| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,729,310 | A→T | 12.2% | intergenic (‑207/+87) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,729,310 | 0 | A | T | 12.2% | 427.2 / 9.5 | 181 | intergenic (‑207/+87) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base A (94/53); new base T (12/11); total (110/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
GGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAAT > NC_002947/5729161‑5729458 | ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTa < 2:5590707/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAg < 1:388680/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCCCGCCTACAAGGGCATG‑TGTAT‑ACCAGGTAg > 1:4653906/1‑150 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGCGAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAg < 1:2873426/150‑1 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGGCTG‑TGTAT‑CCCGGGTAGGa > 2:3601551/1‑150 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGTCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGc < 2:1707454/150‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGTGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGc < 2:4315148/150‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGc < 2:1707347/150‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGc < 2:2695570/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCgg < 2:5570820/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCgg < 2:3844005/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCgg < 1:3949222/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCgg < 1:4096642/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCggg < 2:4026317/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTCTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCggg < 2:562024/150‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCgg < 1:2500970/147‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCgg > 2:2500970/1‑147 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGtt < 2:432038/150‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCACCAACAAGGGCCGG‑TGTAT‑CCCGGGGAGGGGCGGGtt > 2:1211459/1‑150 (MQ=255) gtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTTG‑AACCC‑CACCTACAAGGGGATG‑TGTAA‑ACCAGGTAGGAGCggggtga > 2:1860191/1‑146 (MQ=255) ggAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCAACAAGGGCAAG‑TGTAT‑CCCGGGGATGAGCGGGTTCAccccc > 2:1237739/1‑148 (MQ=255) gcgggATGCTAACGCAGGGCGGCCCGTGGACCTCGAGCCGCCGGGGTACTTTGTTGGCCAAATTGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACCCGGG‑ATA‑CACATGCCCTTGTAGGAGGGGGTTCACCCGCGaa < 2:287956/148‑1 (MQ=18) ggATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AAACCGCTCCAACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAagag > 2:817537/1‑150 (MQ=255) gCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑TACCCCCACCAAAAAGGGCCAG‑TGTAA‑GCCGGGGAGGAGCCGGGTGACCCCCGAAGAGGccc > 1:4435342/1‑150 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AAACCGCTCCTACAAGGGCAAG‑TGTAT‑CCCGGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCgg > 1:5075908/1‑150 (MQ=255) aaCGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑GG‑TAACCCCCCCAAAAAGGGCCTG‑TGTAT‑ACCAGGTTGGGGCGGGTTGACCCCCCCAGAGGccccgg > 1:1592836/1‑147 (MQ=255) gCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑GG‑TACCCCCGCCGGAAAAGGCAAG‑GGTGT‑ACCGGGGAGGGGCGGGGTGGCCCCCGCAGACGCCCGGGCaa > 1:1117502/1‑149 (MQ=255) ccGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑GACCCGCGCCTACAAAGGCCTG‑TTTAT‑GCCGGGTTGGAGCGGGGTGACCCCCGGAGAGGCCCCGGCAAGCGCCCCgga > 1:1696318/1‑148 (MQ=255) tGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCCCGCCTACAAGGGCCTG‑GGTAT‑CCCTGGGAGGGGCGGGTTCACCCGCGCAGAGGCCCGGGCCTGCGCCCCGGAggg > 2:3297071/1‑150 (MQ=255) tGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑GG‑AACCCCCGCCTAAAAGGGCCAG‑TTCAA‑CCCGGGTTGGTGCGGGTTGAACCGCGAACAGGCCCCGTCAAGCGCCCCCGAggg > 1:405729/1‑150 (MQ=255) ccGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTATGCCAAAAAGCTTCGCGGG‑TG‑AAACAGCTACAACCAGGGCATG‑TGTAA‑ACCTGGGAGGGGCGGGTTCAACCGCGAAGAAGCCCCGTCATGCGCCCCCGAGTGCGGGGTCAtag > 1:5116812/1‑148 (MQ=255) ccgggggACTTTGTTGGCCAAAAGGCGGGGGTTTGGCCAAAAAGCTTCGCGGG‑TG‑ACCCCGCTCCTACCCGGGCATG‑TTTAT‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 2:2465436/148‑1 (MQ=255) cAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGTGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 2:3088571/150‑1 (MQ=255) aGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TGTAACCCCGACGAAAAAGGGC‑TG‑TGTAT‑CCCAGGTGGGTGCGGGTTCACCCCCGGAGAGGCCCGGGGAAGCGCCCCCGAGGGGGGGGTCATAggggg > 2:36802/1‑149 (MQ=255) ggggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACACCCACCAACAAGGGCATG‑TGTAT‑CCCAGGTAGGAGCCGGTTCACCCGCGAAGAGGCCCGGTCAAGCGCCCCCTAGGGCCGGGTCAACGGGgcgc > 2:1664568/1‑150 (MQ=255) gggACTTTGTGGGCCAAACTGCGGGGGTTCGGCCAAAACGCTCCGGGGG‑TG‑ACCCCGCCCCACCACGGGCATG‑TGTAG‑CCCTGGTCGGCGCGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGcc < 2:1117502/150‑1 (MQ=255) tgttgGCCAAACTGTGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgc < 2:1259138/150‑1 (MQ=255) gttgCCCACACTGCGGGGGTAAGGCCAAAACGCTCCGCGGG‑TG‑ACCCCGCCCCCACACGGGCCTG‑TGTAG‑CCCTGGTAGGCGCGGGTGCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgcc < 2:2811907/150‑1 (MQ=255) ttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgccg < 2:5494298/150‑1 (MQ=255) ccAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TT‑AACCCCCTCCAACAAGGGCATG‑TGTAT‑CCCTGGGAGGAGCGGGTTCACCCCCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGCACCGCCGCGac > 2:3224303/1‑149 (MQ=255) ccAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGaa > 2:4686466/1‑150 (MQ=255) cAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCCCTCCTACAAGGGCCTG‑TGTAT‑CCCGGGTAGGCGCGGGGTCACCCGCGCAGAGGCCCGGTCATGCGCCCCCTAGGGCGGGTTCATCGGGGCGCCCAACCCCCGCGAAc > 2:5411402/1‑150 (MQ=255) gtggggtTTTGGCCAAAACGCTTGGGGGG‑TT‑AACCCGCTCCTACACGGGCATG‑TTTAT‑CCGTGTTAGGAGGGGGTAACCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGAccc < 2:1395261/148‑1 (MQ=255) aGGCCAAAAAGCTTCGCGGG‑GG‑AACCCCCTCCTACAAGGGCCTG‑GGGAT‑ACCGGGGAGGAGCGGGTTCACCCGCGCAGAGGCCCGGGCATGCGCCCCGGAGGGCGGGTTCATCGGGGCGCCGAACCGCCCCGAACACACCCCCTCAAgcg > 2:3386166/1‑150 (MQ=255) ggCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACACGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAgcgc < 2:5302004/150‑1 (MQ=255) acaGCTTCGCGGT‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCcgacga < 2:5184501/148‑1 (MQ=255) gcgggggg‑CG‑ACCCCGCCCCTACACGGCCATG‑TGTAT‑CCCTGGTCGGCGGGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTc < 1:348710/145‑1 (MQ=255) gcgGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGt < 2:1247225/150‑1 (MQ=255) g‑TG‑AACCGGCTCCAACATGGG‑ATGTTGTAC‑CCCTGGTAGGTGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:5003019/150‑1 (MQ=255) tG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGcc > 2:4116977/1‑150 (MQ=255) gtcaccccGCTCCTACACGGGCTTG‑TGTAC‑CGGGGGTTGGTGGGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:4943487/145‑1 (MQ=255) aaCCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 2:4981501/1‑150 (MQ=255) aaCCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 2:4981505/1‑150 (MQ=255) ccccGCTCCTCCAGGGGCTTG‑TGTCG‑CCCGGTGTGGGGGGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGc < 1:3984444/149‑1 (MQ=255) cccGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:105503/1‑150 (MQ=255) cccGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:3694133/1‑150 (MQ=255) ccGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:3780183/1‑150 (MQ=255) ccGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:4514057/1‑150 (MQ=255) ccGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:2010716/1‑150 (MQ=255) ccGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:966152/1‑150 (MQ=255) ccGCACCTACAAGGGATTG‑TTTAT‑CCCTGTTAGGTGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt < 1:1252651/150‑1 (MQ=255) tCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 2:1564668/1‑150 (MQ=255) tCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 1:2885863/1‑150 (MQ=255) cTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 2:4855648/1‑150 (MQ=255) cTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 1:323036/1‑150 (MQ=255) cTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg < 2:3694420/150‑1 (MQ=255) aaactcgggCTTG‑TTTAG‑CCCTGGTTGTCGGGGTTCCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg < 1:2558563/144‑1 (MQ=255) tACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:9526/1‑150 (MQ=255) aCAAGGGCATG‑TGTAT‑CCCTGGTAGTAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:1679478/1‑150 (MQ=255) aCAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 2:3089813/1‑150 (MQ=255) aCAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:2651543/1‑150 (MQ=255) aCAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:3467397/1‑150 (MQ=255) aCAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:5517839/1‑150 (MQ=255) aaaGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGTTTAACCCGCGAAGAGGCCCGGTCATGCTCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt < 2:1981223/149‑1 (MQ=255) aaGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTg > 2:2305106/1‑150 (MQ=255) aaGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTg > 1:4865179/1‑150 (MQ=255) aGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg < 1:2265784/131‑1 (MQ=255) aGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 2:2265784/1‑131 (MQ=255) ggCATG‑TGTAT‑CCCGGGTAGGCGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCaa < 1:2192118/150‑1 (MQ=255) gCATG‑TGTAT‑CCCTGGTTGGAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAAc < 2:158113/150‑1 (MQ=255) cATG‑TGTAT‑CCCTGGTCGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACg < 1:2309083/150‑1 (MQ=255) tg‑tgCAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGc < 2:2368000/150‑1 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:5567885/1‑150 (MQ=255) aT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAg > 1:2703107/1‑150 (MQ=255) aT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAg > 2:617757/1‑150 (MQ=255) t‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 1:1019975/1‑150 (MQ=255) t‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGCCCAGCACATGCGCCCCCTAGCGCTGGATCAACGGCGCGCCGAACCGCCGCGAACATAACCGAACAAGCGCAGACGAGCCTCGGTTGGCCTGCGTTATCAGGGTCCAACGGCAACAgc > 2:2131837/1‑150 (MQ=255) gcccTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 1:798795/2‑150 (MQ=255) gcccTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 1:798843/2‑150 (MQ=255) cccgtGGTCGGCGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc < 1:1211476/146‑1 (MQ=255) ccTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcgg > 1:2101476/1‑150 (MQ=255) ccTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcgg < 2:5094958/150‑1 (MQ=255) ccTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcgg > 1:5359615/1‑150 (MQ=255) cTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc > 2:4007724/1‑150 (MQ=255) cTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc > 2:1020326/1‑150 (MQ=255) cTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc > 1:4962355/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 2:463946/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 1:5289793/1‑150 (MQ=255) gTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGaa > 1:1071607/1‑150 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAAt > 2:3767959/1‑150 (MQ=255) | GGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGG‑TG‑AACCCGCTCCTACAAGGGCATG‑TGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAAT > NC_002947/5729161‑5729458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |