| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,543,530 | T→A | 5.8% | intergenic (+23/+98) | PP_4871 → / ← PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,543,530 | 0 | T | A | 5.8% | 508.2 / 14.3 | 160 | intergenic (+23/+98) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (71/77); new base A (3/6); total (74/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
GGTTTCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTT > NC_002947/5543382‑5543678 | tttCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTcgc < 2:2403661/150‑1 (MQ=255) ttCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTcgcg < 1:2801560/150‑1 (MQ=255) ttCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTcgcg < 2:482681/150‑1 (MQ=255) ttCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTcgcg < 2:3202399/150‑1 (MQ=255) tCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCgg > 1:3649185/1‑150 (MQ=255) tCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCgg > 1:3649176/1‑150 (MQ=255) tGCGCCCGCAACACCGGGCGTTGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCGAAGCGGTcc < 1:947419/150‑1 (MQ=255) tGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTcc < 1:5568104/150‑1 (MQ=255) tGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTcc < 1:2746723/150‑1 (MQ=255) cccGCAACACCGGGCGTTGTTGGTGCTGGGGCAGCTGCCGGACGTGGTGCTGGAAGGGATGGACAGGTTTGTGGCGCGGGTCGCGCGTAAGTGGGTCTACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCGACGCGGTcccaaa < 1:2953762/150‑5 (MQ=255) cccGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTc < 1:5428092/150‑1 (MQ=255) ccGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCGAAGCGGTcccaaaa < 1:3227808/150‑6 (MQ=255) ccGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTAGGACCGCGAAGCGGTcccaaaa < 1:4734652/150‑6 (MQ=255) cGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTcgc > 1:1224968/1‑150 (MQ=255) cAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGa > 1:2111477/1‑150 (MQ=255) ccGGTCGTTGTTGGTGCTGGGGCAGCAGCCGGACGAGCTGCTGGATGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACGTGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACaa < 2:5358606/150‑1 (MQ=255) ccGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACaa < 2:4682920/150‑1 (MQ=255) cGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAg < 1:5177992/150‑1 (MQ=255) cGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAg < 2:4272036/150‑1 (MQ=255) ggCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGc < 2:1343751/150‑1 (MQ=255) gATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGc > 2:5274522/1‑150 (MQ=255) aTGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCt < 2:3842311/150‑1 (MQ=255) tGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTc < 1:1201917/150‑1 (MQ=255) gTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTcc < 1:1516859/150‑1 (MQ=255) ttGCCGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTccc > 1:4540750/1‑150 (MQ=255) gctgctGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCcac > 2:2757282/1‑150 (MQ=255) gctgctGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTATTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCcac > 2:5578157/1‑150 (MQ=255) gctgctGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTGTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCACCcac > 2:2763561/1‑150 (MQ=255) tgctgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACaa > 1:1313361/1‑150 (MQ=255) ctgGGGCAGCAGCCGGACGAGCTGCTAGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAg < 1:603693/150‑1 (MQ=255) tgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAgg < 1:2613027/150‑1 (MQ=255) gcagcaGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAAt < 1:5192017/150‑1 (MQ=255) cagcagCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATg < 2:2120941/150‑1 (MQ=255) cagcagCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCACTCCCACAAAGGCAATg < 2:3224758/150‑1 (MQ=255) agcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgg < 2:3654313/150‑1 (MQ=255) agcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCACTCCCACAAAGGCAATgg < 2:5367920/150‑1 (MQ=255) cagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgggg < 2:4387672/150‑1 (MQ=255) agcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATggggg > 2:2040837/1‑150 (MQ=255) gcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa > 1:2125211/1‑150 (MQ=255) cGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGc < 2:3370907/150‑1 (MQ=255) ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCg < 2:1585617/150‑1 (MQ=255) ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCg > 1:3003346/1‑150 (MQ=255) gACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCgg < 2:2731413/150‑1 (MQ=255) cGAGCTGCTGGAAGGGATGGACAGATTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGcc > 2:4779136/1‑150 (MQ=255) aGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt < 1:1011439/150‑1 (MQ=255) ctgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgt < 1:3255727/150‑1 (MQ=255) tgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTc > 2:367369/1‑95 (MQ=255) tgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTc < 1:367369/95‑1 (MQ=255) gATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGATggg > 2:3884939/1‑150 (MQ=255) aTGGACAGCTTAGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGACACTTTAGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGATGGGc > 1:5034406/1‑150 (MQ=255) tGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCt < 2:5064111/150‑1 (MQ=255) ggACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTg > 2:3328743/1‑150 (MQ=255) gACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTGCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGc < 1:5606384/150‑1 (MQ=255) gCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAAt > 2:5214586/1‑115 (MQ=255) gCTTGGTGGCGCCTGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAag < 2:1751649/150‑1 (MQ=255) cTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTcgcg < 1:472276/76‑1 (MQ=255) cTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTcgcg > 2:472276/1‑76 (MQ=255) cTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagc > 1:2049296/1‑150 (MQ=255) tttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAagca > 1:27754/1‑150 (MQ=255) gttGTGGCGCCGGTCGCGCCCAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGCCACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagca < 2:5239336/149‑1 (MQ=255) tgtgGCGCCGGTCGCGCCTAAGTGGGTCGGCAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAACGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagcagc < 1:390132/150‑1 (MQ=255) gTCGCGCCTAAGTGGGTCGACACGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTc < 2:727362/150‑1 (MQ=255) gTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTc > 2:4853785/1‑150 (MQ=255) gTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTc > 1:246930/1‑150 (MQ=255) tcccgcCTACGTGGGTCGACAAGCAGCCTGACTGAAGCTGTGAGTTTGGGGACGGCTGCGGGGCCCTTTCGCTCCCCAAGGCCGCCCCCAAACCGCCAAGGGGGGAGGGGCCTGGTGTCGCGATGGGCTGCAAAGCAGCCCCAAGAGTCg < 1:1498365/147‑1 (MQ=255) tCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCg < 2:2689117/150‑1 (MQ=255) cgcgCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGTCAAAAGGCCGCTACCACAAATGCAATGGGGGAGCGGGCTTTTGTAGCGATTGGCTGCAAAGAACCCCCAATattaga > 1:948156/1‑145 (MQ=255) gcgcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGAt > 1:5081313/1‑150 (MQ=255) gcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATcc > 2:1189265/1‑149 (MQ=255) gcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCa < 2:2228885/150‑1 (MQ=255) tAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGAGCAGtt > 1:1354773/1‑150 (MQ=255) acgggggTCGACAAGCACCCTCACTGAAGCTGAGACTTTGGGGACCGCGCCGCGGTCCTTTCGCGCCCCACGGCCGCTCCCACACAGGCAAGGGGGGAGCGGCCTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTa < 1:5410246/146‑1 (MQ=37) tCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAAGGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCACTAGTCGCTCAGTTAACGCGGa > 2:4378073/1‑150 (MQ=255) cGACACGCAGCCTTACTTAAGCTTAGACTTTGGGGACCGCTTCGCGGACCTTTCGCGACCCAAGGCCGCTCCAACAACGGAAATGGGGGATCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGaa < 1:1166945/150‑1 (MQ=37) gACAAGCAGCCTGACTGACGCTGAGACTTTGGGGACCGCTGCGCGGTCCTTCCGCGACACACGGCCGCCCCCACAAAGGAATGGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGGAt < 1:3433288/150‑1 (MQ=37) gACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAAt > 2:104981/1‑150 (MQ=255) aaGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCACTGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCCGCCCCCATAGTCGATCAGTTAACGCGGAATGAc > 1:4044189/1‑150 (MQ=255) aaGCAGCCTGACTGAAGCTGAGACTTTGGGGACCGCTTCGCGGACCTTTCGCGACACAAGGCCGCACCCACAAAGGCAAGGGGGGAGCGGCCTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGAc < 1:1013904/150‑1 (MQ=39) gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 2:3205691/150‑1 (MQ=255) gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 2:2432070/150‑1 (MQ=255) gcagcCTGACTGAAGCTGAGACTTGTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 2:4128759/150‑1 (MQ=255) ccTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTg > 1:5052844/1‑150 (MQ=255) ctgactgaCGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGa < 2:2402981/150‑1 (MQ=255) ctgactgaAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAAAAGTCGATCAGTTAACGCGGAATGACAGGCTGa > 1:3538692/1‑150 (MQ=255) ctgaAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGCGCGGCCTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGAcgcg < 1:5294449/150‑1 (MQ=255) gCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGcttc < 2:964130/150‑1 (MQ=255) tGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGATAACGCGGAATGACAGGCTGACGCGGcttctt > 2:4165411/1‑150 (MQ=255) tGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCAGCAAAGCAGCCCCAAAAGTCGATCAGTTAACCCCGAAAGACAGGCAGACGCGGcttctt > 1:3044358/1‑150 (MQ=39) tGAGACTTTTGGCACCGCTTCGCGGTCCTTGCGCGCCACACGGCCGCTCCCACAACGGCATTGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGcttctt < 1:3588385/150‑1 (MQ=38) tGAGACTGTTGGGACCGCGTCGCGGTCCTTTCGCGACACATGGCCGCTCACAAAAAGGCACTGGGGGCGCGGCCTGGTGTCGCGATGGGCTGCAAGGCCGCCCCACGAGTCGCTAAGTTCCCCCGGACTGACAGGCTGACGCGGcgtctg > 2:2833257/1‑149 (MQ=255) gagaCTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCttg > 2:1315953/1‑150 (MQ=255) atattttGGCACCGATTCGCGGTCCTTTCCCCACACAAGCCCGATCCCAAAACCCAAATGGGGGAGCGCCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCttgtt < 1:3845826/147‑1 (MQ=37) ttttGGGACGGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCTATGGGGGAGCGGGGTTGTGTCGCGATGGGCTGCAAAGCAGCGCCAATAGTCGATCAGTTAACGCGGAATGTCAGGCTGTCGCGGGttgttgttgat > 2:3845826/1‑148 (MQ=38) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGcc > 2:720128/1‑150 (MQ=255) tGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCtt < 2:5074839/150‑1 (MQ=255) gggACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTg < 2:2111477/150‑1 (MQ=255) aggACCGCGAAGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCACTGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATCGTCGATCAGTTAACGCGGACTGACAGGCTGACGCGGCTTCTTGATGCCCTTg > 2:125977/2‑150 (MQ=38) gACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCACCCACAAAGGCCAGGGGGGCGCGGCCGTTTGTCGCGATGGGCTGCAAAGCAGCCCCAAAAGTAGATCAGTTAAAGCGGAATGACACGCTTAAGCGGCTTCTTGGTGCCCGTGcc > 1:60703/1‑150 (MQ=255) cGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAAAAGTCGATCAGGTAAAGCGGAATGACACGCTGACGCGGCGTCTTTTTGCCCATGCCAcc > 1:559127/1‑150 (MQ=38) ttCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGAGCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCtt > 1:4119092/1‑150 (MQ=255) | GGTTTCGTGCGCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTT > NC_002947/5543382‑5543678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |