| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,514,905 | T→G | 5.2% | L36R (CTC→CGC) | urtB → | urea ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,514,905 | 0 | T | G | 5.2% | 806.1 / 3.5 | 292 | L36R (CTC→CGC) | urtB | urea ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (132/133); new base G (19/4); total (153/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.75e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 303 total aligned reads displayed.
GCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCACCAGT > NC_002947/5514755‑5515054 | cTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCt < 2:5216114/150‑1 (MQ=255) cTCACCCGCGAAGAATCCAACACCGATGTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCt < 2:306279/150‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc < 1:4489957/150‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc < 2:259539/150‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc < 2:1929459/150‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc < 1:1653549/150‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTc > 1:950918/1‑150 (MQ=255) ccGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAg < 1:3613703/150‑1 (MQ=255) ccGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAg > 1:5567342/1‑150 (MQ=255) ccGCGAAGAATCCAACACCGAGTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAg < 1:4429448/150‑1 (MQ=255) cgcgAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAgg > 2:4886301/1‑150 (MQ=255) gcgAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCGCGAAGGc > 1:908063/1‑150 (MQ=255) aataaTCCAACACCGATTTCCAGTATTGCCCGAATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGAAACCCACGCCAGCGAGGGCGAATTCTTTCTAACCGCAAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTg‑g < 2:713316/147‑1 (MQ=255) ataaTCCAACACCTATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCTAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTg‑gg < 2:758389/148‑1 (MQ=255) agaaTCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTg‑gg < 2:3658260/150‑1 (MQ=255) aaTCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCGCGAAGGCGG‑Ggca > 1:3601904/1‑150 (MQ=255) tCCAACCCCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑Ggcagc < 2:835560/150‑1 (MQ=255) tCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTCATCCCCCTGGCAACCCACGCCCGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCACCGAGCAGGCCGGCCTGCTCGAAGGCGG‑Ggccgc > 2:3013830/1‑150 (MQ=255) tCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑Ggcagc < 2:1278275/150‑1 (MQ=255) aaCACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGTAGGCCGGCCTGCTCGAAGGCTG‑GGCAGcaca > 1:3906108/1‑150 (MQ=255) acCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAcc > 1:2835914/1‑150 (MQ=255) acCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAcc > 2:502657/1‑150 (MQ=255) acCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAAcc > 2:4681689/1‑150 (MQ=255) gttttCCTGGAGTGCCCGCATGCTCTGACTCCTGCTCACCCTCCTGCTGATAAGCCCCCTGGCAACCCACGCCAGCGTGGGCTATTTCTTTCTCCCCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGa < 1:3301255/148‑1 (MQ=255) aTTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGAt < 2:3115914/150‑1 (MQ=255) ttCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGc > 2:3785926/1‑150 (MQ=255) tGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCt < 2:555533/150‑1 (MQ=255) ccGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCAG‑GGCAGCACAACCCCATGCCGCGCGCCTGcc > 1:2734822/1‑150 (MQ=255) gCATGCTCAGACCCCTGCTCACCCCCCTGCTGCTAACCCCCCTCGCACCCCACGCCAGCGAGGGCTAATTCTTACTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCgc < 1:381817/150‑1 (MQ=255) gCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCCGCCGGCTCGGAGGCAG‑GGCCGCACAACCACAAGCCGCCCCCCAGCCgcggca > 1:2539280/1‑149 (MQ=255) tCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTgg > 2:1019472/1‑150 (MQ=255) aGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGACCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGaa > 1:3646848/1‑150 (MQ=255) caCTCCTGCTCACCCTCCTGCTGCTAATCCCCCGGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGaaa < 2:2752721/149‑1 (MQ=255) tCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCGGCACGAAGGCTG‑GGCCGCCCAACCCCAAGCCGCGCGCCGGCCGCTCCAGGAAAAcc > 1:3148588/1‑150 (MQ=255) cTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCGCGCAGGCTG‑GGCGGCACAAACCCCAGCCGCCCGCCGGCCGCGGCGGGAAAAACTg > 1:1087538/1‑150 (MQ=255) gCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTgcg > 1:4669694/1‑150 (MQ=255) cTCACCCTCCATCTGCTAAACCCCCTGCCACCCCACCCCCGCGAGGGCGAATTCTTCCACCCCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTgcgc < 1:757008/150‑1 (MQ=255) aCCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCTCGAAGGCTG‑GGCAGCACAACCCCAAGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCaa > 1:4892605/1‑150 (MQ=255) tgctgcTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCCGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCa > 2:4442515/1‑150 (MQ=255) gctAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGc > 2:333924/1‑150 (MQ=255) gctAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGc < 2:3946119/150‑1 (MQ=255) aaTCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCCAGGCCGCATCGccac > 2:3875254/1‑150 (MQ=255) aaTCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccac < 2:2214365/150‑1 (MQ=255) aaTCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccac > 2:4714841/1‑150 (MQ=255) aaTCCCCCTCGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccac < 2:207788/150‑1 (MQ=255) aaTCCCCCGGGCACCCCCCGCCCGCGTGGGCGAATTCTTTCCCCCCGCCACGCCCGCCGAGCAGGCGGGCCGGCGCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGccac < 1:870847/150‑1 (MQ=255) cccccTGCCACCCCCCGCCTGGGTGGGCTAATTCTTTCCCACCGCCACGCCCGCCGAGCCGGCCGGCCTGCACGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCaa < 1:3850322/150‑1 (MQ=255) ccccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAAt > 2:4824202/1‑150 (MQ=255) cccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCCGCCGGCGCGAACGCTT‑GGCAGCACAACCACAACCCCCGCGCCGGCCCCAGCTGCAGAACCACCCCCAACGCCGCAACCccacccacg > 1:1900614/1‑146 (MQ=255) ccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAGGCGG‑GGCCGCACCACCCCATGCCGCGCCCCGGCCGCGGCGGGGCAACCTGCGCCCAGGCCGCATCGcccccccgga > 1:4795951/1‑145 (MQ=255) ggCAACCCCCGCCTGCGTGGGCTAATTCTTTCTCACCGCCACGCCCGCCGAGCTGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACaa < 1:4260616/150‑1 (MQ=255) ccacccccCGCCAGCGCGGGCGAATTCTTACTCCCCGCCACGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAg < 1:5274305/146‑1 (MQ=255) cAACCCACGCCAGCGAGGTCTAATTCTTTCACCCCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAgc < 1:4442111/150‑1 (MQ=255) aaCCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAgcg > 2:4120988/1‑150 (MQ=255) aaCCCACGCCAGCGAGGGCGAAGTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCACGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCAGCGCCAAGGCCGCATCGCCACCAATGACAAgcg > 2:460363/1‑150 (MQ=255) ccACGCCTGCGTGGGCGAATTCTTTCACACCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCaa < 1:3375629/150‑1 (MQ=255) cACGCCTGGGTGGGCTAATTCTTTCTCACCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAg < 1:1816117/150‑1 (MQ=255) cACGCCAGCGTGGGCTAATTCTTTCTCACCGCCAAGCCCGCCGTGCTGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAg < 1:5051691/150‑1 (MQ=255) aCGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAgg > 2:3125852/1‑150 (MQ=255) cgCGTGGGCTATTTCTTTCTCCCCGCCCCGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTgcgc < 1:1535431/149‑1 (MQ=255) aGCGAGGGCGATTTCTTTCTCCCCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTgcgc < 1:1017472/150‑1 (MQ=255) aGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTgcgc < 2:5614330/150‑1 (MQ=255) aGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTgcgc > 2:5429074/1‑150 (MQ=255) gtgggCGAATTCTTTCTCCCCGCCCAGCCCGCCGCGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACACGCGCAAGGTGCGCCTg < 1:3366835/148‑1 (MQ=255) aGGGCTAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGa < 2:3758813/150‑1 (MQ=255) gggCGAATTCTTTCTCACCGCCAAGCCCGCCTAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaa < 2:2539280/150‑1 (MQ=255) ggCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaac > 2:369460/1‑150 (MQ=255) ctaaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCGGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaacaa < 1:5416842/148‑1 (MQ=255) cGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGCTGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGTCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaccac > 2:1992538/1‑149 (MQ=255) gAATTCTTTCTCAGCGCCAAGCCCGCCGAGCAGGCCCGCCGGCTCGAAGGCTG‑GGCAGCACAACCCCAAGCCGCCCGCCAGCCCCAGCGGGAAAAACAGCGCCAAGGCCCCAACGCCACCAAAGAACACCGCAAGGGGCGCCGGaacaac > 1:2455898/1‑150 (MQ=255) aaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAAcc < 2:1496849/150‑1 (MQ=255) ttctttctCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGc < 1:422891/150‑1 (MQ=255) tctttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGcc > 2:4224602/1‑150 (MQ=255) tttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTg > 2:1595121/1‑150 (MQ=255) ttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTgc > 2:2824738/1‑150 (MQ=255) tcACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGcgcg > 2:1376721/1‑150 (MQ=255) cACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCCGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCAGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCGGCGCgg > 1:1974280/1‑150 (MQ=255) cACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCCATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCgg > 1:5541078/1‑150 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc > 2:2169095/1‑150 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc < 2:5347562/150‑1 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc > 2:4670366/1‑150 (MQ=255) ccAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGa < 2:2373562/150‑1 (MQ=255) gCCCGCCGCGCAGGCCGGCCGGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGa < 2:4285034/150‑1 (MQ=255) cgccgAGCAGGCCGGCCTGCTCGAAGGCTA‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACaa < 2:2405685/150‑1 (MQ=255) ttcgAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAAc > 2:1692943/3‑150 (MQ=255) ccgAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACg > 2:1881338/1‑150 (MQ=255) ggccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgc < 1:3549110/150‑1 (MQ=255) ggccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgc < 2:7704/150‑1 (MQ=255) ggccggccCGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgc < 1:135227/150‑1 (MQ=255) gccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcc > 1:4054921/1‑150 (MQ=255) gccggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcc > 2:3557225/1‑150 (MQ=255) cggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgccag > 1:3739250/1‑150 (MQ=255) cggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgccag < 1:1302548/150‑1 (MQ=255) cggccTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgccag > 1:1208444/1‑150 (MQ=255) aaaccTGCGCCAAGGCCGCGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGgcca < 1:3014887/147‑1 (MQ=255) gCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCTCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGccacca < 2:2867168/150‑1 (MQ=255) cTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCACCAg < 1:2261044/150‑1 (MQ=255) tCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCACCAGt > 2:3231457/1‑150 (MQ=255) tCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCACCAGt > 1:2962297/1‑150 (MQ=255) tCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCACCAGt > 1:4587542/1‑150 (MQ=255) | GCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTG‑GGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTGGCCAGCCACCAGT > NC_002947/5514755‑5515054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |