Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,739,061 A→C 12.3% intergenic (‑82/+75) proY ← / ← hutH proline (histidine) APC transporter/histidine ammonia‑lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,739,0610AC12.3% 370.9 / 3.6 158intergenic (‑82/+75)proY/hutHproline (histidine) APC transporter/histidine ammonia‑lyase
Reads supporting (aligned to +/- strand):  ref base A (68/60);  new base C (8/16);  total (76/82)
Fisher's exact test for biased strand distribution p-value = 1.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 167 total aligned reads displayed.

GAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTT  >  NC_002947/5738912‑5739209
                                                                                                                                                     |                                                                                                                                                    
gAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                                                      <  1:844112/150‑1 (MQ=255)
 aGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                                                     >  2:1642991/1‑150 (MQ=255)
  gCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                                                    <  1:1510745/150‑1 (MQ=255)
   ccGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAggg                                                                                                                                                   <  2:2623457/150‑1 (MQ=255)
   ccGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAgaa                                                                                                                                                   <  1:2206918/150‑3 (MQ=255)
        ggCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATgg                                                                                                                                              >  1:3713592/1‑150 (MQ=255)
           cATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGgtgt                                                                                                                                           <  1:3076969/150‑1 (MQ=255)
              gacaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTAGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGtttt                                                                                                                                        <  2:4191526/147‑1 (MQ=255)
              gAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGtttt                                                                                                                                        <  2:1674448/150‑1 (MQ=255)
              gAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGtttt                                                                                                                                        <  1:4399728/150‑1 (MQ=255)
              gAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCGCCCCCCGGGGAAGGTGtgtt                                                                                                                                        >  1:5331804/1‑150 (MQ=255)
                aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCGCCCGCACCCACAGGGGAAGGGGGTTTGc                                                                                                                                      >  1:2042219/1‑150 (MQ=255)
                aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGc                                                                                                                                      <  1:1711646/150‑1 (MQ=255)
                aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGc                                                                                                                                      <  2:4397475/150‑1 (MQ=255)
                aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGc                                                                                                                                      <  1:2747062/150‑1 (MQ=255)
                aaCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAAGTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGCTGGTGTTTTGc                                                                                                                                      >  1:828871/1‑150 (MQ=255)
                    gATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCt                                                                                                                                  <  2:4705626/150‑1 (MQ=255)
                     aTGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGGTTTTCAccga                                                                                                                                 >  1:1437636/1‑148 (MQ=255)
                            gggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgt                                                                                                                          <  2:1490543/150‑1 (MQ=255)
                             ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg                                                                                                                         <  2:132551/150‑1 (MQ=255)
                             ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg                                                                                                                         <  2:4438617/150‑1 (MQ=255)
                             ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg                                                                                                                         <  2:570994/150‑1 (MQ=255)
                                aCTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGa                                                                                                                      <  1:5507583/150‑1 (MQ=255)
                                aCTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGa                                                                                                                      <  2:4977126/150‑1 (MQ=255)
                                 cTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAg                                                                                                                     <  1:1927696/150‑1 (MQ=255)
                                   tAGCCCGCGCTCGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCg                                                                                                                   <  2:5141229/150‑1 (MQ=255)
                                    aGCCCGCGCTTGAGACGTTGAGCTTGTTGCATGTCACGTCCTTGATTTTTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCCGCGGCTTCGCGGGCACGACCGCTCCCACAGTGTATGGTGTTTTGCACATACTTCTGTGGGAGCgg                                                                                                                  <  1:1293062/150‑1 (MQ=255)
                                      cccGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCACAGGGGATGGTGGTTTGCACCTACTTCTGTGGgggcgggc                                                                                                                >  1:345886/1‑150 (MQ=255)
                                       ccGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGgcg                                                                                                               <  1:1064407/150‑1 (MQ=255)
                                        cgcgCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGgcgc                                                                                                              <  1:1044444/150‑1 (MQ=255)
                                             ttGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCcg                                                                                                         >  1:1761407/1‑150 (MQ=255)
                                                   ccTTGTGCTTGTTGCATGTCACGTCCTTGATTTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGTTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAgg                                                                                                   <  2:2675787/150‑1 (MQ=255)
                                                     ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGCTGGTGGTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGGAGGgc                                                                                                 >  1:3668043/1‑150 (MQ=255)
                                                     ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCCCCCGCGAAGGgc                                                                                                 >  1:5039335/1‑150 (MQ=255)
                                                     ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCACCCACAGCGGATGGTGTTTTTCACCTACATCTGTGGGATCGGGCGCCCCCGCGAAGGgc                                                                                                 >  1:2209950/1‑150 (MQ=255)
                                                         gCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGgccgcc                                                                                             >  2:5036267/1‑150 (MQ=255)
                                                          cTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCACCCACCCGGGATGGTGTTTTGCACCAACATCGGTGGGAGCGGGCGCGCCCCCCCAGGGcccccc                                                                                            >  1:3626085/1‑150 (MQ=255)
                                                           ttgttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCGCTCCCACAGGGGATGGTGTTTTTCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGCAGGGCCGcccc                                                                                           >  2:665065/1‑149 (MQ=255)
                                                           ttgttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCACAGGGGATTGTGTTTTTCACCTAATTGTTTGGGAGCGGGCGCGCCCCCGAAGGGccccccc                                                                                           >  1:1201726/1‑149 (MQ=255)
                                                              ttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTACCACAGGGGATGGTGTTTTGCACCAACTTCTGGGGGAGCGGGCGCGCCCGCGGACGGCCGccccccg                                                                                        >  1:3159661/1‑146 (MQ=255)
                                                                gCACGTCACGTCCTTGAATTGTGTGTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTACGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGc                                                                                      <  2:4766888/150‑1 (MQ=255)
                                                                       aCGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATTGTGTTTTTCACCTACTTCTGTGGGAGCGGGCGCGCCCCCGAAGGGCCGCCCACCGGCCCCAggg                                                                               >  1:2333710/1‑150 (MQ=255)
                                                                         gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCCCGCCCACACGGGATTGTGTTTTTCCCCAACGTCGGTGGGGGCGGGCGCGCCCCCCCAGGGCCGCCCCCCCGCCCCCCGGGc                                                                             >  1:574724/1‑150 (MQ=255)
                                                                         gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc                                                                             <  2:3714306/150‑1 (MQ=255)
                                                                             ttGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCACCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCCAAGGGCCGCCCAGCGGCCCCAGGGGCGTTa                                                                         >  2:2193868/1‑150 (MQ=255)
                                                                             ttGAATTGTTTTTGTGGTCGTGAGATTAAGGGGGCTGATGCGCAGCCCCTTCGCGCGCACGCACGCACCCAAATGTGATCGTGTTTTGCAACTCCTTCTGTGGGATCGGGCGCCCCCGCGAAGGGCCGCCCAGCGGCCCCACGGCCCTTa                                                                         >  2:5594683/1‑150 (MQ=255)
                                                                             ttGAATTGTTTGTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACACGGGAAGGTGTTTTGCACCTACTTCGGGGGGAGCGGGCCCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTa                                                                         >  2:3655062/1‑150 (MQ=255)
                                                                              tGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                                                    <  2:2087370/74‑1 (MQ=255)
                                                                               gAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCACGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACa                                                                       <  2:2822175/150‑1 (MQ=255)
                                                                               gAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCGCCCACAGGGGCAGGTGTTTTTGAACAACGTATGTGGGCGCCGGCGCGCCCCCGAAGGGCCCCCCACCCGCCCCACGGGccgtaaa                                                                       >  1:2969225/1‑144 (MQ=255)
                                                                                aaTTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCGCCCCCCCACGGGATGGTGTTTTTGAACGAAATAGGTTGGATCGGGCGCGCCCCCCCAGGGCCCCCCCCCCGCCCCCCGGGCggttccg                                                                      >  1:3289802/1‑144 (MQ=255)
                                                                                  ttGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGGGGTGGTGTTTTGCCCCTCCTTCGGTGGGAGCGGGCGCGCCCGCGCAGGGCCGCCCCGCGGCCCCCGGGGCGTTACAGGc                                                                    >  2:3012334/1‑150 (MQ=255)
                                                                                    gTTTTTGGGGTGGTGATATTCTGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTTTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCtt                                                                  <  1:1755450/150‑1 (MQ=39)
                                                                                     tttttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCACCCCCCGGGGATGGGTTTTTTCACCAAAATATGTGGGAGCGGGCGCGCCCGCCAAGGGCCCCCCACCCGCCCCCGGGGCGTTACAGGCGTg                                                                 >  1:2159260/1‑150 (MQ=255)
                                                                                      ttttGTGTGGGTGAGTTTCAGGGGGCTGCTGGGCTGCCCCTTGGCGGGCACGCCGGCACCGTGTGGGGATGGTGTTTTGCACCTACTTCTGTGGCAGCGGGCGCGCCGGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACTGGCTTgg                                                                <  2:1203435/150‑1 (MQ=255)
                                                                                       tttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGGTTTGCACCGACGTCTGGGGGAGCGGGCGCGCCCCCCAAGGGCCGCCCAGCGGCCCCAGGGGCGGTACCGGCTTGGc                                                               >  2:4268508/1‑150 (MQ=38)
                                                                                             gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTaca                                                         <  2:4192054/150‑1 (MQ=255)
                                                                                              tCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCACCCACAGGGGATGGTGTTTTGCACCAAAATCGGTGGGAGCGGGCGCCCCCGCCAAGGGCCCCCCACCCGCCCCCGGGGCGGTACAGGCTTTGCACTacac                                                        >  1:393890/1‑150 (MQ=255)
                                                                                                 tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccg                                                     >  2:1340271/1‑150 (MQ=255)
                                                                                                 tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccg                                                     >  2:3682845/1‑150 (MQ=255)
                                                                                                     aTTCTGGGGGCGGCGGCGCCGCCCCTGCGCGGGCACGCCCGCGCCCCCCGGGGATGGTGTTGTCCACCTACTTCTGGGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCgg                                                 <  1:2710113/150‑1 (MQ=255)
                                                                                                     aTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCCCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTCCCGGCTTGGCAGTACACCCGCCgg                                                 >  2:4030778/1‑150 (MQ=255)
                                                                                                     aTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCgg                                                 <  2:4547112/150‑1 (MQ=255)
                                                                                                          gggggCAGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagca                                            >  2:3258085/1‑150 (MQ=255)
                                                                                                          aggggCTGCGCAGCAGCCCCTTCGCGGGGACGCCCGCACCCACAGGGGATGGTGTTTTGCACCTACTTGTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCCCCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagca                                            >  1:419151/2‑150 (MQ=255)
                                                                                                            gggCTGCGCAGCAGCCCCTTCGCGGGCACCCCCCCGCCCACCGGGGATGGTGTTTTGCACCTACGTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCCGCGGCCCCACGGGCGGTTCCGGCGTGGCCGTTCACCCCCCCgccgcacg                                          >  2:499569/1‑148 (MQ=255)
                                                                                                             ggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCGGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGc                                         <  2:1853131/150‑1 (MQ=255)
                                                                                                               gggctgcGCCGCCCCTTCGCGGGCACGCCCGCTCCCACTGGGTTTGGTGTTTTGCACCTAGTTCTGTGGGTGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg                                       <  1:2923630/148‑1 (MQ=255)
                                                                                                               ctgctgCGCAGCCCCTGCGCGGGCACGCCCGCTCCCCCAGGGGATGGTGTTTTGCACCTACGTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg                                       <  2:104454/150‑1 (MQ=255)
                                                                                                                   tgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                   <  2:2102987/150‑1 (MQ=255)
                                                                                                                    gcgcAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAg                                  <  2:1535459/150‑1 (MQ=255)
                                                                                                                    gcgcAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGTTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAg                                  <  2:3510760/150‑1 (MQ=255)
                                                                                                                         gCCCCTGCGCGGGCACGCCCGCTCCCCCCGGGTTTGGTTTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAc                             <  2:1935570/150‑1 (MQ=39)
                                                                                                                              ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg                        >  1:1348975/1‑150 (MQ=255)
                                                                                                                               tCGGGGGCCCGCCCGCGCCCCCTGGGGTTGGTGTTTTGCACCTACTTCTGGGGGCGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTgg                       <  1:5246177/150‑1 (MQ=255)
                                                                                                                                cggggccACCCCCGCTCCCCCCGGGGTTGGTTTTTTGCACCTAGTTGTGGGGTGGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACGGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGc                      <  1:1456115/144‑1 (MQ=255)
                                                                                                                                 gcgGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGcc                     >  2:1686457/1‑150 (MQ=255)
                                                                                                                                   gggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCCGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa                   >  1:5398674/1‑150 (MQ=255)
                                                                                                                                   gggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa                   >  2:2979472/1‑150 (MQ=255)
                                                                                                                                    ggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAAc                  <  2:3137972/150‑1 (MQ=255)
                                                                                                                                    ggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAAc                  >  2:5855/1‑150 (MQ=255)
                                                                                                                                     gCACGCCCGCTCCCACAGGGGTTGGTTTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa                 <  2:1079916/150‑1 (MQ=255)
                                                                                                                                     gCACGCCCGCTCCCACAGGGGTTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa                 <  2:3801611/150‑1 (MQ=255)
                                                                                                                                     ccACGCCCGCTCCCACAGGGGATGTTTTTTTGCACAAACTTCTTTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa                 <  1:741328/149‑1 (MQ=255)
                                                                                                                                      cACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAg                <  2:5331804/150‑1 (MQ=255)
                                                                                                                                       aCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACatc               >  1:4521951/1‑148 (MQ=255)
                                                                                                                                        cGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGt              >  1:4602565/1‑150 (MQ=255)
                                                                                                                                           cggCTCCCCCTGGGTATGGGGTTTGGCCCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCa           <  1:3621873/148‑1 (MQ=255)
                                                                                                                                           ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCa           >  1:2298079/1‑150 (MQ=255)
                                                                                                                                           ccGCTCCCACAGGGGAGGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCa           <  2:828871/150‑1 (MQ=255)
                                                                                                                                               tCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGc       >  1:567967/1‑150 (MQ=255)
                                                                                                                                                ccccCAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGcc      <  1:1834290/150‑1 (MQ=255)
                                                                                                                                                 ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCACGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCt     >  2:325898/1‑150 (MQ=255)
                                                                                                                                                 ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCt     >  1:4451482/1‑150 (MQ=255)
                                                                                                                                                 ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCt     >  1:5595897/1‑150 (MQ=255)
                                                                                                                                                  cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtt    >  2:3857991/1‑150 (MQ=255)
                                                                                                                                                  cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtt    >  2:2381183/1‑150 (MQ=255)
                                                                                                                                                   acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCttt   >  2:5414139/1‑150 (MQ=255)
                                                                                                                                                   acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCttt   >  2:1526555/1‑150 (MQ=255)
                                                                                                                                                    caGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt  >  2:2558485/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTT  >  NC_002947/5738912‑5739209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: