) ccgAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACg < 2:3569654/150‑1 (MQ=255) gAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGcc < 2:3762864/150‑1 (MQ=255) gCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCt > 2:4234678/1‑150 (MQ=255) ggccggccTGCTCGATGGCTG‑GTCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGGCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTggg < 2:761251/150‑2 (MQ=255) ggccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgc < 1:3549110/150‑1 (MQ=255) ggccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAAGGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgc < 1:5064639/150‑1 (MQ=255) gccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcc > 1:4054921/1‑150 (MQ=255) gccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcc < 2:728468/150‑1 (MQ=255) ccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcca < 2:3752807/150‑1 (MQ=255) ccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCGGgcca < 2:1855300/150‑1 (MQ=255) cggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgccag > 1:3739250/1‑150 (MQ=255) aaaccTGCGCCAAGGCCGCGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcca < 1:3014887/147‑1 (MQ=255) ggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgccagc < 2:5567342/150‑1 (MQ=255) | GGGCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCAC > NC_002947/5514753‑5515050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |