Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,739,028 G→C 5.1% intergenic (‑49/+108) proY ← / ← hutH proline (histidine) APC transporter/histidine ammonia‑lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,739,0280GC 5.1% 529.6 / 14.1 156intergenic (‑49/+108)proY/hutHproline (histidine) APC transporter/histidine ammonia‑lyase
Reads supporting (aligned to +/- strand):  ref base G (65/83);  new base C (3/5);  total (68/88)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01

Only 100 of 169 total aligned reads displayed.

GCAGAGCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAG  >  NC_002947/5738879‑5739177
                                                                                                                                                     |                                                                                                                                                     
gCAGAGCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGctgctg                                                                                                                                                       <  1:2312897/150‑1 (MQ=255)
 cAGAGCCGTAGAAACGGCCGGTGCCGATGGCGGAGCCGCGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCtgctgc                                                                                                                                                      <  2:3350824/150‑1 (MQ=255)
 cAGAGCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCtgctgc                                                                                                                                                      <  1:2713002/150‑1 (MQ=255)
 cAGAGCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCtgctgc                                                                                                                                                      <  1:3149559/150‑1 (MQ=255)
  agagCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTgcg                                                                                                                                                     >  2:940198/1‑150 (MQ=255)
    agCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCa                                                                                                                                                   <  1:2983524/150‑1 (MQ=255)
      ccGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGc                                                                                                                                                 <  1:5062912/150‑1 (MQ=255)
      ccGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGc                                                                                                                                                 >  2:1834290/1‑150 (MQ=255)
       cGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGcc                                                                                                                                                <  2:2531662/150‑1 (MQ=255)
         tAGAAAAGGCCGGGGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTGAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCGCAGCAGcccc                                                                                                                                              <  2:2734943/150‑1 (MQ=255)
            acaaGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCGCAGCAGccccctg                                                                                                                                           <  1:2645460/148‑4 (MQ=255)
            aaatGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCGCAGCAGccccctg                                                                                                                                           <  1:2645639/150‑4 (MQ=255)
            aaacGGCCGGTGCGGAGGGCGGAGCCGCGGGCCATGAACCGTATGGGGGGGGCACTTAGCCCGCGCTTGAGACCTTGCGCTTGTGGCATGTCACGTCCTTGATTTGTTTGTGTGGTCGTGAGATTCCGGGGGCTGCGCAGCAGccccctg                                                                                                                                           <  1:197031/150‑4 (MQ=255)
             aaaGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTAAGGGGGCTGCTGCGCAGCCCCTTcg                                                                                                                                          >  1:1616327/1‑150 (MQ=255)
              acggCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTcgc                                                                                                                                         <  2:3039543/148‑1 (MQ=255)
               aGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTcgcg                                                                                                                                        <  1:5218264/150‑1 (MQ=255)
               aGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTcgcg                                                                                                                                        <  1:1927603/150‑1 (MQ=255)
                ggCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCgg                                                                                                                                       <  1:579414/150‑1 (MQ=255)
                ggCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCgg                                                                                                                                       <  2:2253277/150‑1 (MQ=255)
                ggCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCgg                                                                                                                                       <  1:2402069/150‑1 (MQ=255)
                  ccGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGc                                                                                                                                     <  1:3225780/150‑1 (MQ=255)
                   cGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCa                                                                                                                                    >  1:4676644/1‑150 (MQ=255)
                   cGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCa                                                                                                                                    >  1:4676619/1‑150 (MQ=255)
                           aTGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCGTGCCCGcg                                                                                                                            <  2:2606969/150‑2 (MQ=255)
                             ggCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTcc                                                                                                                          >  2:3553112/1‑150 (MQ=255)
                               cGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCca                                                                                                                        <  2:3513064/150‑1 (MQ=255)
                               cGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTACca                                                                                                                        >  2:1932893/1‑150 (MQ=255)
                               cGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTGAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCGTGCCCGcgaagg                                                                                                                        <  2:2996739/150‑6 (MQ=255)
                                 gAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                      <  1:844112/150‑1 (MQ=255)
                                  aGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                     >  2:1642991/1‑150 (MQ=255)
                                   gCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                    <  1:1510745/150‑1 (MQ=255)
                                    ccGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAggg                                                                                                                   <  2:2623457/150‑1 (MQ=255)
                                    ccGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAgaa                                                                                                                   <  1:2206918/150‑3 (MQ=255)
                                      gAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGa                                                                                                                 <  1:3949287/150‑1 (MQ=255)
                                       aGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAt                                                                                                                <  1:304772/150‑1 (MQ=255)
                                         ggCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATgg                                                                                                              >  1:3713592/1‑150 (MQ=255)
                                            cATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGgtgt                                                                                                           >  2:5146292/1‑150 (MQ=255)
                                            cATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGgtgt                                                                                                           <  1:3076969/150‑1 (MQ=255)
                                              tGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGttt                                                                                                         >  2:3112353/1‑150 (MQ=255)
                                               gacaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTAGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGtttt                                                                                                        <  2:4191526/147‑1 (MQ=255)
                                               gAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGtttt                                                                                                        <  2:1674448/150‑1 (MQ=255)
                                                aaaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCtga                                                                                                                                           >  2:3205794/1‑112 (MQ=255)
                                                aaaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCtga                                                                                                                                           <  1:3205794/114‑3 (MQ=255)
                                                 aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCGCCCGCACCCACAGGGGAAGGGGGTTTGc                                                                                                      >  1:2042219/1‑150 (MQ=255)
                                                 aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGc                                                                                                      <  1:1711646/150‑1 (MQ=255)
                                                 aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAAGTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGCTGGTGTTTTGc                                                                                                      >  1:828871/1‑150 (MQ=255)
                                                     gATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCt                                                                                                  <  2:4705626/150‑1 (MQ=255)
                                                      aTGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGGTTTTCAccga                                                                                                 >  1:1437636/1‑148 (MQ=255)
                                                             gggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgt                                                                                          <  2:1490543/150‑1 (MQ=255)
                                                              ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg                                                                                         <  2:570994/150‑1 (MQ=255)
                                                              ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg                                                                                         <  2:132551/150‑1 (MQ=255)
                                                              ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg                                                                                         <  2:4438617/150‑1 (MQ=255)
                                                               gCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTgg                                                                                        <  1:90284/150‑1 (MQ=255)
                                                                 aCTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGa                                                                                      <  2:4977126/150‑1 (MQ=255)
                                                                 aCTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGa                                                                                      >  1:2822175/1‑150 (MQ=255)
                                                                    tAGCCCGCGCTCGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCg                                                                                   <  2:5141229/150‑1 (MQ=255)
                                                                     aGCCCGCGCTTGAGACGTTGAGCTTGTTGCATGTCACGTCCTTGATTTTTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCCGCGGCTTCGCGGGCACGACCGCTCCCACAGTGTATGGTGTTTTGCACATACTTCTGTGGGAGCgg                                                                                  <  1:1293062/150‑1 (MQ=255)
                                                                       cccGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGgc                                                                                <  1:2211071/150‑1 (MQ=255)
                                                                       cccGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCACAGGGGATGGTGGTTTGCACCTACTTCTGTGGgggcgggc                                                                                >  1:345886/1‑150 (MQ=255)
                                                                        ccGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGgcg                                                                               <  1:1064407/150‑1 (MQ=255)
                                                                         cgcgCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGgcgc                                                                              <  1:1044444/150‑1 (MQ=255)
                                                                         cgcgCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGgcgc                                                                              <  2:4637883/150‑1 (MQ=255)
                                                                              ttGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCcg                                                                         >  1:1761407/1‑150 (MQ=255)
                                                                                    ccTTGTGCTTGTTGCATGTCACGTCCTTGATTTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGTTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAgg                                                                   <  2:2675787/150‑1 (MQ=255)
                                                                                      ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCGCCCGCGCCCCCCGGGGGTGGTGTTTTTGACCAAAGTATGTGGGGGCGGGCGCGCCCCCGCAGGgc                                                                 >  1:5171939/1‑150 (MQ=255)
                                                                                      ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGCTGGTGGTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGGAGGgc                                                                 >  1:3668043/1‑150 (MQ=255)
                                                                                          gCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGgccgcc                                                             >  2:5036267/1‑150 (MQ=255)
                                                                                           cTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCACCCACCCGGGATGGTGTTTTGCACCAACATCGGTGGGAGCGGGCGCGCCCCCCCAGGGcccccc                                                            >  1:3626085/1‑150 (MQ=255)
                                                                                            ttgttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCGCTCCCACAGGGGATGGTGTTTTTCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGCAGGGCCGcccc                                                           >  2:665065/1‑149 (MQ=255)
                                                                                              gttgCATGTCACGTCCTTGATTTGTTTTTGGGGTCGTGATATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCCCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGc                                                         <  1:5570272/150‑1 (MQ=255)
                                                                                               ttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTACCACAGGGGATGGTGTTTTGCACCAACTTCTGGGGGAGCGGGCGCGCCCGCGGACGGCCGccccccg                                                        >  1:3159661/1‑146 (MQ=255)
                                                                                                        aCGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCGCCCCCAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAggg                                               >  2:2977083/1‑150 (MQ=255)
                                                                                                          gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCCCGCCCACACGGGATTGTGTTTTTCCCCAACGTCGGTGGGGGCGGGCGCGCCCCCCCAGGGCCGCCCCCCCGCCCCCCGGGc                                             >  1:574724/1‑150 (MQ=255)
                                                                                                          gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc                                             <  2:3714306/150‑1 (MQ=255)
                                                                                                           gccgtGAATTTTTTGGGTGGCGGTGAGTTCCCGGGGGCTGCGGCGCAGCCCCTCCGCGGGCCCGCCCGCGCCCCCGGGGGTTGGTGTTTGGCCCCTACTTCGGTGGGCGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCg                                            <  1:1155395/146‑1 (MQ=255)
                                                                                                              ttGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGGTa                                         >  2:5611922/1‑150 (MQ=255)
                                                                                                              ttGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTAACACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGATCGGGCGCGCCCGCGAAGGGCCGCCCATCGGCCCCAGGGGCGGTa                                         >  2:2193813/1‑150 (MQ=255)
                                                                                                              ttGAATTGTTTGTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACACGGGAAGGTGTTTTGCACCTACTTCGGGGGGAGCGGGCCCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTa                                         >  2:3655062/1‑150 (MQ=255)
                                                                                                               tGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                    <  2:2087370/74‑1 (MQ=255)
                                                                                                                gAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCACGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACa                                       <  2:2822175/150‑1 (MQ=255)
                                                                                                                     gTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgt                                                                                          <  1:5472105/94‑1 (MQ=255)
                                                                                                                     gTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgt                                                                                          >  2:5472105/1‑94 (MQ=255)
                                                                                                                     gTTTTTGGGGTGGTGATATTCTGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTTTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCtt                                  <  1:1755450/150‑1 (MQ=39)
                                                                                                                      tttttGTGGTCGTGAGATTCTGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTGTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTg                                 <  2:4285602/150‑1 (MQ=255)
                                                                                                                      tttttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCACCCCCCGGGGATGGGTTTTTTCACCAAAATATGTGGGAGCGGGCGCGCCCGCCAAGGGCCCCCCACCCGCCCCCGGGGCGTTACAGGCGTg                                 >  1:2159260/1‑150 (MQ=255)
                                                                                                                      ttttgGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCGCCCGCTCCCACCGGGGATGGTGTTTGGCCCCTACTTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTg                                 <  2:4984325/150‑1 (MQ=255)
                                                                                                                       ttttGTGTGGGTGAGTTTCAGGGGGCTGCTGGGCTGCCCCTTGGCGGGCACGCCGGCACCGTGTGGGGATGGTGTTTTGCACCTACTTCTGTGGCAGCGGGCGCGCCGGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACTGGCTTgg                                <  2:1203435/150‑1 (MQ=255)
                                                                                                                       ttttGTGGTGTTGATTTTCTGGGGGGTGCTGCGCCCCCCCTTGGGGGGCACCCCCGCCCCCACTGGTTTTGTTTTTTTCCACCTCCTTGGGTGGGCGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg                                <  1:124980/150‑1 (MQ=255)
                                                                                                                              gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTaca                         <  2:4192054/150‑1 (MQ=255)
                                                                                                                                  tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccg                     >  2:1340271/1‑150 (MQ=255)
                                                                                                                                     gaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCGCCCACAGGGGATGGTGGTTTGCACCAACTTCGGTGGGAGCGGGCGCGCCCGCCAACGGCCGCCCACCGGCCCCACGGGCGTTACAGGCGTGGCAGGACACcccccg                  >  1:4546098/1‑150 (MQ=255)
                                                                                                                                      aTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCCCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTCCCGGCTTGGCAGTACACCCGCCgg                 >  2:4030778/1‑150 (MQ=255)
                                                                                                                                      aTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCgg                 <  2:4547112/150‑1 (MQ=255)
                                                                                                                                       ttCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCGCTCCCAAAGGGGGTGGTGTTTTGCACCGGCGTGTGTGGGCGGGGGCGCGCCCGCCCACGGCCGCCCAGCGGCCCCAGGGGCGTTTAAGGCTTGGGAGTACAAccgcccgc                >  2:1874639/1‑150 (MQ=255)
                                                                                                                                           gggggCAGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagca            >  2:3258085/1‑150 (MQ=255)
                                                                                                                                           aggggCTGCGCAGCAGCCCCTTCGCGGGGACGCCCGCACCCACAGGGGATGGTGTTTTGCACCTACTTGTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCCCCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagca            >  1:419151/2‑150 (MQ=255)
                                                                                                                                                gggctgcGCCGCCCCTTCGCGGGCACGCCCGCTCCCACTGGGTTTGGTGTTTTGCACCTAGTTCTGTGGGTGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg       <  1:2923630/148‑1 (MQ=255)
                                                                                                                                                 tgctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACGTCGGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCCGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCgg      >  2:3727072/1‑150 (MQ=255)
                                                                                                                                                    tgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa   <  2:2102987/150‑1 (MQ=255)
                                                                                                                                                     gcgcAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAg  <  2:1535495/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCAGAGCCGTAGAAAAGGCCGGTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAG  >  NC_002947/5738879‑5739177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: