| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,729,313 | A→T | 10.2% | intergenic (‑210/+84) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,729,313 | 0 | A | T | 10.2% | 431.6 / 3.0 | 179 | intergenic (‑210/+84) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base A (92/47); new base T (7/8); total (111/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 183 total aligned reads displayed.
CGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGG > NC_002947/5729164‑5729462 | cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGGCTGTGTAT‑CCCGGGTAGGa > 2:3601551/1‑150 (MQ=255) gAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAg > 2:5180621/1‑150 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGTCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 2:1707454/150‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 2:2695570/150‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCCTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 1:1480521/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 2:3844005/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 2:5570820/150‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg > 2:2500970/1‑147 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:2500970/147‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGtt < 2:432038/150‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCACCAACAAGGGCCGGTGTAT‑CCCGGGGAGGGGCGGGtt > 2:1211459/1‑150 (MQ=255) gtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCCCGCCTCCAAGGGCAGGGGTAT‑CCCGGGGAGGGGCGGGGTcc > 2:1859955/1‑149 (MQ=255) tATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCCCGCCTACAAGGGGCGGTGTAT‑CCCGGGGGGGGGCggggtgac > 1:1247225/1‑145 (MQ=255) tATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCCCGCCTACAAGGGCAAGTGTAT‑CCCGGGTAGGAGCGGGTTGAc > 1:2733355/1‑150 (MQ=255) ggAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCAACAAGGGCAAGTGTAT‑CCCGGGGATGAGCGGGTTCAccccc > 2:1237739/1‑148 (MQ=255) gcgggATGCTAACGCAGGGCGGCCCGTGGACCTCGAGCCGCCGGGGTACTTTGTTGGCCAAATTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCCGGG‑ATACACATGCCCTTGTAGGAGGGGGTTCACCCGCGaa < 2:287956/148‑1 (MQ=18) ggATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCGCTCCAACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAagag > 2:817537/1‑150 (MQ=255) aTGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGTTACCGCTGCTTAAATGGGGTGTGTTT‑GGCGGGTTGGTGGGGGTTGAACCGCGAAGTggg > 1:2181713/1‑149 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCGCTCCTACAAGGGCAAGTGTAT‑CCCGGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCgg > 1:5075908/1‑150 (MQ=255) aaCGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCTCCGAACACGGCCTGTGTAT‑CCCGGGTAGGTGCGGGTTCACCCCCGCAGAGGCCCggg > 2:1947904/1‑149 (MQ=255) aTGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCCCGCCAACCAGGGCCTGGGTAT‑CCCGGGTGGGAGCGGGTTACCCCGCGCAGAGGCCCGGGCAAgc > 1:925304/1‑150 (MQ=255) aTGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGGACCCGCGACGACAAGGGCAGGGGTAT‑ACCGGGGTGGAGCGGGTTCACCCCCCCAGAGGCCCGGGCAAgc > 1:2656309/1‑150 (MQ=255) gTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAgg < 2:4107230/150‑1 (MQ=255) tGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGAACCCGCTCCTACCAGGGGATGGGGAT‑CCCGGGGTGGGGCGGGTTCACCCGCGCCGAGGCCCGGTCAGGCGCCCCGGAggg > 2:3297044/1‑150 (MQ=255) tGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGAACCCCCGCCTAAAAGGGCCAGTTCAA‑CCCGGGTTGGTGCGGGTTGAACCGCGAACAGGCCCCGTCAAGCGCCCCCGAggg > 1:405729/1‑150 (MQ=255) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCCCACCAAAAACGGCCTGTGTAT‑ACCAGGTAGGAGCCGGTTCACCCCCCAAGAGGCCCCGTCATGCCCCCCCTAGGGCgggg > 2:526686/1‑149 (MQ=255) ccGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTATGCCAAAAAGCTTCGCGGGTGAAACAGCTACAACCAGGGCATGTGTAA‑ACCTGGGAGGGGCGGGTTCAACCGCGAAGAAGCCCCGTCATGCGCCCCCGAGTGCGGGGTCAtag > 1:5116812/1‑148 (MQ=255) ccgggggACTTTGTTGGCCAAAATGAGGGGGTTCGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 2:5507732/148‑1 (MQ=255) ccgggggACTTTGTTGGCCAAAAGGCGGGGGTTTGGCCAAAAAGCTTCGCGGGTGACCCCGCTCCTACCCGGGCATGTTTAT‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 2:2465436/148‑1 (MQ=255) cAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 1:4215414/150‑1 (MQ=255) cAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGTAACCCCGCCGAAAAGGGGATGTTTTTACCCGGGTTGCTG‑GGGGTGGCCCGCCGAGTGGCCCGGGGATGCGCCCCGGGGGGGGGGGTGAGCgggg > 1:4943956/1‑150 (MQ=255) aGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCGCTCCTACAAGGGGCTGTGTGT‑CCCTGGTTGGCGCGGGGGGACCCCCGCCCAGGCCCGGGCCTGCGCCCCCGAGGGCGGGGTCATAggggg > 2:36740/1‑149 (MQ=255) aGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGGACCCCCTACTACAACGGCCTGTGTCT‑CCCTGGGAGGATCGGGTTGAACCGCGCAGAGGCCCGGTCATGCGCCCCGGGGGGCGGGGTGATAggggg > 2:36833/1‑149 (MQ=255) gggACTTTGTGGGCCAAACTGCGGGGGTTCGGCCAAAACGCTCCGGGGGTGACCCCGCCCCACCACGGGCATGTGTAG‑CCCTGGTCGGCGCGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGcc < 2:1117502/150‑1 (MQ=255) gACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGa < 2:427048/150‑1 (MQ=255) tgttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgc < 2:1259137/150‑1 (MQ=255) tgttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCCCTACAAAAAGGGCCTGTGTAT‑CCCGGGGAGGGGCGGGTTCACCCGCGCAGAGGCCCGGTCATGCGCCCCGGATGGCGGGTTCATCGGGGCGCCGAAcccc > 2:5306857/1‑148 (MQ=255) gttgCCCACACTGCGGGGGTAAGGCCAAAACGCTCCGCGGGTGACCCCGCCCCCACACGGGCCTGTGTAG‑CCCTGGTAGGCGCGGGTGCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgcc < 2:2811907/150‑1 (MQ=255) ccAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGGAACCCCTCCAACAACGGCATGGGTAT‑ACCGGGGAGGAGCGGGTTCACCCCCGCAGAGGCCCCGGCAATCGCCCCGTAGGGCGGGGTGATCGGGGCGCCGAACCCCCCCGaa > 2:2355084/1‑150 (MQ=255) gtggggtTTTGGCCAAAACGCTTGGGGGGTTAACCCGCTCCTACACGGGCATGTTTAT‑CCGTGTTAGGAGGGGGTAACCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGAccc < 2:1395261/148‑1 (MQ=255) gggggTTAGGCCAAAAAGCTTCGCGGGTGAAACCGCTCCTACAAGGGCCAGTGTAT‑CCCTGGTAGGCGCGGGTTCACCCCCGAAGAGGCCCGGTCAAGCGCCCCCGAGGGCGGGGTCATCGGGGCGCCCACACCCCGCGCCCACACCCGa > 2:1695089/1‑150 (MQ=255) ggggTTAGGCCAAAAAGCTTCGCGGGTGTACCCGCTCCTAAAATGGGATGTGTAT‑GCCTGGTTTGTGCGGGTTGAGCCGCGAAGAGGGCCGGTCATGCGCCCCGTATGGGGGGTTGATGGGGGCGCCGTACCGCCGCGAACAGAACCggt > 2:2949185/1‑148 (MQ=255) aaaGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCcgacga < 2:5592324/150‑1 (MQ=255) cgCTTCGCGGGGGACCCCGCTCCTACCCGGGCAGGGGTAT‑CCCTGGTTGGCGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAgg < 2:4016621/149‑1 (MQ=255) ttCGCGGGTGAACCCGCTCCTACAAGGGCCTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGAGCAAGCGCCGACGAGGCTc > 2:4902799/1‑150 (MQ=255) gcggggggCGACCCCGCCCCTACACGGCCATGTGTAT‑CCCTGGTCGGCGGGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTc < 1:348710/145‑1 (MQ=255) gTGAACCCGCTCCTCCATGGGCTTGTGTAC‑CCCGGGTTGGTGCGGTTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:5002981/150‑1 (MQ=255) aaCCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 2:4981505/1‑150 (MQ=255) ccccGCTCCTCCAGGGGCTTGTGTCG‑CCCGGTGTGGGGGGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGc < 1:3984444/149‑1 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:105503/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 1:3982330/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCAGCGGGGCGCCGACCCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 1:2096391/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:3780183/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:4514057/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:3916140/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:966152/1‑150 (MQ=255) tCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 1:2885863/1‑150 (MQ=255) tCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 2:1564668/1‑150 (MQ=255) ccTACTTGGGCTTGTGTAT‑CCGGGGTTGTGGGGGGTTCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 1:3030732/150‑1 (MQ=255) cTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg < 2:3301817/150‑1 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg < 2:3694420/150‑1 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 2:4836393/1‑150 (MQ=255) tacccgggCATGTGTAT‑CCCTGGTCGGTGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 1:5363343/145‑1 (MQ=255) tACATGGGCTTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 2:4653906/150‑1 (MQ=255) tACACGGGCATGTGTAT‑CCCGGGTTGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 2:5488244/150‑1 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:9526/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:2565291/1‑150 (MQ=255) aacctgggCTTGTGTAG‑CCCTGGTTGGCGCGGGTACCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 1:3456257/145‑1 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGTAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:1679478/1‑150 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 2:3089813/1‑150 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:1679092/1‑150 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:4865860/1‑150 (MQ=255) cacgggCTTTTGTAT‑CCGTGGTAGGTGGGGGTCCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt < 1:1913981/147‑1 (MQ=255) cAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt > 2:103535/1‑150 (MQ=255) aaGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTg > 1:4865179/1‑150 (MQ=255) aaGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTg > 2:2305106/1‑150 (MQ=255) aGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 2:2265784/1‑131 (MQ=255) ggCTTGTTTAT‑CCCTGGTTGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCaa < 1:2192151/150‑1 (MQ=255) gCATGTGTAT‑CCCTGGTTGGAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAAc < 2:158113/150‑1 (MQ=255) cATGTGTAT‑CCCTGGTCGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACg < 1:2309083/150‑1 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:5567885/1‑150 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:5295618/1‑150 (MQ=255) tAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCACGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACa > 1:227033/1‑150 (MQ=255) aT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAg > 2:617757/1‑150 (MQ=255) t‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 1:1019975/1‑150 (MQ=255) t‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGCCCAGCACATGCGCCCCCTAGCGCTGGATCAACGGCGCGCCGAACCGCCGCGAACATAACCGAACAAGCGCAGACGAGCCTCGGTTGGCCTGCGTTATCAGGGTCCAACGGCAACAgc > 2:2131837/1‑150 (MQ=255) gcccTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 1:798795/2‑150 (MQ=255) cccgtGGTCGGCGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc < 1:1211459/146‑1 (MQ=255) ccTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcgg < 2:5094958/150‑1 (MQ=255) cTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc > 2:4007724/1‑150 (MQ=255) cTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc > 1:4449678/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 2:463946/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 1:5289793/1‑150 (MQ=255) gTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGaa > 1:1071607/1‑150 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAAt > 2:3767959/1‑150 (MQ=255) ggAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGc > 2:1992106/1‑150 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCg > 2:4671754/1‑150 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCg > 2:3400476/1‑150 (MQ=255) aGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCgg < 1:4670660/150‑1 (MQ=255) aGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCgg > 2:1527795/1‑150 (MQ=255) | CGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGG > NC_002947/5729164‑5729462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |