| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 565,993 | T→G | 5.2% | intergenic (+30/‑134) | katA → / → bfr‑I | catalase/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 565,993 | 0 | T | G | 5.2% | 854.5 / 21.7 | 254 | intergenic (+30/‑134) | katA/bfr‑I | catalase/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base T (124/116); new base G (7/7); total (131/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 258 total aligned reads displayed.
GCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCACCC > NC_002947/565844‑566140 | cGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTg < 1:5152379/150‑1 (MQ=255) gTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCGCATTTggg > 2:5386277/1‑150 (MQ=255) cATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGt > 2:2852539/1‑150 (MQ=255) tGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGttc < 2:4311354/150‑2 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTc < 1:529672/150‑1 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGttcttc < 2:4669083/150‑1 (MQ=255) gggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCa < 1:174562/150‑1 (MQ=255) ggcgTCAGCGAAGTTGTCATTCTGCGTCAGCTACTGTACTTCTTCTAGGCGGATCCGGCTTTCGGCGAAGGGTTTGCAAAGGCTTTGGGCATCCATCTCGCCTAAGTCGAAGTGTTAAGAAGATCCGGCCTGCTTTGGGCGGTTTTTCaa < 2:3748465/150‑1 (MQ=255) cAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAat < 2:4828035/150‑1 (MQ=255) aaGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCac < 1:3324067/150‑1 (MQ=255) aGATGTCATTCATCGTCAGCTACAGTACTTCTTCTAGTCGGATCCGGCTTACGTCGAAGGGATTGCATAGGCTTTGGGCTTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCact < 2:2711607/150‑1 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGttt > 1:5066247/1‑150 (MQ=255) cGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGa < 1:2271455/150‑1 (MQ=255) cGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGa > 2:698060/1‑150 (MQ=255) cAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGAttt < 2:2116527/150‑1 (MQ=255) gCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGAttttt < 1:886070/150‑1 (MQ=255) gttgaGTACTGCTTCTAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGGCTAAGTCGAAGTGATAAGAAGAAGGGCCCTCCTTTGGGCGGTTTTTGAATGAATATCACTACTGTTTAACCGAtttttt < 1:3789152/146‑1 (MQ=255) cAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCg > 1:3796071/1‑150 (MQ=255) gTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTc > 1:4699145/1‑150 (MQ=255) gTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTc > 1:4732193/1‑150 (MQ=255) cttcttCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa < 1:4709180/150‑1 (MQ=255) cttcttCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa < 2:4483013/150‑1 (MQ=255) cttcttCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa < 2:2827852/150‑1 (MQ=255) cttcttCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa < 2:4015003/150‑1 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAt > 2:1655714/1‑150 (MQ=255) actacAACGCGGATCCGGCTTACCGCGAAGGGATTGCAAAGGCATTGGGCATCAATCACGCCAAAGTCGAACTGATAAGAAGAACCGCCCTCATTTGGGCGGTATTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAtt < 2:609437/146‑1 (MQ=255) cttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCATAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTg < 2:41349/150‑1 (MQ=255) ttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgc > 1:308933/1‑150 (MQ=255) tcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgcg > 1:2633811/1‑150 (MQ=255) ggATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttttt < 1:74202/150‑1 (MQ=255) aTCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa < 2:3755792/150‑1 (MQ=255) aTCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa < 2:1717553/150‑1 (MQ=255) aTCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa < 1:209741/150‑1 (MQ=255) tCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAg > 1:3948451/1‑150 (MQ=255) ccGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGt < 1:454431/150‑1 (MQ=255) ccGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGt < 1:4495216/150‑1 (MQ=255) ggCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGa > 2:4885866/1‑150 (MQ=255) ggCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGa > 1:4428350/1‑150 (MQ=255) tACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCAt < 1:4928625/150‑1 (MQ=255) aCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATa < 1:1284601/150‑1 (MQ=255) aCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATa < 1:4951893/150‑1 (MQ=255) ggCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa < 1:5494408/150‑1 (MQ=255) gAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaa > 2:3138076/1‑150 (MQ=255) aaGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaa < 2:3371518/150‑1 (MQ=255) ggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGc > 2:3280992/1‑150 (MQ=255) ggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGc > 2:2646034/1‑150 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTg < 1:4154091/150‑1 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTg < 1:2035883/150‑1 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTg < 1:1655714/150‑1 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGTCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 2:4938911/150‑1 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 1:775337/150‑1 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 2:5504534/150‑1 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 1:2741825/150‑1 (MQ=255) gCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGtt > 2:1116995/1‑150 (MQ=255) gCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGtt < 2:2449088/150‑1 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTCCTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 2:5547878/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 2:4801821/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 2:4387690/1‑150 (MQ=255) aaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcac < 1:1969583/150‑1 (MQ=255) aaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcac > 1:4391202/1‑150 (MQ=255) ggCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCacac < 1:1863610/150‑1 (MQ=255) tttGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAt > 1:1741315/1‑150 (MQ=255) tttGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAt > 2:1943258/1‑150 (MQ=255) gggCATCAATCTCGCCTAAGGCGAAGTGATAAGAAGAACCGCCCTCATGTGGGCGGTTTTTCAATGAATATCACTACTGATCAACCGATTTTGTGCGTCTGATTGCGCGTTTTTCAGTGACCAGAGACAAAAGCTGGTTCACACTAtgtg < 1:631001/150‑1 (MQ=255) ggCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTgg < 2:91718/150‑1 (MQ=255) cATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCa < 1:2058047/150‑1 (MQ=255) cATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCa < 1:349860/150‑1 (MQ=255) cATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCa < 1:4020886/150‑1 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa > 1:1228273/1‑123 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa < 2:1228273/123‑1 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCAt < 2:5241822/150‑1 (MQ=255) aaTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGa < 1:1517244/150‑1 (MQ=255) aTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGAc < 1:1115866/150‑1 (MQ=255) aTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGAc < 1:959575/150‑1 (MQ=255) aTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGAc < 1:4143828/150‑1 (MQ=255) tcGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtt > 2:355850/1‑150 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCTTTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt < 1:3754254/150‑1 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt > 1:2506510/1‑150 (MQ=255) cTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTca < 1:1888951/150‑1 (MQ=255) aaGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTcaca < 1:2852539/150‑1 (MQ=255) cGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 2:3508818/150‑1 (MQ=255) gAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgag > 1:1459569/1‑150 (MQ=255) gAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgag > 2:2974685/1‑150 (MQ=255) attcattgaaaaaCCGCCCAAATGAGGGCGGTTCTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCGTAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAAt > 1:2216328/8‑150 (MQ=38) tGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCGCACTATGTGGCATAGACGTTTTCACATGGAGAATc > 2:416676/1‑150 (MQ=255) aTAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAg < 1:3384029/150‑1 (MQ=255) ttgaaaaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAggg > 1:1927055/3‑150 (MQ=255) ttgaaaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 2:3791095/3‑111 (MQ=38) gaagaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTCTGTGGCATAGACGTTTTCACATGGAGAATCAGGGCg > 1:3238382/1‑150 (MQ=255) gaagaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCg > 1:3666076/1‑150 (MQ=255) gaagaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCg > 2:2347719/1‑150 (MQ=255) aagaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGa > 1:1037417/1‑150 (MQ=255) aaaaCCGCCCAAATGAGGGCGGTTCTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGAt > 2:2272551/3‑150 (MQ=255) aCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCa < 2:3796071/150‑1 (MQ=255) cGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 2:2997961/150‑1 (MQ=255) gCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGACTCAGGGCGATGCAAgg > 1:3856559/1‑150 (MQ=255) cccTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGc > 2:1420979/1‑150 (MQ=255) cTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCa > 1:3724743/1‑150 (MQ=255) aTTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCAccc > 1:2974309/1‑150 (MQ=255) tttGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAAt < 2:1331979/128‑1 (MQ=255) | GCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCACCC > NC_002947/565844‑566140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |