| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,562,785 | A→C | 11.0% | intergenic (‑156/+175) | PP_4888 ← / ← purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,562,785 | 0 | A | C | 11.0% | 675.2 / 12.9 | 241 | intergenic (‑156/+175) | PP_4888/purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base A (118/89); new base C (3/31); total (121/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.80e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 246 total aligned reads displayed.
CCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCG > NC_002947/5562638‑5562934 | ccTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACg > 2:1547284/1‑150 (MQ=255) tCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGc > 2:317061/1‑150 (MQ=255) tgtTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTg > 1:2692181/1‑150 (MQ=255) tgtTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGACAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTg > 2:2377876/1‑150 (MQ=255) ttttCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTgcg < 1:2343229/150‑1 (MQ=255) tCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGACATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGccc < 1:3844250/150‑1 (MQ=255) tGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCt > 1:1507026/1‑142 (MQ=255) ggCGCCACTATTTTGATGGCATCTACTGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCTGGCGCATTCGCGGGTTAACCCGCTCCTACAACGGCCTGCGCCCAAc > 1:622025/1‑150 (MQ=255) gcCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCAt > 1:4935955/1‑150 (MQ=255) gcCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCAt > 2:2817447/1‑150 (MQ=255) aTTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgt < 2:1842962/150‑1 (MQ=255) aTTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgt < 2:4675710/150‑1 (MQ=255) aTTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgt < 1:3892092/150‑1 (MQ=255) tttGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgtgt < 1:4834978/150‑1 (MQ=255) tttGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgtgt < 1:2447743/150‑1 (MQ=255) tttGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgtgt < 2:5263702/150‑1 (MQ=255) aTGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGccc < 2:3241993/150‑1 (MQ=255) tGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAAACCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCca > 1:3321150/1‑150 (MQ=255) aTCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATa < 2:1413753/150‑1 (MQ=255) tCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAg > 2:3567519/1‑150 (MQ=255) cAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGc > 2:4157850/1‑150 (MQ=255) aGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCg > 1:5602622/1‑150 (MQ=255) gAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg < 2:3539538/150‑1 (MQ=255) gAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg < 1:4157850/150‑1 (MQ=255) aaaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCggg < 1:2196119/150‑1 (MQ=255) atcttcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGACTAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTAGCGGGTAAACCCGCTCCTACAACGGCATGAGCACAACCATCGTTGTGTGCCCTCATAGGAGCGGGt < 2:2542291/148‑1 (MQ=255) ttcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTa < 2:2505811/150‑1 (MQ=255) cttACCGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATTGGGTTTCGTGTGCAGGCCCATTCGCGTGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAcc < 2:224822/150‑1 (MQ=255) cttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAcc > 1:5163154/1‑150 (MQ=255) ttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAGACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg > 2:3081930/1‑142 (MQ=255) cAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCcgcg < 2:3638755/150‑1 (MQ=255) aGCAAGGGTTGTGCCGCAGGCATCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAATACCGCTCCTAAAACGGCAAGCGCACACCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGa > 2:2581771/1‑150 (MQ=255) gCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGaa > 2:1454391/1‑150 (MQ=255) cAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGact > 1:5206942/1‑148 (MQ=255) cAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAAt > 1:3051231/1‑150 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGCAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCGGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATa < 2:1945568/150‑1 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATa < 2:4384971/150‑1 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATa > 1:3167546/1‑150 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACAGAGGAGCGGGTTTACCCGCGAATa > 2:4901832/1‑150 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCCCACCTACAACGGCCTGCGCCCAACCAACGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATa > 1:168891/1‑150 (MQ=255) ttGTGCCGCTGGCAGCGGGGAACTGCGCCACGGTCTAGCATTGGGGTTTGGTGTGCAGGCCCTTTCGCGGGTAACCCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGGGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTa < 2:5184659/150‑1 (MQ=38) gCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGCGCGGGTTTACCCGCGAATACGGTAgcgg > 1:1250265/1‑150 (MQ=255) ccGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcggc > 2:890642/1‑150 (MQ=255) ccGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGGTGTGTGCCCACCTAGGAGCGGGGTTACCCGCGCATACGGTAgcggc > 1:3583915/1‑150 (MQ=255) cGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGTTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCAACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTg < 2:4052741/150‑1 (MQ=255) cGGGGAAATGCGACATGGTCTAGCATTGGGGTTTCGGGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCACCCATCGTTTTGTGCCAACATAGGAGCGGGTTTCCCCGCGAATACGGTAGCGGCGGCAACGGTg < 2:964419/150‑1 (MQ=38) ggggAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAACCGCGAATACGGTAGCGGCGGCAACGGTgg > 1:3536119/1‑150 (MQ=255) gtgAAATGCGCCAAGGTCTAGCAATGGGGTTTCTTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa < 2:5105401/148‑1 (MQ=255) ggtaaaTGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa < 2:4442074/147‑1 (MQ=255) gggAAATGCGCCCCGGTCTAGCATTGGGTTTTCGTGTGCTGCCCCATTCGCGGCTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATGGTTGTGTGCCCAAATCGGCGGGGGTTAACCCGCGAATACGGTAGCGGCGGCAACGGTGGa < 1:135436/150‑1 (MQ=37) gggAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCCCCTAGGAGCGGGTTTACCCGCGAATACGGGAGCGGCGGCACCGGTGGa > 2:3039537/1‑150 (MQ=255) ggAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCGACCCCGGCCTGCGCCCCACCCTCGGTGTGTGCCCACAGAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTggct > 1:3868355/1‑148 (MQ=38) gcgcCACGGTCTAGCATTGGGGTTTGGTGTGCCGGCCCATTGGCGGGTAACCCCGCTCCTCCACCGGCCGGCGCCCAACCCTGGTTGTGGGCCCACATCGGCGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCgg < 1:805942/150‑1 (MQ=25) cgcCACGGTCTAGCATTGGGGTTTGGTGTGCAGGCCCATGGGGGGGTAACCCCGCTCCAACACCGGCCGGCGCCCAACCATGGTTGTGGGCCCACATCGGCGGGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt < 1:1098681/150‑1 (MQ=25) ccAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGCATACGGTAGCGGCGGCAACGGTGGATTACCGGTgg > 2:218672/1‑150 (MQ=255) ccAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTgg > 2:5044839/1‑150 (MQ=255) cAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCGACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCCCAGAGGAGCGGGTTTAACCGCGACTACGGTAGCGGCGGCAACGGTGGATTACCGGTGGa > 1:2920450/1‑150 (MQ=38) gTCTAGCATTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATAtt < 1:1855105/150‑1 (MQ=255) tCTAGCATTGGGGTTTGGTGTGCAGGCCCATTCGGGGGTAACCCCGCTCATACACCGGCCGGCGCCAACCCTGCGTTGTGTCCCCACATCGGCGCGGTTTAACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg < 1:4792347/150‑1 (MQ=25) tCTAGCATTGGGGTTTCGTGTGCCGGCCCATTCGCGGGTAACCCCGCCCCTACACCGGCCGGCGCCCAACCATCGTTGTGTGCCCACACCGGCGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg < 1:1547284/150‑1 (MQ=38) tCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg < 2:4856763/150‑1 (MQ=255) tAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGTGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGc > 2:1262675/1‑150 (MQ=255) cAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACCACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAg < 2:1943483/150‑1 (MQ=255) aTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGca > 1:428357/1‑150 (MQ=255) tGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGACTACGGTAGCGGCGGCAACGGTGGATTACCGGTGGCTATTGGCCAGccc > 2:1079755/1‑148 (MQ=255) tGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGACTACGGTAGCGGCGGCAACGGGGGATTACCGGTGGATATTGGCCAGcac > 2:3412145/1‑150 (MQ=255) ggggTTTCGTGTGCAGGCCCTTTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGcaca < 2:4521221/150‑1 (MQ=255) ggggTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGcacc > 1:4522863/1‑149 (MQ=255) ggTTTCGTGTGCTGGCCCATTCGCGGTTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGa < 2:1181457/150‑1 (MQ=255) ggTTTCGTGTGCTGGCCAATTAGCGTGTAAACCCGCTCATACACCGCCCTGCGCCCAACCATGGTTTTTTCCACACATAGTAGCGTTTTTACCCGCTAATACGGTAGCTGCGGCATCTGTGTATTACCTGTGGATATTGGCCAGCACAGa < 2:766377/150‑1 (MQ=255) ggTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCGACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATAGTGGCCAGCACAGa > 1:3986988/1‑150 (MQ=255) gTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCGACAACGGCCGGCGCCCAACCATCGGTGTGTGCCCACAAAGGAGCGGGTTTACCCCCGAATACGGTAGCGGCGGCAACGGTGGGTTACCGGTGGGTTTTGGGCCGCACAGAc > 1:3768570/1‑150 (MQ=37) cGTGTGCAGGCCCATTCGCGGTTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCTTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGc < 2:1039973/150‑1 (MQ=255) tgCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACAGAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCcac < 2:1190158/150‑1 (MQ=255) aGGCCCTTTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACaaa < 2:5343927/150‑1 (MQ=255) aGGCCCATTCGCGGTTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACaaa < 2:2950551/150‑1 (MQ=255) aGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATCGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACaaa < 2:2845122/150‑1 (MQ=255) ggCCCTTTGGGGGGTAACCCCGCTCCTACAAGGGCCGGCGCCCAACCTTGGTTGTGTGCCCACTTTGGAGGGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGTTTACCGGTGGATATTGGCCTGCACAGACATGCCCACAAAt < 1:4645239/150‑1 (MQ=25) gCCCATTCGCGGGTAAAACCGCGCCGACAACGGCCTGCGCCCAACCCACGTTGTGTGCCCCCATAGGAGCGGGTTTACCCGCGAAAACGGGAGCGGCGGCAACCGTGGATTAACGGTGGATATTGGCCAGCACACACATGCCCACAAATg > 1:3377082/1‑150 (MQ=37) ccATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTCCCGGTGGATATTGGCCAGCACAGACATGCCCACCAAGGaa > 2:5628107/1‑150 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCCTCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGGAGCGGCGGCAACGGGGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGaaa > 1:1162047/1‑150 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGaaaa > 2:1903487/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAAc < 2:1671426/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAAc < 1:405676/150‑1 (MQ=255) cgcgGGTAAAACCGCTCCAACAACGGCCAGCGCCCAACCATCGTTTTTTGCCAACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGAACAGACATGCCCACAAATGAAAAcgc > 2:1323933/1‑150 (MQ=37) gcgGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAAcgcc > 2:1753466/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAAcgcc > 1:1345067/1‑150 (MQ=255) aaccccGCTCCTACACGGGCGTGCGCCAACCCTTGTTTGTGTGCCAACTTTGTTGGGGTTTTACCCGCTAATACGGTAGCGGCGGCAACGGTGGATTACGGGTGTATATTGGCCAGCACATACATGCCCACAAATGAAAACGCCGCGGcc < 1:2874428/147‑1 (MQ=19) aaCCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGc < 1:370034/112‑1 (MQ=255) aCCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCt > 2:3714902/1‑150 (MQ=255) ccGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCtgc > 2:3800606/1‑148 (MQ=255) gCTCCTACCACGGCCTGCGCCCAACCATGGTTGTGGGCCCACATAGGAGCGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTtctc < 2:3771166/150‑1 (MQ=255) gCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTGACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTtctc < 2:5512354/150‑1 (MQ=255) gCTCCTACAACGGCCTGCGCCCAACAATCGTTGTGTGCCCACATAGGAGGGGTTTTACCCGCGAATACGGTAGCGGCGGAAACGGTGGATTACCGGTGTATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTtctc < 1:2050077/150‑1 (MQ=39) tCCTACAACGGCCTGCGCCAAACAATCTTTGTGTGCCCAAATAGGAGCGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAg < 1:438072/150‑1 (MQ=38) ccTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTGCTCAgg > 2:4203777/1‑150 (MQ=255) tACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGc > 1:4685532/1‑150 (MQ=255) tACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGc > 2:2640487/1‑150 (MQ=255) aaCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTGAGAAGGGCcgc < 2:4935955/150‑1 (MQ=255) aCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTGAGAAGGGCcgcg > 1:5614018/1‑150 (MQ=255) | CCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCG > NC_002947/5562638‑5562934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |