| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,178,238 | A→G | 5.1% | intergenic (‑152/+38) | PP_5410 ← / ← glmU | DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,178,238 | 0 | A | G | 5.1% | 888.2 / 20.5 | 271 | intergenic (‑152/+38) | PP_5410/glmU | DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (140/117); new base G (6/8); total (146/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 277 total aligned reads displayed.
GTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCT > NC_002947/6178091‑6178387 | tttAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACAt > 1:4871487/1‑150 (MQ=255) tttAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACAt > 2:515961/1‑150 (MQ=255) tttCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCg < 2:3057322/150‑1 (MQ=255) ttcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCgg < 1:484789/150‑1 (MQ=255) ttcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATGTGAATAAGTCgg < 1:1798485/150‑1 (MQ=255) ttcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATGTGAATAAGTCgg < 1:5243169/150‑1 (MQ=255) tcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGc < 1:79084/150‑1 (MQ=255) tcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCg > 1:712810/1‑150 (MQ=255) cgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGa < 1:902123/150‑1 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt < 1:3761505/150‑1 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt < 1:2443568/150‑1 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt < 1:2254199/150‑1 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt > 2:4125988/1‑150 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATGTGAATAAGTCGGCtttttta < 2:4600304/150‑5 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCGGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt < 2:5098194/150‑1 (MQ=255) aGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGa < 1:4346770/150‑1 (MQ=255) ttAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGaaa > 1:4780430/1‑150 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt < 1:3973165/150‑1 (MQ=255) aaTCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAAt > 1:4908373/1‑150 (MQ=255) aaaaCCTTAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACt < 2:574032/150‑1 (MQ=255) aaaaCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACt > 2:5252221/1‑150 (MQ=255) aaCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCa < 2:797944/150‑1 (MQ=255) aCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAg > 2:2955286/1‑150 (MQ=255) tAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGctc > 2:1788472/1‑150 (MQ=255) aCGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttct < 2:3754839/150‑1 (MQ=255) cgcgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGa < 1:2714989/150‑1 (MQ=255) gcgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGAt > 1:2978764/1‑150 (MQ=255) gATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCt > 1:883714/1‑124 (MQ=255) ttCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGAtcttc > 1:466658/1‑150 (MQ=255) tCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCg > 2:4748474/1‑150 (MQ=255) cAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCgg < 1:5296769/150‑1 (MQ=255) gCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGgcg > 2:2544728/1‑150 (MQ=255) tGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCTGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCt > 1:1852551/1‑150 (MQ=255) tGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCt > 1:3216253/1‑150 (MQ=255) gCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCa < 2:1484513/150‑1 (MQ=255) cTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAg < 1:1586243/150‑1 (MQ=255) gACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGcc < 1:3480527/150‑1 (MQ=255) cTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGa > 1:2377489/1‑150 (MQ=255) cTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGa > 1:2653237/1‑150 (MQ=255) cTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGa > 2:2034593/1‑150 (MQ=255) cTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGa > 1:3559173/1‑150 (MQ=255) gtgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGaaa < 1:3795927/150‑1 (MQ=255) gtgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGaaa < 1:3442425/150‑1 (MQ=255) gATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGt > 2:2892901/1‑150 (MQ=255) gATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGt > 1:1132230/1‑150 (MQ=255) gATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGt > 1:2931085/1‑150 (MQ=255) aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt < 2:1272797/150‑1 (MQ=255) gttGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcgc > 1:4182667/2‑150 (MQ=255) ttGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCt < 2:5389960/150‑1 (MQ=255) tGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTg > 2:2261042/1‑150 (MQ=255) tGCTTCTGCTTTGAGGCGGTCCAATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTg < 1:4866810/150‑1 (MQ=255) ttCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcg > 2:4041232/1‑150 (MQ=255) cTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgcg > 1:3063613/1‑150 (MQ=255) gCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCa < 1:3640992/150‑1 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg > 1:1259997/1‑150 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg > 1:1091023/1‑150 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg < 2:750638/150‑1 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg > 2:1338757/1‑150 (MQ=255) tGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACggg < 1:1792155/150‑1 (MQ=255) tGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACggg < 1:2184975/150‑1 (MQ=255) gAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGc < 2:4207251/150‑1 (MQ=255) ggCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTa < 2:18694/150‑1 (MQ=255) gCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTAc < 1:1450578/150‑1 (MQ=255) gCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTAc > 1:4888697/1‑150 (MQ=255) gCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTAc > 1:2771700/1‑150 (MQ=255) cttttttattGGCGCGGCTGCGCCTATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACa > 2:1593513/7‑150 (MQ=255) cGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACa < 1:1315182/150‑1 (MQ=255) tCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGcc > 1:2486341/1‑150 (MQ=255) ccTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCa < 1:2343787/150‑1 (MQ=255) cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg < 2:5052245/150‑1 (MQ=255) cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg < 2:2133771/150‑1 (MQ=255) tataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAgg > 1:974022/1‑150 (MQ=255) tataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAgg < 2:4101582/150‑1 (MQ=255) gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACCGCCAGGTCAcc > 2:4970746/1‑150 (MQ=255) gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCAcc > 1:1644686/1‑150 (MQ=255) gcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCg > 2:5294209/1‑150 (MQ=255) gCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCtt > 1:1126151/1‑150 (MQ=255) cAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGc > 2:4687197/1‑150 (MQ=255) tAAAAAAGCCGACTTATTCAGATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGTTCTTCTCCGGGCGCTTCCAGCCGGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCGTg > 2:2688230/1‑150 (MQ=255) atcgaaaGCCGACTTATGTGAATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTg > 2:3226736/5‑150 (MQ=255) aaaaaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTg < 1:5167645/149‑1 (MQ=255) aaaaaaGCCGACTTATTCACATACGTCGGCTTGCGCTGGAACGGGCTGAGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg < 2:3591071/150‑1 (MQ=255) aaaaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg < 2:2772220/150‑1 (MQ=255) aaaaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg < 1:515961/150‑1 (MQ=255) aaaaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg < 1:4987954/150‑1 (MQ=255) aaaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCGTCTACAGCCTggg > 2:5457874/1‑150 (MQ=255) aaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCGTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGa > 1:4575642/1‑150 (MQ=255) aGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGTGTGAt < 1:4410027/150‑1 (MQ=255) gCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATg < 2:1478271/150‑1 (MQ=255) ccGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTCCAGCCGGGGTGAggg > 2:4196273/1‑150 (MQ=255) ccGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATgg > 2:936355/1‑150 (MQ=255) ccGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATgg > 2:102925/1‑150 (MQ=255) cGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGt > 1:618495/1‑150 (MQ=255) gACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTc < 2:4823777/150‑1 (MQ=255) gACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTc > 1:3320147/1‑150 (MQ=255) cTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGa < 2:1219778/150‑1 (MQ=255) cTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGa < 2:891960/150‑1 (MQ=255) ttATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAg > 2:3280105/1‑150 (MQ=255) tATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCACTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGc < 2:5326238/150‑1 (MQ=255) ttCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCg > 1:2049161/1‑150 (MQ=255) | GTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCT > NC_002947/6178091‑6178387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |