Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 81,033 | C→A | 5.8% | intergenic (+90/‑44) | tsaC → / → PP_5425 | threonylcarbamoyl‑AMP synthase/hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 81,033 | 0 | C | A | 5.8% | 839.4 / 26.4 | 249 | intergenic (+90/‑44) | tsaC/PP_5425 | threonylcarbamoyl‑AMP synthase/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base C (135/99); new base A (10/5); total (145/104) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.95e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 251 total aligned reads displayed.
CGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCT > NC_002947/80884‑81180 | cggAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTc < 1:51053/150‑1 (MQ=255) aagaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGcc < 1:40617/150‑1 (MQ=255) aagaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGcc < 1:1530975/150‑1 (MQ=255) agaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGccc > 2:2001316/1‑150 (MQ=255) agaaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAAATCGGTGCCAGGCACGGGCTTCGccc < 2:105072/150‑1 (MQ=255) aaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt < 1:1071815/150‑1 (MQ=255) aaCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt < 2:5431012/150‑1 (MQ=255) aCCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgtg > 2:1796066/1‑150 (MQ=255) cccGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgtgt > 1:1742398/1‑150 (MQ=255) cccGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgc < 2:1940135/150‑2 (MQ=255) cccGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGGTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgc < 2:3907288/150‑2 (MQ=255) cGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgcct < 1:3402001/150‑4 (MQ=255) gAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcg > 1:1379246/1‑150 (MQ=255) gAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcg > 1:1459514/1‑150 (MQ=255) gAGTGTGATGCGCGACCTGGCAACCGGCGACGTCGTTCGCCCGGGTTGATACCACTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGACACGGGCGAAGCCCgtgcctg < 2:3550368/150‑5 (MQ=255) gtgtGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTcgcg < 1:3749512/150‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCGTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg < 2:3419724/150‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt < 1:4796996/142‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg < 2:927776/150‑1 (MQ=255) tgtgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg < 2:1111349/150‑1 (MQ=255) gATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCa > 2:2331979/1‑150 (MQ=255) tCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGACGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGc < 2:5459015/150‑1 (MQ=255) gcgACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGccc < 2:2111154/150‑1 (MQ=255) gCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATCCAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGcgaacac < 2:1680385/150‑7 (MQ=255) gCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGa > 1:4676426/1‑150 (MQ=255) gCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAAGCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGcgaacac < 2:1681224/150‑7 (MQ=255) aaCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGaaa < 1:126558/150‑1 (MQ=255) aaCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGaaa < 1:2282333/150‑1 (MQ=255) ccGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAgt < 2:2262528/150‑1 (MQ=255) cGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAgtg < 2:1258213/150‑1 (MQ=255) gAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCAc > 2:2070840/1‑150 (MQ=255) cGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGcaca < 1:84231/150‑1 (MQ=255) gTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCAAGCACAt > 2:702049/1‑150 (MQ=255) tCGCCCGGGTTGATACCACTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGa < 2:3011858/150‑1 (MQ=255) tCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGa < 2:3960594/150‑1 (MQ=255) tCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGa < 2:2619051/150‑1 (MQ=255) cccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTg < 1:1875354/150‑1 (MQ=255) ccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGc > 1:304177/1‑150 (MQ=255) ccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACAGGACTGc > 1:2357449/1‑150 (MQ=255) cGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGcc > 1:3789141/1‑150 (MQ=255) gTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCtt > 2:5417428/1‑150 (MQ=255) tGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCGTCg > 1:1597323/1‑150 (MQ=255) gATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgc < 1:5597557/150‑1 (MQ=255) gATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGGTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgc > 2:2354048/1‑150 (MQ=255) agaCCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCGTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgca < 2:4235998/148‑1 (MQ=255) cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCCGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGCAAGTGTCACGCACCGGACTGCCCTTCGCAGCAc > 2:3329428/1‑150 (MQ=255) cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCAc > 1:4539301/1‑150 (MQ=255) aaTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGCACGTGTCACGCACATGACTGCCCTTCGCAGCACg > 1:3321152/1‑150 (MQ=255) aTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGt > 2:3999458/1‑150 (MQ=255) tCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGtt < 2:3613749/150‑1 (MQ=255) ccACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGttt < 2:529141/150‑1 (MQ=255) acaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGCCTGCCCTTCGCCGCACGTTTgg > 1:3897863/1‑150 (MQ=255) acaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCGTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTgg > 2:5130140/1‑150 (MQ=255) aGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTc > 2:3817074/1‑150 (MQ=255) aGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTc > 2:4063860/1‑150 (MQ=255) cTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCga < 1:3159428/150‑1 (MQ=255) cTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCga < 1:4316094/150‑1 (MQ=255) ggCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCATTCGCAGCACGTTTGGTCGCgatg > 1:4411879/1‑150 (MQ=255) tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGatgatg > 2:5157581/1‑150 (MQ=255) tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGGTTGGTCGCGatgatg > 1:5299941/1‑150 (MQ=255) cGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGACAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATgg > 2:763521/1‑150 (MQ=255) gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTa < 1:3870714/150‑1 (MQ=255) gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTa < 1:244720/150‑1 (MQ=255) cTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATg < 1:4983397/150‑1 (MQ=255) ggCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGtca > 2:3157479/1‑148 (MQ=255) ccTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACCTGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAg > 2:479412/1‑150 (MQ=255) tgGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTACCGAGGTCt > 2:4895418/1‑150 (MQ=255) GGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTc > 2:3387227‑M1/1‑150 (MQ=255) GGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTc < 1:5419435‑M1/150‑1 (MQ=255) GGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTc > 1:928687‑M1/1‑150 (MQ=255) GAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCg < 1:1795234‑M1/150‑1 (MQ=255) AGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGa > 1:5058541‑M1/1‑150 (MQ=255) AGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGa > 2:4691501‑M1/1‑150 (MQ=255) GCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGAt > 2:154197‑M1/1‑150 (MQ=255) GCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGAt > 2:850779‑M1/1‑150 (MQ=255) GCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAgg > 1:4281015‑M1/1‑150 (MQ=255) ccGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttt > 2:3748468/1‑150 (MQ=255) ccGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttt > 2:3734485/1‑150 (MQ=255) cgAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTg > 1:2568026/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 1:2131865/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa < 2:557604/150‑1 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 1:720283/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 2:4228222/1‑150 (MQ=255) gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGa > 1:237807/1‑150 (MQ=255) aTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGa < 2:4678364/150‑1 (MQ=255) tACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGAc > 2:2658852/1‑150 (MQ=255) tACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGAc > 1:4938681/1‑150 (MQ=255) aaCTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGc > 1:3750321/1‑150 (MQ=255) tCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCg > 1:1963569/1‑150 (MQ=255) ccgcgaacACGGGCGAAGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAg > 2:4659609/8‑150 (MQ=255) ccgcgaacACGGGCGAAGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAg > 1:2870113/8‑150 (MQ=255) gCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGc > 1:5353172/1‑150 (MQ=255) ccAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCTATTTTTGAACTGACGGCCCGCAAGcc > 1:2783313/1‑150 (MQ=255) gaacACGGGCGAAGCCCGAGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTGTGGTCGCGATGATGGCTATGGTAACGAGGGCTTCGATGAGGCGATTTTTGACCTGACGGCCCGCAAGCCCa > 2:1474735/4‑150 (MQ=255) aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAttttt < 1:856605/128‑1 (MQ=255) aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCa > 2:4581046/1‑150 (MQ=255) acACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAg > 1:4529079/2‑150 (MQ=255) acACGGGCGAAGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAg > 2:3285048/2‑150 (MQ=255) cACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAgg < 2:412634/150‑1 (MQ=255) gCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCagag > 1:4369338/1‑150 (MQ=255) | CGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCT > NC_002947/80884‑81180 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |