Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,746,906 G→C 5.1% R85G (CGC→GGC) ‡ PP_5039 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,746,9060GC 5.1% 775.8 / 21.7 228R85G (CGC→GGC) ‡PP_5039hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (120/96);  new base C (6/5);  total (127/101)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01

Only 100 of 238 total aligned reads displayed.

ACGCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCGTCGGCA  >  NC_002947/5746758‑5747051
                                                                                                                                                    |                                                                                                                                                 
aCGCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGgcgcgc                                                                                                                                                  >  2:1616017/1‑150 (MQ=255)
 cGCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGcgcgcg                                                                                                                                                 <  1:1000936/150‑1 (MQ=255)
 cGCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGcgcgcg                                                                                                                                                 <  2:5116797/150‑1 (MQ=255)
  gCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCgcgg                                                                                                                                                >  1:2554690/1‑150 (MQ=255)
  gCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCgcgg                                                                                                                                                >  1:1869557/1‑150 (MQ=255)
     caGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCgt                                                                                                                                             <  1:832803/150‑1 (MQ=255)
       ggTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGCGCGCCTTCGAGGGCGACCGGCgtgc                                                                                                                                           <  2:791019/150‑2 (MQ=255)
            tGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCgg                                                                                                                                      <  1:3508199/150‑1 (MQ=255)
            tGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCgg                                                                                                                                      <  1:686798/150‑1 (MQ=255)
            tGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCgg                                                                                                                                      <  1:4694386/150‑1 (MQ=255)
              ccAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTa                                                                                                                                    <  2:5351495/150‑1 (MQ=255)
                aGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGa                                                                                                                                  >  1:2070061/1‑150 (MQ=255)
                aGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGa                                                                                                                                  <  2:2949909/150‑1 (MQ=255)
                aGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGCGTCGCGGTAGa                                                                                                                                  >  2:4268639/1‑150 (MQ=255)
                    cAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCAt                                                                                                                              <  2:4805317/150‑1 (MQ=255)
                     aGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATg                                                                                                                             >  1:3460277/1‑150 (MQ=255)
                      gCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGc                                                                                                                            >  1:3635569/1‑150 (MQ=255)
                        aCTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGt                                                                                                                          <  1:4381958/150‑1 (MQ=255)
                           tCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGc                                                                                                                       <  2:3874471/150‑1 (MQ=255)
                              gCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGc                                                                                                                    <  1:3258101/150‑1 (MQ=255)
                                   cTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTc                                                                                                               <  2:368845/150‑1 (MQ=255)
                                    tCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCg                                                                                                              >  2:299272/1‑150 (MQ=255)
                                     ccAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCCGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGa                                                                                                             <  2:1275115/150‑1 (MQ=255)
                                          aCCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCaaa                                                                                                        <  1:5196304/150‑1 (MQ=255)
                                           ccAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCaaaa                                                                                                       <  2:4782155/150‑1 (MQ=255)
                                            cagcagCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAAt                                                                                                      >  2:4134187/1‑150 (MQ=255)
                                                agcaCGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATcagc                                                                                                  <  2:5062519/150‑1 (MQ=255)
                                                 gcaCGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATcagca                                                                                                 <  1:322123/150‑1 (MQ=255)
                                                 gcaCGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATcagca                                                                                                 >  1:3994301/1‑150 (MQ=255)
                                                   aCGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAgg                                                                                               >  1:3532620/1‑150 (MQ=255)
                                                    cGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGc                                                                                              >  1:1620179/1‑150 (MQ=255)
                                                      aaCACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGccc                                                                                            >  2:3005365/1‑150 (MQ=255)
                                                       acacGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCcca                                                                                           >  1:4934844/1‑150 (MQ=255)
                                                       acacGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCcca                                                                                           >  1:1583145/1‑150 (MQ=255)
                                                       acacGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCcca                                                                                           >  1:2977147/1‑150 (MQ=255)
                                                         acGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCccagc                                                                                         >  2:185054/1‑150 (MQ=255)
                                                          cgcgCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCccagcc                                                                                        >  2:3998879/1‑150 (MQ=255)
                                                                   tCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCg                                                                               >  2:2272043/1‑150 (MQ=255)
                                                                   tCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCg                                                                               >  2:3533232/1‑150 (MQ=255)
                                                                   tCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCg                                                                               <  1:3589973/150‑1 (MQ=255)
                                                                   tCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCg                                                                               <  1:2394518/150‑1 (MQ=255)
                                                                   tCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCg                                                                               >  1:2209293/1‑150 (MQ=255)
                                                                   tCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAAACAGCAGGCCCAGCCAGCCCTGCg                                                                               >  2:5048515/1‑150 (MQ=255)
                                                                    cGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATc                                                                                                     >  2:3816622/1‑127 (MQ=255)
                                                                    cGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATc                                                                                                     <  1:3816622/127‑1 (MQ=255)
                                                                     ggCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCggg                                                                             <  2:1525333/150‑1 (MQ=255)
                                                                     ggCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCggg                                                                             <  1:1110349/150‑1 (MQ=255)
                                                                      gcagcaGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCgggg                                                                            >  1:5151318/1‑150 (MQ=255)
                                                                                gTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCa                                                                  >  2:3651996/1‑150 (MQ=255)
                                                                                    tCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCActct                                                              >  2:2175384/1‑150 (MQ=255)
                                                                                     cccAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCtt                                                             <  1:1064886/150‑1 (MQ=255)
                                                                                      ccAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTc                                                            <  2:3317150/150‑1 (MQ=255)
                                                                                      ccAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGGAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTc                                                            >  1:180848/1‑150 (MQ=255)
                                                                                       cAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCg                                                           >  1:4334612/1‑150 (MQ=255)
                                                                                       cAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGAGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTATGCTGCCACTCTTCg                                                           >  2:4672139/1‑150 (MQ=255)
                                                                                             ttCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCa                                                     >  1:5301829/1‑150 (MQ=255)
                                                                                             ttCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCa                                                     >  1:3758824/1‑150 (MQ=255)
                                                                                                tGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCAccc                                                  >  1:2790391/1‑150 (MQ=255)
                                                                                                  cAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGc                                                >  1:5576068/1‑150 (MQ=255)
                                                                                                  cAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGc                                                >  2:139844/1‑150 (MQ=255)
                                                                                                   aGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCCCTCTTCGAGCCCACCCGcc                                               >  1:677896/1‑150 (MQ=255)
                                                                                                   aGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGcc                                               >  1:4328169/1‑150 (MQ=255)
                                                                                                    ggCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCa                                              <  1:307741/150‑1 (MQ=255)
                                                                                                    ggCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCa                                              <  2:1176997/150‑1 (MQ=255)
                                                                                                      cccTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAgg                                            <  2:2473926/150‑1 (MQ=255)
                                                                                                       ccTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAggg                                           >  1:2134594/1‑150 (MQ=255)
                                                                                                       ccTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAggg                                           >  1:4965490/1‑150 (MQ=255)
                                                                                                          gCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGt                                        <  2:3221028/150‑1 (MQ=255)
                                                                                                          gCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGt                                        <  1:5385815/150‑1 (MQ=255)
                                                                                                            aTGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGc                                      <  1:57144/150‑1 (MQ=255)
                                                                                                             tGGCGACCACCCGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCt                                     >  2:3659128/1‑150 (MQ=255)
                                                                                                              ggCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTc                                    <  1:1418139/150‑1 (MQ=255)
                                                                                                              ggCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTc                                    <  1:3664617/150‑1 (MQ=255)
                                                                                                               gCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCg                                   >  2:1906625/1‑150 (MQ=255)
                                                                                                                     accTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAgg                             >  1:1783033/1‑150 (MQ=255)
                                                                                                                      ccTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGt                            >  1:1340916/1‑150 (MQ=255)
                                                                                                                       cTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTc                           <  1:2280385/150‑1 (MQ=255)
                                                                                                                        tGGGCACGCCGGTCGCCCTCGAATGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTAGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCg                          >  2:2733795/1‑150 (MQ=255)
                                                                                                                          ggCACGCCGGTCGCCCTCGCAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCCGCCAGCCCTGCGGGGTTTTCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGcc                        <  2:4962475/150‑1 (MQ=255)
                                                                                                                          ggCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGcc                        <  2:4934844/150‑1 (MQ=255)
                                                                                                                            cACGCCGCGAGCCTTCGAGGGCGAACGGAGTGTCGCGGAAGAACGTGCGTGGCAGCAGTTCGAGCAAAATCAGCAGGCACAGACAGCCCTGCGGGGTAAGCTGCCACACTTCTAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCaa                      >  2:3145033/1‑150 (MQ=255)
                                                                                                                               gCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACa                   >  1:1157726/1‑150 (MQ=255)
                                                                                                                               gCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACa                   >  2:5586774/1‑150 (MQ=255)
                                                                                                                               gCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACa                   >  2:1640773/1‑150 (MQ=255)
                                                                                                                               gCCGGTCGCCCTCGAAGGCGCGCGGCGCGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACa                   <  1:4268639/150‑1 (MQ=255)
                                                                                                                                  ggTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAgcg                >  2:830231/1‑150 (MQ=255)
                                                                                                                                   gTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAgcgc               >  2:4479316/1‑150 (MQ=255)
                                                                                                                                    gcGCCTTCGAGGGCGACCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCa              >  2:1098676/2‑150 (MQ=255)
                                                                                                                                      gCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCaa                      <  2:5158791/140‑1 (MQ=255)
                                                                                                                                      gCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATg            <  1:4198149/150‑1 (MQ=255)
                                                                                                                                      gCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATg            <  1:4324075/150‑1 (MQ=255)
                                                                                                                                       cccTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATgg           <  2:2670279/150‑1 (MQ=255)
                                                                                                                                        ccTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATggg          >  1:3100308/1‑150 (MQ=255)
                                                                                                                                        ccTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATggg          >  2:5236731/1‑150 (MQ=255)
                                                                                                                                          tCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCg        >  1:338714/1‑150 (MQ=255)
                                                                                                                                          tCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCg        >  1:4831889/1‑150 (MQ=255)
                                                                                                                                          tCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCg        >  1:921532/1‑150 (MQ=255)
                                                                                                                                           cagcaaggcgcgGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAATATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCGt       >  2:856988/8‑150 (MQ=255)
                                                                                                                                           cGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCGt       <  2:718298/150‑1 (MQ=255)
                                                                                                                                            gAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCGTc      >  1:4136365/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
ACGCACAGGTTCTGCCAGTCCAGCACTTCGGCATGCTCCAGTACCAGCAGCACGAACACGCGCTGGATCGGCAGCAGCTGGTAGTCCCAGCCCTTCTGCAGGCCCTGCATGGCGACCACCTGGGCACGCCGGTCGCCCTCGAAGGCGCGCGGCGTGTCGCGGTAGATCATGCGTGGCAGCTGGTCGAGCAAAATCAGCAGGCCCAGCCAGCCCTGCGGGGTTTGCTGCCACTCTTCGAGCCCACCCGCCAGGGCGTGCTCGACCAGGTCGCCAAACAGCGCATGGGCGTCGGCA  >  NC_002947/5746758‑5747051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑