BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,794,027	G→C	5.5%	C60S (TGC→TCC) ‡	ynfM →	efflux transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,794,027	0	G	C	5.5%	743.3 / 24.4	219	C60S (TGC→TCC) ‡	ynfM	efflux transporter
Reads supporting (aligned to +/- strand): ref base G (118/89); new base C (9/3); total (127/92)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01

Only 100 of 224 total aligned reads displayed.

GCCCGTGAAAACTGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCAAGCCCGTGA  >  NC_002947/5793878‑5794176

gcccgTGAAAACTGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTg                                                                                                                                                       >  2:230168/1‑150 (MQ=255)

gcccgTGAAAACTGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTg                                                                                                                                                       <  2:1322248/150‑1 (MQ=255)

 cccgTGAAAACTGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGc                                                                                                                                                      <  2:4505673/150‑1 (MQ=255)

            tGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCgat                                                                                                                                           >  1:4922700/1‑150 (MQ=255)

            tGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCgat                                                                                                                                           >  1:3293567/1‑150 (MQ=255)

            tGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCgat                                                                                                                                           >  2:4929295/1‑150 (MQ=255)

              cAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCgatga                                                                                                                                         <  2:1220413/150‑1 (MQ=255)

               aGTAGCCCCCCTCCTCCTTGAGCCAAAACCAGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCgatgat                                                                                                                                        <  2:5627979/150‑1 (MQ=255)

                gTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGatgatg                                                                                                                                       >  2:5183843/1‑150 (MQ=255)

                gTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGatgatg                                                                                                                                       >  1:2928576/1‑150 (MQ=255)

                 tAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGc                                                                                                                                      <  2:1955949/150‑1 (MQ=255)

                 tAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGc                                                                                                                                      >  1:4424330/1‑150 (MQ=255)

                 tAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGc                                                                                                                                      >  1:4424387/1‑150 (MQ=255)

                 tAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGc                                                                                                                                      <  2:375/150‑1 (MQ=255)

                  aGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGcc                                                                                                                                     <  1:4625697/150‑1 (MQ=255)

                    ccccccTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCctc                                                                                                                                   >  2:1835898/1‑150 (MQ=255)

                    ccccccTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCctc                                                                                                                                   <  1:99761/150‑1 (MQ=255)

                     cccccTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCctct                                                                                                                                  >  2:1646848/1‑150 (MQ=255)

                       cccTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTctgc                                                                                                                                >  1:1874468/1‑150 (MQ=255)

                       cccTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTctgc                                                                                                                                <  1:3938486/150‑1 (MQ=255)

                           cctcctTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTc                                                                                                                            >  1:2358155/1‑150 (MQ=255)

                            ctcctTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTcc                                                                                                                           <  1:2496043/150‑1 (MQ=255)

                             tcctTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTccc                                                                                                                          >  1:5610062/1‑150 (MQ=255)

                               ctTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCgg                                                                                                                        >  1:3585147/1‑150 (MQ=255)

                               ctTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCgg                                                                                                                        >  1:3496576/1‑150 (MQ=255)

                                ttGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCggg                                                                                                                       <  1:274244/150‑1 (MQ=255)

                                 tGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGa                                                                                                                      <  1:1257575/150‑1 (MQ=255)

                                   aGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGt                                                                                                                    <  1:3264095/150‑1 (MQ=255)

                                    gCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGtt                                                                                                                   >  1:615889/1‑150 (MQ=255)

                                     ccAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGttt                                                                                                                  <  2:3010562/150‑1 (MQ=255)

                                     ccAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGttt                                                                                                                  >  1:5385304/1‑150 (MQ=255)

                                     ccAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGttt                                                                                                                  >  1:5129371/1‑150 (MQ=255)

                                     ccAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGttt                                                                                                                  <  2:3010610/150‑1 (MQ=255)

                                     ccAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGttt                                                                                                                  >  2:5588829/1‑150 (MQ=255)

                                     ccAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGttt                                                                                                                  >  1:3143802/1‑150 (MQ=255)

                                      cAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTg                                                                                                                 >  1:4030100/1‑150 (MQ=255)

                                      cAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTg                                                                                                                 >  1:256433/1‑150 (MQ=255)

                                      cAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTg                                                                                                                 >  1:787036/1‑150 (MQ=255)

                                       aaaaCCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGc                                                                                                                >  1:3912366/1‑150 (MQ=255)

                                       aaaaCCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGc                                                                                                                >  2:1962964/1‑150 (MQ=255)

                                       aaaaCCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGc                                                                                                                >  2:311264/1‑150 (MQ=255)

                                       aaaaCCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGc                                                                                                                >  2:529788/1‑150 (MQ=255)

                                                     tGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGcac                                                                                                  >  1:3073633/1‑150 (MQ=255)

                                                     tGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGcac                                                                                                  >  1:3197595/1‑150 (MQ=255)

                                                         cGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACagag                                                                                              >  1:3101344/1‑150 (MQ=255)

                                                         cGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACagag                                                                                              >  1:5553770/1‑150 (MQ=255)

                                                          gAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGagc                                                                                             >  2:4365074/1‑150 (MQ=255)

                                                           aaaTGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGagca                                                                                            <  1:1835898/150‑1 (MQ=255)

                                                                  gATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGt                                                                                     >  1:325098/1‑150 (MQ=255)

                                                                  gATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGt                                                                                     <  1:5588829/150‑1 (MQ=255)

                                                                     cGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCt                                                                                  >  2:3364904/1‑150 (MQ=255)

                                                                     cGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCt                                                                                  <  2:2457723/150‑1 (MQ=255)

                                                                       aaaaaGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACaga                                                                                               <  1:3045618/135‑1 (MQ=255)

                                                                       aaaaaGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGt                                                                                >  1:5395172/1‑150 (MQ=255)

                                                                         aaaGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCg                                                                              >  1:5325312/1‑150 (MQ=255)

                                                                           aGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGgt                                                                            <  1:5530461/150‑1 (MQ=255)

                                                                           aGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGgt                                                                            <  1:1458614/150‑1 (MQ=255)

                                                                              cacaCCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTc                                                                         <  2:5237529/150‑1 (MQ=255)

                                                                              cacaCCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTc                                                                         <  1:1962436/150‑1 (MQ=255)

                                                                                   ccGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCg                                                                    >  2:3041882/1‑150 (MQ=255)

                                                                                   ccGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCg                                                                    >  1:2510761/1‑150 (MQ=255)

                                                                                         tCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGc                                                              <  1:2465157/150‑1 (MQ=255)

                                                                                           aTGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTg                                                            <  1:5069856/150‑1 (MQ=255)

                                                                                           aTGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTg                                                            <  1:3649459/150‑1 (MQ=255)

                                                                                                  ccGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCg                                                     <  2:4710773/150‑1 (MQ=255)

                                                                                                     tGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAACAGCCTGGt                                                                                     >  2:1434371/1‑115 (MQ=255)

                                                                                                       cTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCctg                                                <  1:4286619/150‑1 (MQ=255)

                                                                                                        tGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCATAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCctgc                                               >  1:1412950/1‑150 (MQ=255)

                                                                                                           ccTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGa                                            <  2:2358155/150‑1 (MQ=255)

                                                                                                            cTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTc                                                                         <  2:3859108/120‑1 (MQ=255)

                                                                                                            cTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGAt                                           >  1:5615686/1‑150 (MQ=255)

                                                                                                            cTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTCTCCACCGCCATGCTGGCGTTCGGCCTGCTGAt                                           >  2:5538816/1‑150 (MQ=255)

                                                                                                             ttGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATc                                          >  2:75966/1‑150 (MQ=255)

                                                                                                                ttCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCAcc                                       >  2:3939034/1‑150 (MQ=255)

                                                                                                                   aGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGc                                    <  1:3174252/150‑1 (MQ=255)

                                                                                                                   aGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTCGCCATCAACGCGGcaca                                                                                                 <  1:4568153/89‑1 (MQ=255)

                                                                                                                    gcggcgGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGcc                                   >  2:4835892/1‑150 (MQ=255)

                                                                                                                     cggcggTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGccc                                  >  1:1294056/1‑150 (MQ=255)

                                                                                                                         ggTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCAtt                              >  2:2119549/1‑150 (MQ=255)

                                                                                                                              cGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGa                         <  2:1346368/150‑1 (MQ=255)

                                                                                                                              cGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGa                         <  2:1119465/150‑1 (MQ=255)

                                                                                                                               gCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGAc                        >  1:2846000/1‑150 (MQ=255)

                                                                                                                               gCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGAc                        >  2:3747396/1‑150 (MQ=255)

                                                                                                                                  aCCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGc                     >  1:2744890/1‑150 (MQ=255)

                                                                                                                                    cTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCAt                   >  1:3701313/1‑150 (MQ=255)

                                                                                                                                     ttCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATc                  >  2:4682572/1‑150 (MQ=255)

                                                                                                                                      atcatcggCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCg                 >  2:3297337/8‑150 (MQ=255)

                                                                                                                                         ccTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGAc              <  1:1091236/150‑1 (MQ=255)

                                                                                                                                          tcggCTGTACGCAGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATGTCTGACCGCATCGGACg             >  2:5373749/4‑150 (MQ=255)

                                                                                                                                          cTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACg             >  2:27359/1‑150 (MQ=255)

                                                                                                                                            ggCTGTACGCAGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCa           >  2:318424/2‑150 (MQ=255)

                                                                                                                                            ggCTGTACGCAGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCa           >  1:2980873/2‑150 (MQ=255)

                                                                                                                                             gCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCaa          <  1:2009120/150‑1 (MQ=255)

                                                                                                                                             gCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCaa          >  2:3139175/1‑150 (MQ=255)

                                                                                                                                             gCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCaa          <  1:5198901/150‑1 (MQ=255)

                                                                                                                                             gCTGTACGCAGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCac          >  1:2877165/1‑149 (MQ=255)

                                                                                                                                                gTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCAAGcc       >  1:2273896/1‑150 (MQ=255)

                                                                                                                                                 tACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCAAGccc      >  2:4084582/1‑150 (MQ=255)

                                                                                                                                                   cTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCAAGCCCGt    <  2:4456729/150‑1 (MQ=255)

                                                                                                                                                    tGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCAAGCCCGTg   >  1:4789466/1‑150 (MQ=255)

GCCCGTGAAAACTGCAGTAGCCCCCCTCCTCCTTGAGCCAAAACCTGCCATCCTGACCGAAATGTGGATCGAAAAAGGCACACCCGCCTTCATGAAAACCGTGCTGGCCTTGTTCAGCGGCGGTTTCGCCACCTTCGCCTTGCTGTACTGCGTACAGCCGATGATGCCTCTGCTGTCCCGGGAGTTTGCCATCAACGCGGCACAGAGCAGCCTGGTGCTGTCGGTGTCCACCGCCATGCTGGCGTTCGGCCTGCTGATCACCGGCCCCATTTCTGACCGCATCGGACGCAAGCCCGTGA  >  NC_002947/5793878‑5794176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`