| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,171,476 | T→G | 5.9% | intergenic (‑230/‑450) | PP_5406 ← / → PP_5407 | transposase/TnsD‑like transposition protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,171,476 | 0 | T | G | 5.9% | 755.1 / 26.4 | 221 | intergenic (‑230/‑450) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein |
| Reads supporting (aligned to +/- strand): ref base T (109/99); new base G (5/8); total (114/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01 | |||||||||||
Only 100 of 224 total aligned reads displayed.
CTGCGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCA > NC_002947/6171327‑6171625 | gCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACt > 1:3822250/1‑150 (MQ=255) cAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACtt < 2:5563719/150‑1 (MQ=255) ggTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTgg < 1:1850340/150‑1 (MQ=255) gTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTggg > 1:1347631/1‑150 (MQ=255) tAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGc < 2:1627570/150‑1 (MQ=255) tAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTGTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTGGGGc > 1:4841706/1‑150 (MQ=255) aCCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCt < 2:2232636/150‑1 (MQ=255) ccGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCtt < 1:670536/150‑1 (MQ=255) ccGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCtt < 1:4127513/150‑1 (MQ=255) cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCttt < 2:966607/150‑1 (MQ=255) cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCttt < 1:2963188/150‑1 (MQ=255) cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAAGGCCCAAGTGCGACCTTGGGCCctt < 2:5107281/150‑1 (MQ=255) cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGGGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCttt < 2:2038676/150‑1 (MQ=255) cgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGt < 1:3476481/150‑1 (MQ=255) cgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAAGGCCCAAGTGCGACCTTGGGCCCTTGt < 1:147149/150‑1 (MQ=255) ttCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTa > 1:969647/1‑150 (MQ=255) cGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCt < 2:3548877/150‑1 (MQ=255) ggTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTg > 2:59197/1‑150 (MQ=255) tgGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTc > 1:2120443/1‑150 (MQ=255) gATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCa < 1:2547940/150‑1 (MQ=255) gATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCa > 2:3583438/1‑150 (MQ=255) aTAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAg > 2:5170831/1‑150 (MQ=255) gcgGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGctc > 2:857834/1‑150 (MQ=255) gcgGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGctc > 1:3897734/1‑150 (MQ=255) ggAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCtctc > 2:1257385/1‑150 (MQ=255) aTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGttt < 2:5322765/150‑1 (MQ=255) cTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagc < 1:4578300/150‑1 (MQ=255) tgtgGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTgg > 1:2777085/1‑111 (MQ=255) tgtgGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagcta > 1:2341888/1‑150 (MQ=255) tgtgGATGAGAGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagcta < 2:5405012/150‑1 (MQ=255) tGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtc > 2:3794933/1‑150 (MQ=255) tGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCCCTCGTTTAGCTAGCTgtc > 2:2703431/1‑150 (MQ=255) gAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcg > 2:2071527/1‑150 (MQ=255) aGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgt < 1:3620897/150‑1 (MQ=255) aGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgt < 1:5478348/150‑1 (MQ=255) gCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgtc > 2:303168/1‑150 (MQ=255) gCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgtc > 1:4929064/1‑150 (MQ=255) cGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCt < 1:1232502/150‑1 (MQ=255) cGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttcttt < 1:5561954/150‑1 (MQ=255) gAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttctttc < 2:5271225/150‑1 (MQ=255) gAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttctttc < 2:2770088/150‑1 (MQ=255) aaaCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCg > 1:1431874/1‑150 (MQ=255) aaCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGt > 1:3038684/1‑150 (MQ=255) aaCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGt > 1:775494/1‑150 (MQ=255) aCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCCCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGtt < 1:2703431/150‑1 (MQ=255) cTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTa < 1:4209391/150‑1 (MQ=255) ttGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAg > 1:3358727/1‑150 (MQ=255) gTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGAGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTCGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTa > 2:3062925/1‑150 (MQ=255) acaTGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTa < 2:2800378/150‑1 (MQ=255) tGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGc < 1:612251/150‑1 (MQ=255) gCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCg > 2:2934713/1‑150 (MQ=255) aaGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGtc < 2:3884384/150‑1 (MQ=255) aaGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCAAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGtc > 1:4684087/1‑150 (MQ=255) ggATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACACGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTcc < 1:1907549/150‑1 (MQ=255) gACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGa > 1:735/1‑150 (MQ=255) aCAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAt > 1:2455802/1‑150 (MQ=255) cAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAtt < 1:1034450/150‑1 (MQ=255) cAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAtt < 2:1310735/150‑1 (MQ=255) aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtg > 2:5035393/1‑150 (MQ=255) aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtg > 2:1196423/1‑150 (MQ=255) aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtg > 2:4923101/1‑150 (MQ=255) aaTGGAGGAGTCAGGTGCCGTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtg > 2:2525350/1‑150 (MQ=255) tGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtgtg > 1:1326212/1‑150 (MQ=255) ggaggaGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGa < 1:1196423/150‑1 (MQ=255) aggagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATc > 1:1645680/1‑150 (MQ=255) gagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCtt < 2:2392470/150‑1 (MQ=255) gagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCtt < 2:4329428/150‑1 (MQ=255) gTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCACGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGc < 1:326652/150‑1 (MQ=255) tCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGcc < 2:3284608/150‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAgg < 1:316861/112‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGccc < 2:1095560/149‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCa > 2:3047538/1‑150 (MQ=255) ggTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCAc > 2:1992507/1‑150 (MQ=255) ggTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCAc > 1:505552/1‑150 (MQ=255) gTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACg > 2:4752331/1‑150 (MQ=255) cTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCa > 2:4487579/1‑150 (MQ=255) cTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCa < 1:4380319/150‑1 (MQ=255) ttttCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCAc > 1:158428/1‑150 (MQ=255) ttttCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCAc > 2:1406651/1‑150 (MQ=255) tGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGcc < 2:5604175/150‑1 (MQ=255) ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtc > 1:5125101/1‑150 (MQ=255) ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtc > 2:18042/1‑150 (MQ=255) ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtc > 2:531387/1‑150 (MQ=255) ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtc > 1:4310814/1‑150 (MQ=255) cacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCa < 1:59197/150‑1 (MQ=255) cacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCa < 2:4545677/150‑1 (MQ=255) cacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCa > 1:3748302/1‑150 (MQ=255) aaaggCCCAAGTGCGACCTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCa < 1:3889162/144‑1 (MQ=255) aaaggCCCAAGTGCGACCTTGGGCCCTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGc > 1:2175288/4‑150 (MQ=255) aGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCt > 2:3749892/1‑150 (MQ=255) gggCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTGTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCGGATTGTGATCTTGCCCACGCTCACGTGCCCTTCTCTCAGGCtt > 2:1679822/1‑150 (MQ=255) gggCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCtt > 2:2695560/1‑150 (MQ=255) gggCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCtt > 2:4240381/1‑150 (MQ=255) aggCCCAAGTGCGACCTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCtt > 1:4439129/2‑150 (MQ=255) ggCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTc < 2:3206591/150‑1 (MQ=255) ccAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGAGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCt < 1:1370615/150‑1 (MQ=255) cAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTATGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTg > 2:694032/1‑150 (MQ=255) ggTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACg < 1:1383655/150‑1 (MQ=255) gTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGc > 1:822705/1‑150 (MQ=255) tCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCa < 2:817186/150‑1 (MQ=255) | CTGCGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCA > NC_002947/6171327‑6171625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |