| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,587,560 | A→C | 5.3% | intergenic (+137/+30) | PP_4910 → / ← PP_4911 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,587,560 | 0 | A | C | 5.3% | 868.6 / 24.2 | 265 | intergenic (+137/+30) | PP_4910/PP_4911 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (117/132); new base C (4/11); total (121/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 269 total aligned reads displayed.
GCACCGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTCG > NC_002947/5587411‑5587704 | gCACCGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGaa > 1:4050355/1‑150 (MQ=255)gCACCGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGaa > 2:1732360/1‑150 (MQ=255)gCACCGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCACAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGaa > 1:2771719/1‑150 (MQ=255) gcgcCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCgg < 2:5416297/150‑1 (MQ=255) ccTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCt < 1:2149615/150‑1 (MQ=255) tGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCATTCGCTGCGGGCttt < 1:259739/150‑1 (MQ=255) tGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCttt < 2:4398502/150‑1 (MQ=255) gACAGGTAGACGCGTCATCTAGAGCGCATGTCTTGAGCCAGGCTTGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGACAATAGCGCAAACCCGCTCCTACGAAGACGGGCAGATACAAAAAAGCCCGCATTCGCTGCGGGCtttt < 1:3337281/150‑2 (MQ=255) gACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACGACAAAGCCCGCATTCGCTGCGGGCtttt < 1:5255027/150‑2 (MQ=39) cAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCATTCGCTGCGGGCtttttt < 1:2431089/150‑4 (MQ=255) cAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTc < 1:1574503/150‑1 (MQ=255) cAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTc < 1:3493217/150‑1 (MQ=255) ggTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCATTCGCTGCGGGCttttttgt < 2:4883181/150‑6 (MQ=255) gTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACGACAAAGCCCGCATTCGCTGCGGGCTTTTTTGTa < 1:1585782/150‑1 (MQ=38) aCGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTg > 1:747721/1‑150 (MQ=255) aCGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTg > 1:217151/1‑150 (MQ=255) aCGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTg < 1:306397/150‑1 (MQ=255) cgcgACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCTATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCTTCAGATTCAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCTTATCttg < 2:2835602/150‑3 (MQ=255) tCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTg > 1:606297/1‑150 (MQ=255) tCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTg < 2:725332/150‑1 (MQ=255) aCAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATc < 2:3646811/150‑1 (MQ=255) gcgcATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGa > 2:863670/1‑150 (MQ=255) cgcATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGttt > 1:2999534/1‑142 (MQ=255) cgcATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGttt < 2:2999389/142‑1 (MQ=255) cgcATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGaa < 1:2804016/150‑1 (MQ=255) cgcATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGaa < 1:4346666/150‑1 (MQ=255) gcATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAAc < 2:706495/150‑1 (MQ=255) aTGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCg > 1:723032/1‑150 (MQ=255) gTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGAt < 1:2523165/150‑1 (MQ=255) gTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGAt < 1:2523050/150‑1 (MQ=255) ttGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATaaa > 1:700825/1‑150 (MQ=255) ttGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATaaa > 1:1676739/1‑150 (MQ=255) ccAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTGTGATCAGAACCGATAAACTTcc > 2:3397453/1‑150 (MQ=255) tGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCg > 2:1548/1‑150 (MQ=255) tttCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTg > 1:4553048/1‑150 (MQ=255) ttCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGc > 1:142476/1‑150 (MQ=255) ccTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGa < 2:2208154/150‑1 (MQ=255) ttGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAAt > 2:4781521/1‑150 (MQ=255) gATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGc > 2:2306142/1‑150 (MQ=255) gATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTAGATCAGAACCGAAAAACTTACAAATCGGTGCGAATAGGc > 1:1904920/1‑150 (MQ=255) gATCACCTGCCTGGCACAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGc < 2:1568498/150‑1 (MQ=255) aacacaTGCATGGCGCAAGATCAATCCAATAGCCAAAACAAGCTCATACGAAGACCGGCACATACAAAAAAGCCCGCAGCGAATGAGGGCTTTGACGTATCTGGCCGTTTGATCAGAACCGATAAACTACAATAACGGTGCGAATCGGCg > 2:3061429/3‑150 (MQ=255) tCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGa > 1:3156232/1‑150 (MQ=255) tCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGa < 1:3042046/150‑1 (MQ=255) tCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGa < 1:4947774/150‑1 (MQ=255) tCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGa > 1:948117/1‑150 (MQ=255) tgcctgGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCa > 2:3171763/1‑150 (MQ=255) cctgGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATc < 1:837700/150‑1 (MQ=255) cctgGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATc > 2:5087825/1‑150 (MQ=255) ctgGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACACAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCg < 2:4743009/150‑1 (MQ=255) gcgcAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGa < 1:4760604/150‑1 (MQ=255) cgcAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAt > 2:2455493/1‑150 (MQ=255) gcAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAtt > 2:1231496/1‑150 (MQ=255) cAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAttt < 1:4434335/150‑1 (MQ=255) cAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAttt > 1:394298/1‑150 (MQ=255) aaGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAtttt < 2:29052/150‑1 (MQ=255) aaGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAtttt > 1:3663458/1‑150 (MQ=255) gATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTgg < 2:1637078/150‑1 (MQ=255) gATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTgg > 1:1534524/1‑150 (MQ=255) gATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTgg < 1:2728597/150‑1 (MQ=255) aTCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTggg > 1:2287514/1‑150 (MQ=255) tCCAGCCAAGAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCAGATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGt < 1:4327534/150‑1 (MQ=255) cAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGttt > 1:1030586/1‑150 (MQ=255) aGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTtc > 1:172496/1‑150 (MQ=255) gCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTtct < 2:1447760/150‑1 (MQ=255) gcgcAAACCCGCTCCTACGAAGTCCGGCAGATACAAAATAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGccc > 2:2083502/1‑150 (MQ=255) cgcAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGcccc < 1:689583/150‑1 (MQ=255) cgcAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGcccc < 1:3511631/150‑1 (MQ=255) aaaCCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttc < 1:1790138/150‑1 (MQ=255) aaaCCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttc < 1:4410921/150‑1 (MQ=255) aaCCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttct < 2:3230494/150‑1 (MQ=255) aCCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCcttctt < 1:4601421/150‑1 (MQ=255) cccGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGAGTTTGGGTTTCTCCGGCCCCttcttc > 1:4793267/1‑150 (MQ=255) ccGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCa > 1:4123964/1‑150 (MQ=255) cGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCAc < 2:1791414/150‑1 (MQ=255) gCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCAcc > 1:3159825/1‑150 (MQ=255) cTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCt < 1:5400229/150‑1 (MQ=255) tACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGt > 1:1140768/1‑150 (MQ=255) aCGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTc > 2:329428/1‑150 (MQ=255) gAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCTCCTGAGTCgg > 2:4649106/1‑150 (MQ=255) gAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCgg > 1:5513650/1‑150 (MQ=255) gAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCgg < 2:4553048/150‑1 (MQ=255) aaGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGt < 2:2134021/150‑1 (MQ=255) aGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTg > 2:275447/1‑150 (MQ=255) ccGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAg < 2:5287196/150‑1 (MQ=255) cGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGc > 1:4705121/1‑150 (MQ=255) cGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGc > 2:68131/1‑150 (MQ=255) gCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCgg < 2:3144616/150‑1 (MQ=255) cAGATACGACAAAGCCCGCATTCGCTGCGGGCTTTTTTGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCggg > 1:5101314/1‑150 (MQ=37) cAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCggg < 2:1789950/150‑1 (MQ=255) cAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCggg < 2:5290182/150‑1 (MQ=255) tACAAAAAAGCCCGCAGCGATTGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGTTAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCttt < 1:1314888/150‑1 (MQ=255) aacacaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTc < 2:3909907/145‑1 (MQ=255) aaaaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTc < 2:4989156/150‑1 (MQ=255) aaaaaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTc > 2:2424733/1‑150 (MQ=255) aaaGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGt > 1:5575519/1‑150 (MQ=255) cGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCctct > 2:1805187/1‑150 (MQ=255) gCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGt < 1:3273708/121‑1 (MQ=255) cAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTc < 2:4050355/150‑1 (MQ=255) aGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTCg < 1:2097785/150‑1 (MQ=255) | GCACCGCGCCTGACAGGTAGACGCGACATCTACAGCGCATGTCTTGAGCCAGGCTGGTTTCCTTGCGATCACCTGCCTGGCGCAAGATCCAGCCAATAGCGCAAACCCGCTCCTACGAAGACCGGCAGATACAAAAAAGCCCGCAGCGAATGCGGGCTTTGTCGTATCTGGCCGTTTGATCAGAACCGATAAACTTCCATATCGGTGCGAATCGGCGAGGCCATCGGGATTTTGGGTTTCTCCGGCCCCTTCTTCACCTGAGTCGGTGCAGCGGGCTTTTTCGGTGCCTCTTCG > NC_002947/5587411‑5587704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |