| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,082,878 | A→C | 11.6% | intergenic (‑175/+63) | PP_5329 ← / ← PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,082,878 | 0 | A | C | 11.6% | 534.4 / 5.5 | 201 | intergenic (‑175/+63) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (113/53); new base C (2/28); total (115/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 205 total aligned reads displayed.
GTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCT > NC_002947/6082730‑6083027 | tgtTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAgg < 2:4107254/150‑1 (MQ=255) ttGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGcc < 2:4876177/150‑1 (MQ=255) ggatggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGa < 1:632709/150‑1 (MQ=255) gatggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGac < 1:5537981/150‑1 (MQ=255) gatggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGac < 1:2408233/150‑1 (MQ=255) atggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCAACACGGGGTTTTGACAGGCCGCCAGGCCGaca > 1:3320849/1‑150 (MQ=255) tggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGacac < 2:4668837/150‑1 (MQ=255) aaCGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAATCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACAccaa > 1:5606993/1‑148 (MQ=255) aaCGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTCCAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTa > 2:4387417/1‑150 (MQ=255) cGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAc < 1:784872/150‑1 (MQ=255) cGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAc < 2:5126055/150‑1 (MQ=255) ggCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCt < 2:1405491/150‑1 (MQ=255) cccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTTCACAGGCCTCAAGGCCGACACCTAAACTGt > 2:240118/1‑150 (MQ=255) ccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTa < 2:1162920/150‑1 (MQ=255) ccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTAGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTa > 1:4632597/1‑150 (MQ=255) ccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCGTCGCGGCGAAATCCGGGTCTAACGGGGGGTTTG‑ACAGGCCGCAAGGGCCACACCCAACCAGtg > 1:2342746/1‑149 (MQ=255) aaGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCGCAAGCC‑CGGCCGGCCGGGGGGGTGCACACGCCGCACGGCCGACCCCGAAccgggccg > 1:4515884/1‑144 (MQ=255) gTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGGGAAAGCC‑CTTCCGACAGGGGGGTTTGACCGGCCGCAAGGCCCCCACCTAAACTGTAgggg > 1:1468718/1‑148 (MQ=255) gTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAg < 1:1084437/150‑1 (MQ=255) tATCGGCAGGCCGCATGAATAAGATATGAATTCATTGTGACAATTGTATGAAAGGCCATCACTTGAATCAGGTCTGGCCTCTTCGCGGATAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTTTAGTAGc > 2:4401667‑M2/1‑149 (MQ=255) cGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggc < 2:4189436‑M2/150‑5 (MQ=255) cGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggc > 2:4446834‑M2/1‑146 (MQ=255) ggCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGaca < 2:226248/130‑1 (MQ=255) ggCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGaca > 1:226248/1‑130 (MQ=255) gCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctt > 1:2930347‑M2/1‑144 (MQ=255) gCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCATCGCGGCTAAAGCC‑GGTCCGACAGGGGGTTTGGACAGGCCTCAAGGCCGACACCGAACCGGTAGGAGcggctt < 1:339242‑M2/150‑7 (MQ=255) aGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGATACCTAACCTGTAGGAGcggcttta > 2:1944431‑M2/1‑142 (MQ=255) gCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagc > 1:4248960‑M2/1‑140 (MQ=255) gCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagc > 2:90011‑M2/1‑140 (MQ=255) gCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagc > 2:791464‑M2/1‑140 (MQ=255) aaTACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCGGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaaga > 2:4587435‑M2/1‑132 (MQ=255) actatatGACTTCATTGTGAAAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGAAACCTAACCTGTTGGAGCGGCTTTAGCCGCGAAGAGGc < 2:3698219/147‑1 (MQ=255) atatGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCGCGTAGCGGCGGAAGCC‑CGTGCGACAGGGGGGTTTGGCACGCCGCAAGGCCCACACCAAACCAGGAGGAGCCGCCGTAGACCCCCAGAGGcccc > 1:3825543/1‑148 (MQ=255) tttGACTTCTTTGTGACATTTGGATGAACGGCCATCACTGGAAGCAGGTGTGGCCTCTGCGCGGCTAAAGCG‑GTTCGTACGGGGGTTTTGCACCGGCCCCACGGCCTACACCTACCCTTTTGGAGGGGCTTTAGCCGCGAAGAGGCCAGt < 2:5207459/148‑1 (MQ=255) tatGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAACTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGt > 2:2631658/1‑150 (MQ=255) gACTTCATTGTGACAATTGGATTAACGGCCATCACTGGAAGCTGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTTGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGc < 2:5463816/150‑1 (MQ=255) ttCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGa > 2:5066513/1‑150 (MQ=255) ttCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑CTTCCTACAGGGGGTTTGCACAGGCCGCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCCCGAAGAGGCCCGTAGCCGa > 1:1853685/1‑150 (MQ=255) tctttGTTACATTTGGATGAACGGCCACCTCTGGAAGCCGGTGTGGCCTCTTCGCGGCTACAGCG‑GTACCTACCGGGGTTTGGCACCGGCCCCACGGCCGACCCCAAACCTGTCGGAGCGGTTTTAGCCGCGAAGAGGCCAGTAGCCGaa < 2:2818425/147‑1 (MQ=255) tctttGTGAAATTGGGATGAACGGCCATCACGGGAAGCGGGGCTGGCCTCTGCGCGGCAACCGCC‑GTCCCCACCGGGGGTTTGCACCGCCCACACGGCCCACACCTACCCTTTCGGCGGGGATTTAGCCGCGAAGAGGCCAGTAGCCGaa < 2:148069/147‑1 (MQ=255) cATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCTGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACCGGGGGTTTGCACCGGCATCAAGGCCTACACCTAACCTGCAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAg < 2:631326/150‑1 (MQ=255) gtgACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGGTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCGTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCa > 2:5591355/1‑150 (MQ=255) tgACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCGGTAGGAGCGGCGTTAGCCGCGAAGAGGCCAGTAGCCGAAgcgccg > 2:1752003/1‑148 (MQ=255) aCAATTGGATTAAAGGCCATCACTGGAAGCAGTTCTGGCCTATTCGCGGCTAAAGCC‑GTACCTACAGGGGGTTTGCACAGGCCTCACGGCCGACACCTAACCTGTAGTAGCGGCTTTAGTCGCGAAGAGGCCAGTAGCCGAAGCGCAGAt < 2:269233/150‑1 (MQ=255) aagtGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCGCAAGGCCGACACCTAACCAGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCa > 2:3528780/4‑150 (MQ=255) aaTTGGATGAAAGGCCATCACTGGAAGCAGGTCGGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCACGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCa < 2:875476/150‑1 (MQ=255) ggATGAACGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACCGGGGGTTTGCACAGGCCTCACGGCCGACACCTAACATTTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAgcgc < 2:2704282/150‑1 (MQ=255) aTGAAAGGCCATCACTGGAAGCAGGTCGGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACCGGGGGTTTGCACAGCCCTCAAGCCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCtt < 2:4278942/150‑1 (MQ=255) gAACGGCCATCCCTGGACGCAGGTCTGGCCTCTGCGCGGCTAAAGCC‑GTACCTACCGGGGGTTTGCACAGGCCTCACGGCCGACCCCCAACCTGTTGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCTGATCTGCGCttcg < 2:310082/150‑3 (MQ=255) aaGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCttgttg > 2:2322616/1‑150 (MQ=255) aGGCCATCACTGGAAGCAGGTCGGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACCGGGGGTTTGCACAGGCCTCAAGGCCGACACTTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTgg < 2:3200157/150‑1 (MQ=255) tCACTGGACGCCGGTCGGCCCTCTTCGCGGCTAACGCC‑GTCCCTACCGGGGGTTTGCACCGGCCTCCCGGCCCACCCCTACCCTGTAGGAGGGGCTTTCCCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCa < 2:3338694/150‑1 (MQ=255) ctcTGGAAGCTGGTCTGGCATCTTCGCGGCTAACGCC‑TTTCCTACTGGGGTTTTGCACCGGCCTCATGGCCGACACCTACCGTGTCGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAg < 1:1322361/148‑1 (MQ=255) cTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGt > 2:3734866/1‑150 (MQ=255) gCAGGTCTGGCCTCTTCGCGGCAAAAGCC‑GTTCCGACAGGGGGTTTTCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGc > 2:1923332/1‑150 (MQ=255) gTCTGGCCTCTTCGCGGCTAAAGCC‑CTTACTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAACTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCACGTACAGGCCCAc > 2:3492852/1‑150 (MQ=255) gggCCTCTTCGCGGATAACGCC‑TTCCCTACGGGGGTTTGGCACCGGCCTCACGGCCTACCCCTAACCTTTTGGAGGGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGc < 2:2342746/149‑1 (MQ=255) ccTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAg > 2:1302657/1‑150 (MQ=255) tctTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTATAGGCCCACGGCTAGAc > 2:596021/1‑150 (MQ=255) ttCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCg > 2:5627566/1‑150 (MQ=255) ttCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCg > 2:4475830/1‑150 (MQ=255) ttCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCGTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCg > 2:4732013/1‑150 (MQ=255) gcgGCTACCGCC‑GTGCCTACCGGGGGTTGGCACCGGCCGCCCGGCCGCCCCCTCCCCTGTCGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACg < 2:5265183/150‑1 (MQ=255) cTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaagaggccagacctgcttccagtgatggcctttcatccaattgtcacaatgaagtcatatcgtattcatgcggcc < 2:405238‑M2/150‑90 (MQ=255) cTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGgcgc > 2:3012828/1‑150 (MQ=255) tAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGca < 2:2094183/150‑1 (MQ=255) tAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGca > 1:2094183/1‑150 (MQ=255) gCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaagaggccagacctgcttccagtgatggcctttcatccaattgtcacaatgaagtcatatcgtattcatgcggcctgccg < 2:5594331‑M2/150‑95 (MQ=255) gCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaagaggccagacctgcttccagtgatggccttgaatccaattgtcacaatgaagtcatatcgtattcatgcggcctgccg < 1:2332434‑M2/150‑95 (MQ=255) gCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAgg > 1:533316/1‑150 (MQ=255) c‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaagaggccagacctgcttccagtgatggcctttcatccaattgtcacaatgaagtcatatcgtattcatgcggcctgccgat < 1:959263‑M2/150‑97 (MQ=255) gTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACATCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCt > 1:291879/1‑150 (MQ=255) gTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaagaggccagacctgcttccagtgatggcctttcatccaattgtcacaatgaagtcatatcgtattcatgcggcctgccgata < 2:2433714‑M2/150‑98 (MQ=255) gTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCt > 1:5444899/1‑150 (MQ=255) ttCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTg > 2:1213936/1‑150 (MQ=255) cctcccgggggTTTGCCCCGGCCGCACGGCCGCCACCTCACCGGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGcc < 2:4515884/144‑1 (MQ=255) cTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGcggctttagccgcgaagaggccagacctgcttccagtgatggcctttcatccaattgtcacaatgaagtcatatcgtattcatgcggcctgccgatacttg < 2:4211545‑M2/150‑102 (MQ=255) tACCGGGGGTTTGCACAGGCCTCACGGCCGACACCTCACGTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCAc < 2:3042530/150‑1 (MQ=255) tACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCAc > 2:5278169/1‑150 (MQ=255) tACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCAc > 1:4775845/1‑150 (MQ=255) tACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCAc > 2:3773308/1‑150 (MQ=255) aCAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACg > 2:183072/1‑150 (MQ=255) cgggggTTTGCACAGGCCTCACGGCCGACACCTAACCTGTTGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACgta < 1:5077180/149‑1 (MQ=255) cgggggTTTGCACAGGCCACAAGGCCGACACATACCCTGTAGGAGGGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACgta < 2:2851815/149‑1 (MQ=255) aGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACgta > 1:1739794/1‑150 (MQ=255) ggggTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACgtagt > 1:2295815/1‑150 (MQ=255) ggTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGtagtag < 2:4632597/150‑1 (MQ=255) ttGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGCGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTaggca < 2:3963505/150‑1 (MQ=255) cacaGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTaggcaggc > 1:3772014/1‑150 (MQ=255) cacaGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTaggcaggc > 1:3771940/1‑150 (MQ=255) accggCCCCACGGCCCACACCTAACCTGTTGGCGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGgcg < 1:349899/147‑1 (MQ=255) acaGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGgcg > 1:2998740/1‑150 (MQ=255) aGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGcc > 2:3054214/1‑150 (MQ=255) ccTCATGGCCGACACCTACCCTGTTGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATc < 1:5572419/150‑1 (MQ=255) ccTCACGGCCCACACCTAACGTTTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATc < 2:1168132/150‑1 (MQ=255) cTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCg > 1:4132283/1‑150 (MQ=255) tCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCgg > 1:443116/1‑150 (MQ=255) cAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCggg < 2:3261144/150‑1 (MQ=255) aaGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGc > 2:893722/1‑150 (MQ=255) aGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCt > 2:3526691/1‑150 (MQ=255) | GTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCC‑GTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCT > NC_002947/6082730‑6083027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |