| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,863,910 | T→A | 10.2% | intergenic (+83/+55) | PP_5134 → / ← PP_5135 | hypothetical protein/ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,863,910 | 0 | T | A | 10.2% | 350.1 / 5.2 | 128 | intergenic (+83/+55) | PP_5134/PP_5135 | hypothetical protein/ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (87/21); new base A (8/5); total (97/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACAAAGTCGT > NC_002947/5863766‑5864059 | ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCCCCAATCCGGcgta < 2:5563922‑M2/150‑5 (MQ=255) ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgta > 1:4882490‑M2/1‑146 (MQ=255) ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgta > 2:3911577‑M2/1‑146 (MQ=255) ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACCCCTCCTACGGGCGGCCTTTGTTAAACCACCCAGG‑TGCGTCCA‑CCACCAAAACGGcgga < 2:1976726‑M2/150‑5 (MQ=255) cAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtag > 1:1142915‑M2/1‑145 (MQ=255) cAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtag > 2:1624117‑M2/1‑145 (MQ=255) aaGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACCGCTCCTACGGGCGGCCGTTGTACAACCACCCATG‑TGCGGCCA‑CCACCAATCCGGcgtagg < 2:1760581‑M2/150‑7 (MQ=255) aaGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTATTCGCGGGTAAACCCCCGCCTACGGGCGGCCGTTGTAAAACCCACCAAG‑TGCGTCCA‑CCACCAAACCCCcgtagg < 2:1984395‑M2/150‑7 (MQ=255) cTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagc > 1:5421033‑M2/1‑141 (MQ=255) gAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgg > 1:4143804‑M2/1‑139 (MQ=255) gCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTTAAACCCCGCCGACGGGCGGCCCTTGTAAAAACACCCCTG‑TGGGTCCA‑CCACCAAACCCGcggaggagcgggtttacc < 2:1563204‑M2/150‑19 (MQ=255) gCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacc > 1:1887581‑M2/1‑132 (MQ=255) gCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacc > 2:2450413‑M2/1‑132 (MQ=255) gCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACCCCGCCAAACGGCGGCCGTTTTACAACCACCCAAT‑TGCGTACA‑CCACCAAAACCGCGGAGGAGCGGGTTTaac > 2:1562631/1‑148 (MQ=255) cTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAGACCCGCGCCGACCGGCGGCCTGTGTGCAAACACCCAGG‑GGCGTGCA‑CCACCCAACCCGCGGAGGCGCGGGgttgacc > 1:4556860/1‑146 (MQ=255) gAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacccgc > 2:2952549‑M2/1‑129 (MQ=255) gCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTAGCGGGTAAACCCGCTACAACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcggggttaaccgcgc < 2:3334230‑M2/150‑24 (MQ=255) gggcAGGAGCAGTTGGTGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGGGGGTAAACCCGCTCCTACGGGCGGCCTTTTTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacccgcgaa > 2:3834131‑M2/2‑126 (MQ=255) cGGCAGGAGCTGTTGGAGGCGCTGTTTTCACATATTTGAGCCAGCAGGTTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAAGCCGGcgtaggagcgggtttacccgcgaa > 2:1631709‑M2/1‑126 (MQ=255) ggCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcggaggagcgggtttacccgcgaag < 2:4058503‑M2/150‑26 (MQ=255) gCAGTGGGAGGCGCTGGTTTCACAGATTTGAGCCCGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACACCCACCGATG‑TGCTTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGa < 2:2755587/150‑1 (MQ=255) gggtgttttCACTGTTTTGCGCCTGGTGGTTGGGCATCTTCGGGGTTAAACCCGCGCCTCGGGGGGGCCTTTTTACAACCAGGTTTG‑TGCGCCCA‑CCACCTATGGGGGTTGGGGGGGTTTTTCCCCGGGATGAGGCCGACCCTGCAATAg < 2:406943/144‑1 (MQ=255) ggTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCACCAAAGGGCGGCCGTTGTAAAAACACCCAAG‑GGGGTCCC‑CCCCCAAACCGGCGTGGGAGCGGGTTTTCCCCCGCAGAGGCCGACCCAGCCATAGTTaa > 2:1489498/1‑150 (MQ=255) tCACAGATTTGAGCCAGCAGGGTTGGCCTCTTAGCGGGTAAACCCCCTCCTACGGGCGGCCATTGTACAACCACCGATT‑TGCGTCCA‑CCACCAAAACGGCGTAGGAGCGGGTTTAACCGCGAAGAGGCCCACCCTGCAATAGTGAATCGt > 2:4952788/1‑150 (MQ=255) acaGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGGCTTTTTACAAACACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACACGCGAAGTGGGCGACCCTGGAATTGTTAAGCGTTa > 2:1849559/1‑150 (MQ=25) acaGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGc < 2:4589557‑M2/98‑2 (MQ=255) acaGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGc > 1:4589557‑M2/1‑97 (MQ=255) acaGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCGCCAACGGGCGGCCGTTGTACAACCACCGCTG‑TGCGTCCA‑CCACCAAAACCGCGGAGGAGCGGGTTTACCCCCGCAGAGGCCGACCCAGCCAGAGTGAAGCGGTa > 2:4034774/1‑150 (MQ=37) tGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCCCTCCTACCGGCGGCCTTTGTACCACCCCCGATG‑TGCGTCCACCCACCAA‑CCGGCGGAGGAGCGGGTTTACCCGCGCAGAGGCCGCCCCGGCACTAGTGACGCGGTACGGCTgg > 2:5316947/1‑150 (MQ=25) ccAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTAAAACCACCCATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAAAAGTGAAGCCATACTGCTGGGCCa > 2:2749703/1‑150 (MQ=25) agcagGGTTGGCCTCTTCGCGGGTAAACCCGCTACTAAGGGCGGCCTTTGTACAACCACCGATC‑GGCGTCCA‑ACACCAATCCGGCGTAGGAGCGGGTTTACCCGCGCAGAGGCCGACCCTGCAATATTGAATCGTTACTGCTGGGCCAcc > 2:3571245/1‑150 (MQ=37) gttgggCCTCTTGGGGGTTAAACCGGCGCCGCCGGGGGGCGTTGGTAC‑ACCCCCGGTGTTGGGTCCA‑CCCCCACCCCGGCGTTGGGGGGGTTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTtctc < 2:2251023/146‑1 (MQ=255) gCCTCTTCGCGGGTAAAACCCCTCCAACGGGCGGCCGTTTTAAAACCACCGATG‑TGCGTCCA‑CCACCAAAACCGCGTAGGAGCGGGTTTAACCGCGAACAGGCCGACCCGGCAAAAGTGAAACGGTAATGCTGGGCCACCAtcaaccaca > 2:1061942/1‑143 (MQ=255) tctcCGGGGGAAACCCCCCTCATCCGGGCGGCCTTGGAACAACCACGGATG‑TGCTACCC‑CCACCAAGCCGGCGGCGGCGGGGTTTTACCCGCGAAGCGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGc < 2:3238612/150‑1 (MQ=255) gcgGGTAAACCCGCTCCGACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCa > 1:1158059/1‑150 (MQ=255) ggTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCg < 1:4353664/136‑1 (MQ=255) ggTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCg < 1:4353663/136‑1 (MQ=255) ggTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCg > 2:4353664/1‑136 (MQ=255) ggTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCg > 2:4353663/1‑136 (MQ=255) gTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAgc > 2:5314889/1‑150 (MQ=255) aaaCCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAgcgc > 2:1074900/1‑150 (MQ=255) cccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacccgcgaagaggccaaccctgctggctcaaatctgtgaaaccagcgcctccaactgctcctgccgctcagcctgatt < 2:1201596‑M2/150‑94 (MQ=255) cccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTg > 2:35604/1‑150 (MQ=255) cccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTg > 1:1106219/1‑150 (MQ=255) cccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTg > 2:5572925/1‑150 (MQ=255) cccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTg > 1:4448502/1‑150 (MQ=255) ccGCTCCTCGGGCCGGCCTTGGACCCCCCACCGTTG‑GCCCACCA‑CCACCACCCGGGCGTCGGCGGGGCTCTCCCCGCGACGCGCCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgc < 1:5620843/150‑1 (MQ=255) ccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgc > 1:4131344/1‑150 (MQ=255) ccGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCGTgc > 2:5076875/1‑150 (MQ=255) cGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgcg > 2:4941005/1‑150 (MQ=255) cGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgcg > 2:4941017/1‑150 (MQ=255) cGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgcg > 2:2353664/1‑150 (MQ=255) gCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacccgcgaagaggccaaccctgctggctcaaatctgtgaaaccagcgcctccaactgctcctgccgctcagcctgattcag < 1:377463‑M2/150‑97 (MQ=255) gCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGcgtaggagcgggtttacccgcgaagaggccaaccctgctggctcaaatctgtgaaaccagcgcctccaactgctcctgccgctcagcctgattcag < 1:1948147‑M2/150‑97 (MQ=255) gCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgcgc > 2:3855693/1‑150 (MQ=255) tCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCa > 2:670297/1‑150 (MQ=255) ctcggggCGGCCTTTGTACACCCACCGTTG‑GGCGCCCC‑CCACCCCTCCGGGTTCGGTGCGGTTTTACCCGCGAAGCGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCAtt < 2:2221394/146‑1 (MQ=255) ctcggggCGGCCTTTGACCCCCCCCCGAGG‑TGCGCCCC‑CCCCCACCCCGGCTTCGGAGGGGTTTTCCCCGCGAAGTGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCAtt < 2:4186566/146‑1 (MQ=255) ccccGGGGGGCCTTTTTACAACCACCGTTG‑TGCGCCCA‑CCACCAACCGGGGTTTGGAGCGGGTTTACCCGCTAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCAtt < 2:2221441/147‑1 (MQ=255) tACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTc > 2:3406539/1‑150 (MQ=255) gggCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGc > 1:1731670/1‑150 (MQ=255) ggcggcCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGt > 2:444472/1‑89 (MQ=255) gcggcCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCa > 1:2299904/1‑150 (MQ=255) gcggcCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCa > 2:5131478/1‑150 (MQ=255) gcggcCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCa > 1:39003/1‑150 (MQ=255) gcCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGaa > 1:2518846/1‑150 (MQ=255) gcCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGaa > 1:2001509/1‑150 (MQ=255) cTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATc > 2:2608339/1‑150 (MQ=255) cTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTAACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATc > 2:2204211/1‑150 (MQ=255) tttGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGcc < 1:230554/101‑1 (MQ=255) tttGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCt < 1:670297/150‑1 (MQ=255) tttGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCt > 2:2371873/1‑150 (MQ=255) tttGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCt > 2:3040845/1‑150 (MQ=255) gTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGt > 2:3885547/1‑150 (MQ=255) aCAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGGGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCa > 2:5319031/1‑150 (MQ=255) aCAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCa > 1:3157840/1‑150 (MQ=255) cAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCAc > 2:2397082/1‑150 (MQ=255) aaCCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 1:2539460/1‑150 (MQ=255) aaCCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 1:2539712/1‑150 (MQ=255) aaCCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 1:422479/1‑150 (MQ=255) ccaccGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGt > 1:2048960/1‑150 (MQ=255) accGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGttt > 2:1358762/1‑150 (MQ=255) accGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGttt > 2:1358752/1‑150 (MQ=255) ccGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGtttt > 2:2479819/1‑150 (MQ=255) cttg‑tgCTACCA‑CCACAAATCCGGCTTAGGAGCGGCTTAACCCGCTAAGAGCCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTa < 2:1795204/148‑1 (MQ=255) g‑tgCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGaa > 1:793834/1‑150 (MQ=255) tCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCa > 1:4376381/1‑150 (MQ=255) a‑ccaccaATCCGGCGTAGGATCGGGTTTACCCGCGAAGATGCCGACCCTACAATAGTGAAGCGTTCCTTCTGGGCCACCTTCTCCGACTTGGCGTCAGAGCGGTTGCGCCATTCGGCCAGAAGGTGGTCACGGTTGTTAGGAGAGCAGAc > 2:4749548/1‑150 (MQ=255) a‑ccaccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGAc > 2:1976281/1‑150 (MQ=255) a‑ccaccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGAc > 2:515309/1‑150 (MQ=255) ccaccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTa < 1:2631253/138‑1 (MQ=255) ccaccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACa > 1:40495/1‑150 (MQ=255) ccaccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACa > 1:2361668/1‑150 (MQ=255) ccaccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACa > 1:40826/1‑150 (MQ=255) caccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACaa > 1:4108095/1‑150 (MQ=255) caccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACaa > 1:4108151/1‑150 (MQ=255) caccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACaa > 1:1642710/1‑150 (MQ=255) accaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACaaa > 1:4856194/1‑150 (MQ=255) ccaATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACAAAg > 2:4984595/1‑150 (MQ=255) tCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACAAAGTCGt > 1:1918356/1‑150 (MQ=255) | GGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGCCTTTGTACAACCACCGATG‑TGCGTCCA‑CCACCAATCCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTTTAGAAGCCCAGACAAAGTCGT > NC_002947/5863766‑5864059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |