| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,882,025 | G→C | 8.3% | intergenic (+42/+63) | rpiA → / ← PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,882,025 | 0 | G | C | 8.3% | 622.8 / 7.3 | 200 | intergenic (+42/+63) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (67/113); new base C (15/5); total (82/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 203 total aligned reads displayed.
ATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTC > NC_002947/5881876‑5882174 | aTCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCg < 1:3749645/150‑1 (MQ=255) cAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGc < 2:145637/150‑1 (MQ=255) aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCt > 1:4802387/1‑150 (MQ=255) gCCATCGTCGGCGTGGTGACCAACGGCCTGGTCGCGGCGCGGCCGGCGGATCTGCTGCTGCGGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAATCCCTTGGC‑GGGTAAACCCGCGCCGACAAGCTACCCCACCGGCCggg > 1:2750738/1‑150 (MQ=255) gtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAA‑CCTTCGCGGGGTAAACCCCCACGACAAACGTACCCCCCCGCCCGGGACCCgg > 1:4474595/1‑149 (MQ=255) cgGTGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCCGAAGGCCGAGTACAACCCTTCGC‑GGGTCAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTgg < 2:358410/150‑1 (MQ=255) cgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTgg < 2:2738779/150‑1 (MQ=255) ggCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGc < 1:1071755/150‑1 (MQ=255) ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAATGTACCCCACCGGCCTGGAACCGTGGCGATcc < 1:1128062/150‑1 (MQ=255) ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc < 1:4367705/150‑1 (MQ=255) ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc < 2:1114943/150‑1 (MQ=255) gtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATccc > 2:3642327/1‑150 (MQ=255) ggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTg > 2:1360052‑M1/91‑150 (MQ=255) atgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTa > 1:3928160‑M1/89‑150 (MQ=255) atgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTa > 2:1618727‑M1/89‑150 (MQ=255) tgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAg > 1:3670779‑M1/88‑150 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTATAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtag > 2:4849712‑M2/1‑145 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGGTAAACCC‑CACCAAAAAAGTAACCCAACCCCCGGGAACCGGGGCGGTACCAGTAg > 1:4290912/1‑150 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGGAAAACCGCTCCAACAACGGACCCCACCCGCCAGGAACCGTGGCGATACCagtag < 1:3987654‑M2/150‑6 (MQ=255) aCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCGGGAACCGTGGCGATCCCgggagga < 2:392774‑M2/150‑8 (MQ=255) aCGGCCTGTTCGCGGCGCGGCCGGCGGAT‑‑‑CTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGGAAAACCCCGCCAACAACGGACCCCACCCGCCAGGGACCCGGGCGATACCGGTAGGAGCg > 1:2116269/1‑150 (MQ=255) ggCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagc > 2:5136045‑M2/1‑141 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgg > 2:4688395‑M2/1‑139 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgg > 1:1354035‑M2/1‑139 (MQ=255) cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCagtaggagcggg < 2:2792571‑M2/150‑13 (MQ=255) cgcggcgcggCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttac > 2:395678‑M2/1‑133 (MQ=255) gcggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCGCCTACAAGGGACCCCACCCGCCTGGGACCGTGGCGATCCCaggaggagcggggttacc < 2:3051749‑M2/150‑19 (MQ=255) gcggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAAACCCCGCCAACAAAGTAACCCACCCGCCGGGGACCCTGGCGAAACCcgtaggagcggggttaac < 1:3326161‑M2/150‑19 (MQ=255) cggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAACACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGCACCGTGGCGATCCCtgtaggagcgggtttaccc > 2:2376788‑M2/1‑131 (MQ=255) gcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgc > 2:248420‑M2/1‑129 (MQ=255) cggccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaa > 2:672567‑M2/1‑126 (MQ=255) ggccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAAc < 1:3650601/150‑1 (MQ=255) gccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACa < 1:4613662/150‑1 (MQ=255) gtaTCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCt < 2:4740815/148‑1 (MQ=255) gATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTTAACCCGCTCCTACAAGGGACCCCACCCGCCGGGAACCGTGGCGATCCCGGTAGGGGCGGGGTTTCCCGCGAAAAGGcccag > 2:1554698/1‑148 (MQ=255) tCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTAAAAGGTACCCCACCCGCCAGGAACCCTGGCGATCCCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGAc > 2:5316783/1‑150 (MQ=255) tCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAAACCCCTCCGACCAGGTACCCCACCCGCCTGGAAACGTGGCGATCCCGGTTGGAGCGGGGTTTCCCCCGAACAGGCCCGGAc > 2:529062/1‑150 (MQ=255) ctgctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCATGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACa < 2:1035063/150‑1 (MQ=255) gctgctgctgGGCACCTCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg < 2:5109365/150‑1 (MQ=255) ctgctgctgGGCACCGGTGATGGCGTGAAGAGCCTGATGGCGGTTTAAAACCCTTGGG‑GGTTAAACCCGCTCCTACCCGGTACCCCACGGGCCTGGAACCGTGGCGATCCCTTTTGGAGGGGTTTTACCCGCGAACAGGCCCTGACAGGc < 1:781433/150‑1 (MQ=255) tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTTAAACCCCACCAACAAGGTTCCCCACCCGCCTGGAACCCTGGCGATACCGGTAGGAGCGGGTTTACCCCCGAACAGGCCCAGACAGGCg > 1:1756252/1‑150 (MQ=255) gctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAAACCGCGCCAAAAAGGTAACCCACCCGCCGGGCACCCTGGCGATACCGGTAGGAGCGGGTTTACCCCCCAACAGGCCCGGACACGCGa > 1:1796476/1‑150 (MQ=255) ctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGATTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAt < 1:1275188/150‑1 (MQ=255) ggtgGGCCCCGCTGATGGGGTGAAGCGCCTGAAGGCCGAGTAAAACCCTGCGC‑GGGTAAACCCGCTCCTACAAGGTCCCCCCCCGGCCTGGAACGGTGGCGATCCGTGTTGGTGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 1:3294607/148‑1 (MQ=255) gctgGGCCCCGCTTACGGGTTGAAGAGCCTGACGGCCGTGTAAAACCCTTCGG‑GGGTAAACCCGCTCCTCCACGGTACCCCCCCGGCCTGGAACCGTGGCGATCCCTGTAGGTGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 1:1984464/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCGGAAGGCCGAGTAAAACCCTGCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:4026390/150‑1 (MQ=255) tgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt < 2:5240495/150‑1 (MQ=255) cACCGCTGACGGCGTGAAGCGCCTGACGGCCGATTAAACCCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGAGCCCTGTAGGCGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATcagtcagt < 1:1160809/150‑1 (MQ=255) aCCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTTAAACCGCGCCAACAAGGTACCCCACCCGCCAGGGACCGTGGCGATCCCTGTAGGCGCGGGTTTTCCCGCGGACAGGCCCAGACAGGCGATCcgtcagtc > 2:2824449/1‑150 (MQ=255) gCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgc < 2:3681546/150‑1 (MQ=255) gagggCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTCCGC‑GGGTAAACCCGCTCCACCACGGTACCCCCCCGGCCTGGAACCGGGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgc < 1:3335614/147‑1 (MQ=255) gAAGGCGTGAAGAGCCTGAAGGCCGATTAAACCCCTTCGC‑GGTTAAACCCGCTCCCACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGGGGGTTAACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgc < 1:5334590/150‑1 (MQ=255) aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTCCACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgct < 1:5262822/150‑1 (MQ=255) gCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGa < 1:4579282/150‑1 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 2:4591781/150‑1 (MQ=255) gTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCAGGAAACCTGGCGATCCCAGTAGGAGCGGGTTTACCCGCGAACACGCCCTGACAGGCGAACAGTCACTAGGCTGCTTGAac > 2:4622068/1‑150 (MQ=255) gAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAacac < 2:5420483/150‑1 (MQ=255) aaGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTTAACCCGCTCCAAAAATGTTACCCACCGGGCTGGTAACGTGGCGGTCCCGGTAGGGTCGGGTTTTCCCGCGGAAAGGCCCTGGGGGGCGATGAGTCAGTGGGCGGCGTGTAgaca > 2:637746/1‑150 (MQ=255) aaGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca < 1:2321478/150‑1 (MQ=255) gagCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATa < 2:2423593/150‑1 (MQ=255) ccTGAAGGCCAAGTAAAACCCTTCGC‑GGGTAAACCCCCGCCAACAAGGTACCCCACCCGCCAGGAAACCGGGCGCTCCCGGTAGGAGCGGGTTTACCCCCGAACAGGCCCAGACAGGCGATCAGTAAGTCGGCTGCTTTAACACAAAGaa > 1:5147047/1‑150 (MQ=255) tGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACa < 2:1206343/150‑1 (MQ=255) gAAGGCCGAGTAAAACCCTTCGC‑GGGTTAAACCCCTCCTACAAGGTCCCCCACCGGCCGGGAACCCTGGCGATCCCGGTAGGAGCGGGTTTACCCGCGAACACGCCCTGACAGGCGATCAGTCAGTCGGCGGCGTGTACACATAGAAccc > 2:3424618/1‑148 (MQ=255) gAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg < 2:3916575/150‑1 (MQ=255) atcgcctgtcagggcctgTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTg < 1:1076829‑M1/60‑1 (MQ=255) atcgcctgtcagggcctgTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTg > 2:1076829‑M1/19‑78 (MQ=255) gCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc < 1:3571515/150‑1 (MQ=255) gCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc < 2:1964617/150‑1 (MQ=255) cGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg < 2:4369968/150‑1 (MQ=255) cGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg < 2:3293811/150‑1 (MQ=255) gtttAAAACCGTTCGC‑GGGTAAACCCGCTCCTAAACGGTACCCCACCGGCCTGGAACCTTGGCGTTCCCTGTAGTAGGGTTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 1:287450/147‑1 (MQ=255) gattAAAACCCTTCGG‑GGTTAAACCCGCTCCTACACGTTACCCCACCGGCCTGGAACCGTGGCTATCCCTGTTGGTGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 1:1588243/147‑1 (MQ=255) gattAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 1:3619647/147‑1 (MQ=255) gAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGTAACCGTGGCGATCCCTGTTGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 1:4348527/150‑1 (MQ=255) gAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGATcacg < 2:5043908/150‑4 (MQ=255) aCCCTTCGG‑GGGTAAACCCGCTCCTACATGGTACCCCACCGGCCTGGAACCGTGGCTATCCCTGTAGGTGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGa < 1:2364604/150‑1 (MQ=255) ccTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCAGACAGGCGATCAGTCAGTCGGCTGCTTGAACACCTAGAACAGGTTCGGCTCACTGAcc > 2:5622031/1‑150 (MQ=255) cTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCa < 1:3712669/150‑1 (MQ=255) GGGTAACCCCGCTCCTACACGGTACCCCACCGGCCTGTAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTaaa > 1:3000300‑M1/1‑150 (MQ=255) GGTAAACCCGCTCATACAATTTACCCCACCGGCCTGGAACCGTGGATATCCGTGTTGTCGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCTGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTTACCAGGTAAAt > 1:2192599‑M1/1‑150 (MQ=255) GTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATg > 1:4986723‑M1/1‑150 (MQ=255) cccGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacag < 1:4347241‑M2/150‑105 (MQ=255) ccGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacagg < 2:3288573‑M2/150‑106 (MQ=255) CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTGGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCagtcagtc < 1:891537‑M1/96‑1 (MQ=255) CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca > 2:4291141‑M1/1‑111 (MQ=255) CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCCGGTAAATGGTcccc < 2:4126594‑M1/150‑1 (MQ=255) GCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGc > 1:3580476‑M1/1‑150 (MQ=255) tCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgt < 1:5618457‑M2/150‑110 (MQ=255) cTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg < 1:2782365‑M2/150‑112 (MQ=255) AAGGTCCCCCACCGGCCTGGAACCGTGGCTATCCCTGTAGGAGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCa > 1:2047070‑M1/1‑150 (MQ=255) ggTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttggtcacc < 1:1527440‑M2/150‑118 (MQ=255) gTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGATTACCCGCGAACAGGCCCTGACAGGCGAACACTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCg < 2:4173304/150‑1 (MQ=255) tACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGc < 2:2194442/150‑1 (MQ=255) cccACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAAt > 1:154481/1‑150 (MQ=255) cccACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAAt < 2:4467770/150‑1 (MQ=255) cACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca > 1:4068937/1‑74 (MQ=255) cACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATcc > 1:4698389/1‑150 (MQ=255) cACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATcc > 2:3321366/1‑150 (MQ=255) cGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCt > 2:4366402/1‑150 (MQ=255) ggCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTc < 2:2103773/150‑1 (MQ=255) | ATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTC > NC_002947/5881876‑5882174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |