| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,074 | T→G | 16.3% | intergenic (+35/+117) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,074 | 0 | T | G | 16.3% | 423.9 / 15.1 | 169 | intergenic (+35/+117) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (44/90); new base G (30/2); total (75/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.18e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
GCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCC > NC_002947/667926‑668223 | gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 1:2721966‑M1/150‑1 (MQ=255)gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 2:109417‑M1/150‑1 (MQ=255)gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 1:4507590‑M1/150‑1 (MQ=255) tGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGT > 2:3934992‑M1/1‑150 (MQ=255) cccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCG > 1:5097144‑M1/1‑150 (MQ=255) cccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGgggcggg > 1:3283738‑M1/1‑143 (MQ=255) gggCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATa > 1:4661569/1‑150 (MQ=255) cTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGGTGCGGCGCGGTGGGGCCg > 1:1015572/1‑150 (MQ=255) cgcgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGcccc > 2:3388582/1‑147 (MQ=255) gcgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGTGTCGCGATGGGGCCGctttg < 2:3624922/150‑5 (MQ=255) cgTGCCGCCGCCGCAGGTCGAATCGATGGACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 2:3444404/150‑1 (MQ=255) gTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg < 2:257053/150‑1 (MQ=255) tGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGACCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCgg < 2:5423107/150‑1 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagc < 1:1966961‑M1/150‑18 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagc < 1:1967051‑M1/150‑18 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 1:1527171/150‑1 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 2:5112597/150‑1 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 1:3254212/150‑1 (MQ=255) cgccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGCGGCGCGGTAGGGCCGCACAGCGGccc > 1:296096/1‑150 (MQ=255) cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGa < 2:895410/150‑1 (MQ=255) cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGa < 2:3001383/150‑1 (MQ=255) cgcCGGTCGAATCTTTGTAGCGGCCTAACCTGCAGGCCGTGGGCTTTGGGCATGGGGAGATGAGGGTGAACGCCCGCTAGAGCCCCGCTCACGGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGAAATGCGGCCCCGACaa < 2:433604/150‑1 (MQ=255) gcAGGTCGATTCGATGTACGGGCCGAACCTGCTGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGTGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAt < 2:2582339/150‑1 (MQ=39) gTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCTTGCGTGGCGGTAGGGCCGCAAAGCGGCCCCCACaagtaaa > 1:2805062/1‑145 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATATGGCCGCCAAGCGGCCCCGCCCATTCAAgcg > 1:4114361/1‑150 (MQ=255) gATGTACCGGCCGAACCTGCAGGCGGTGGGCGTTGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGaa < 2:2013388/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg < 2:1263274/150‑1 (MQ=255) tACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAATTAAAGCGGCGAAGCTg > 2:3002802/1‑150 (MQ=255) ccGGCCGCACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaa < 2:4952926/150‑1 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGaa < 2:5468874/150‑1 (MQ=255) gCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCCGCGCGCTAGGGCCGCCAAGCGGCCCCGCCCAATCAAGCGGCGCAGCGGAAAGc > 2:4425715/1‑150 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:4009135/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc < 2:5354457/135‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc > 1:5354457/1‑135 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGccag > 2:1309743/1‑148 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:605854/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAACCGGCGCAGCTGAAAGCCTg > 2:3248196/1‑150 (MQ=255) ccccTGCCGGCCGGGGGCGCTGGGCACGGGGAGAGGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGGGGGCGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1502895/148‑1 (MQ=255) acccTGCAGGCCGTGGGCGTTGGGCATGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGTAATGTGTGGGAGCGGCCTTGCGTCGCTATTGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:4858314/148‑1 (MQ=38) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:2232763/150‑1 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGTCGCGATAGGGCCCCAAAGCGGCCCCGACAAATAAACCCGCGAACCAGAAAGACAggg > 1:5266940/1‑150 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTggg < 2:2736370/150‑1 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCCCCAAGCCGCCCCGACAAGTCAAGCGGCGAAGCGGGAAGCCGGGGgc > 2:3904337/1‑150 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCCATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCCAAGCGGAAAGCCAGGGgc > 2:4821848/1‑150 (MQ=39) tGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGGGGCGGGGCGCTGGGGCCGCACGGCGGGCCCCCCCCATCAAGCGGCGCCGCGGGAGGCCGGGGgcg > 1:5425327/1‑149 (MQ=255) aGGGCGTGGGCGATGGGCAAGGGTTGTTGTGGGTGAAAGCCCGCTTGATCCCCGGTATACGGTGAATGTGTGGGTGCGGGCTTGGGTCGCGTTGGGGCCGCAAAGGGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 1:397866/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCATGGGTAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCTATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 1:2606763/150‑1 (MQ=255) gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgt < 1:4606702/150‑1 (MQ=255) ccGTGGGCTATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:5569447/150‑1 (MQ=255) ccGTGGGCGTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGGAATGTGTGGGAGCGGCCTTGCGCCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:3870283/150‑1 (MQ=255) ccGTGGGCGATGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTCCGCGGAAAGTGTGGGCGCGGCCTTGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:3479056/150‑1 (MQ=255) gTGGGCGTTGGGCAAGGGGATATGACGGTGAACGCCCGCTAGAGACCCGCTCTCCGGGGAAAGTGTGGGCGCGGCCTTGGGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:1046523/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:3165011/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAtagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcg < 1:1556057‑M1/150‑64 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 2:4358450/150‑1 (MQ=255) tGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGCTAAGCGGCCCCGACAATTCAAGCGGCGATGCTGAAAGCCTGGGGCTGCTGTGCAg < 2:457741/150‑1 (MQ=255) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAtagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggc < 1:3934992‑M1/150‑66 (MQ=255) cgttGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 2:4166679/147‑1 (MQ=255) cGATGGGCATGGGGAGATGAGGGTGAAAGCCCGCTAGAGACCCGATCTAGGCGGAACTTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 1:316871/150‑1 (MQ=38) cGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTAGGGCTGCACAGCAGcccc < 1:2089691/150‑2 (MQ=38) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGTTGGGGGCGGCACGCGGCCCCGCCAAATCAAGCGGCGCGGCAGGACGCCGGGGGCTGCGGTGCTGcccg > 1:4671716/1‑149 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 2:1608281/150‑1 (MQ=255) gATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGCAGCTGAAAACCAGGGGCAGCGGTGCAGcccag > 1:4617969/1‑148 (MQ=38) aTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctat < 1:2834861‑M1/150‑71 (MQ=255) gggCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcg > 1:3677015‑M2/1‑147 (MQ=255) gggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcg < 1:4884671‑M1/150‑73 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcg < 1:1297734‑M1/150‑75 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCATGCGTCGCGCTAGGGCCCCAAATCGGCCCCCACAAAAAAATCGGCGAAGCAGAAAGCCAGGGGCGGCTGTGCAGCCCAGgcgcg < 2:1885696‑M2/150‑6 (MQ=255) catggggAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa < 1:1609651/147‑1 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgac < 1:4408169‑M1/150‑77 (MQ=255) ggggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgc < 2:5531117‑M2/150‑10 (MQ=255) tgatGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCTATCGGGCCGCACAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:734476‑M2/2‑137 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:2171185‑M2/1‑137 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:2171188‑M2/1‑137 (MQ=255) gttgcgggtgaacgCCCGATAGAGACCCGCTCTCCGCGGACTGTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggc > 1:2819441‑M2/7‑136 (MQ=255) gaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggc > 2:2781507‑M2/1‑136 (MQ=255) tGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTTCGTCGCCATATGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCAGGGGCTGCTGTGCAGCCCAGtagcgacccaaggccccaccca < 2:1979007‑M2/150‑23 (MQ=255) cgCCCGCTAGCCCCCCCCTCTCCGCGGAACGGGTGGGAGCGGCCTGGCGGCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAACGCCTGGGGGTGCTGGGCAGCCCTGTCGGGACGCAAGGCCGCTCCCACaaa < 2:2758440/149‑1 (MQ=21) ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGAc > 2:3621885/1‑150 (MQ=255) cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCGGAAAGCCTGGGGCTGCGGTGCCGCCCTGTCGCGACGCCAGGCCGCTCCCACAAAGAcc > 2:1834852/1‑150 (MQ=255) gCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCCGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCGGTCGCGACGCCAGGCCGCGCCCCCAAAGACcg > 2:148562/1‑150 (MQ=37) gCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 2:1643540/113‑1 (MQ=255) atctACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGGGCAGCCCTGTCGCGACGCCAGGCCGCTCCCCCAAAGACCGCGCAGATCAGTg > 2:2168910/2‑150 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGAGGCGAAGCAGAAACCCAGGGGCTGCTGTGCAGCCCAGTCGCGACGCAAGGCCGCTCCCACAAATACCGCGCAGATCAGTGGAt > 2:4206578/1‑150 (MQ=25) tACGCGGAAAGTGTGGGAGCGGCCATGCCTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATAAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGGGCAGCCCAGTCGCGACGCAAGGCCGCTCCCCCCAAGACCGCGCCCATAACTGGAt > 2:5172604/1‑150 (MQ=25) gcgGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAc > 2:4632490/1‑150 (MQ=255) ggAAAGTGTGGGCGCGGCGTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCCAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGATGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAccc < 2:5097144/150‑1 (MQ=37) tgGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGAAGCTGAAAGCCTTGGGCTGCAGTGCAGCCCAGTCGCGACGCAAAGCCGCGCCCACAAAGACCCCGCACATAAGTGGAACACCCAGcacaac > 2:2681591/1‑148 (MQ=25) ggAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGAACCTGAAGGCCAGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACCAAGACCGCGCAGATCAGTGGATAACCCACCTCAacac > 2:1228058/1‑150 (MQ=37) gCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgcgttgcggcccaatcgcgacgcaaggccgctcccacacagtccgcggagagcgggtctctatcgggcgttcacccgcaac > 1:2819441‑M1/1‑14 (MQ=255) gCCTTGCGTCGCGAcagggcggcaccgccgccccaggctttccgcgtcgccgcgggaattgtcggggccgcgttgcggccctatcgcgccgcacggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatc < 2:5106950‑M1/150‑137 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:4414966/1‑150 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:3841226/1‑150 (MQ=255) gCCTTGCGTCGCGATACGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGTCCTCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAACCACAg > 2:3841560/1‑150 (MQ=255) ccTTGCGTCGCTATTGGCCCGCAACGCGGCCCCGAAAATTCAAGCGGCGAAGCTTAAAGCGTGGGGCTGGTGTGCAGCCCTGTCGCGACGAAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc < 2:4355945/150‑1 (MQ=255) ccTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctgtgcggcccgatagcgacgcaaggccgctcccacacattccgcgtagagcgggtctctagcgggctttcaccgtcatca > 1:734476‑M1/1‑13 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2310893/1‑150 (MQ=255) ccTTGAGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacacattccgcgtagagagggtctctagcgggctttcaccgtcatct > 2:4561160‑M1/1‑13 (MQ=255) cTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgcttttcggccctatcgcgacgcaaggccgctcccacacgttacccgtagatcgggtctctagcgggggttcaccgtcaaata > 1:228253‑M1/1‑12 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGTGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 1:8139/1‑150 (MQ=255) | GCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCC > NC_002947/667926‑668223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |