| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,079 | T→G | 9.3% | intergenic (+40/+112) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,079 | 0 | T | G | 9.3% | 424.9 / 3.2 | 170 | intergenic (+40/+112) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (57/90); new base G (19/2); total (76/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
TGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCA > NC_002947/667930‑668228 | tGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGT > 2:3934992‑M1/1‑150 (MQ=255) gACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTC < 2:1345284‑M1/150‑1 (MQ=255) cccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGGGTCGCG > 1:3283733‑M1/1‑150 (MQ=255) gCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAgg < 1:598553/150‑1 (MQ=255) cTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGGTGCGGCGCGGTGGGGCCg > 1:1015572/1‑150 (MQ=255) cTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGCTGGGGCCg > 1:3177926/1‑150 (MQ=255) ccGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaa > 1:2013388/1‑150 (MQ=255) gcgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGTGTCGCGATGGGGCCGctttg < 2:3624922/150‑5 (MQ=255) cgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 1:3960622/150‑1 (MQ=255) cgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 2:2974804/150‑1 (MQ=255) cgTGCCGCCGCCGCAGGTCGAATCGATGGACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 2:3444404/150‑1 (MQ=255) gTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg < 2:257053/150‑1 (MQ=255) tGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGTCAAGGGGAGATGACTGTGAAAGCCCGCTAGATACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCgg < 2:2600261/150‑1 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagc < 1:1966961‑M1/150‑18 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 1:1527171/150‑1 (MQ=255) ccgccgcAGGTCGAATCGATGGACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGcccta < 1:2864001/150‑3 (MQ=255) cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGa < 2:895410/150‑1 (MQ=255) cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGa < 2:3001383/150‑1 (MQ=255) ccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccctatcg < 2:1856619/150‑6 (MQ=255) cgcCGGTCGAATCTTTGTAGCGGCCTAACCTGCAGGCCGTGGGCTTTGGGCATGGGGAGATGAGGGTGAACGCCCGCTAGAGCCCCGCTCACGGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGAAATGCGGCCCCGACaa < 2:433604/150‑1 (MQ=255) gTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGCGGGGCGGTAGGGCCGCCAAGCGGCCCCCACaaagaaa > 1:2805082/1‑145 (MQ=255) tCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCCCGAAAGGGCCGCAAACCGGCCCCCACAAATCaac > 2:1240438/1‑149 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATATGGCCGCCAAGCGGCCCCGCCCATTCAAgcg > 1:4114361/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcgg < 2:5384063/150‑1 (MQ=255) gATGTACCGGCCGAACCTGCAGGCGGTGGGCGTTGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGaa < 2:2013388/150‑1 (MQ=255) ccGGCCGCACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaa < 2:4952926/150‑1 (MQ=255) ggCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAg > 2:3126717/1‑150 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:4009135/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc > 1:5354457/1‑135 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:605854/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCGGAAAGCCTg > 2:1309580/1‑150 (MQ=255) ccccTGCCGGCCGGGGGCGCTGGGCACGGGGAGAGGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGGGGGCGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1502895/148‑1 (MQ=255) acccTGCAGGCCGTGGGCGTTGGGCATGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGTAATGTGTGGGAGCGGCCTTGCGTCGCTATTGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:4858314/148‑1 (MQ=38) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1503142/150‑1 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTggg < 2:2736370/150‑1 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCCCCAAGCCGCCCCGACAAGTCAAGCGGCGAAGCGGGAAGCCGGGGgc > 2:3904337/1‑150 (MQ=255) ggCAGGCCGTGGGCGATGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGACAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAGTCAAGCGGCGAAGCTGAAAGCCTGGGgct < 2:5452727/149‑1 (MQ=255) aGGGCGTGGGCGATGGGCAAGGGTTGTTGTGGGTGAAAGCCCGCTTGATCCCCGGTATACGGTGAATGTGTGGGTGCGGGCTTGGGTCGCGTTGGGGCCGCAAAGGGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 1:397866/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCATGGGTAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCTATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 1:2606763/150‑1 (MQ=255) gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgt < 1:4606702/150‑1 (MQ=255) gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGCCCATTCAAGCGGCGAAGCTGTAAGCCGGGGGCTGCtgt > 2:4469617/1‑150 (MQ=38) ccGTGGGGTTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:3479100/150‑1 (MQ=255) ccGTGGGCTATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:5569447/150‑1 (MQ=255) ccGTGGGCGTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGGAATGTGTGGGAGCGGCCTTGCGCCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:3870283/150‑1 (MQ=255) gggggCGATGGGCACGGGGAGATGACGGTGAACGCCCGCTAGACACCCGCTCTACGGGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:5312035/148‑1 (MQ=38) gTGGGCTTTGGGAATGGGGAGATGACGGTTAAAGCCCGCTAGACACCCGCTCTACGCGTAAAGTTTGGGAGCGGCATTGCTTCGCTATAGGCCCCAAAAGCGCCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:5207688/150‑1 (MQ=255) gTGGGCTATGGGCAAGGGTAGATGACGTTGAAAGCCCGCTAGATACCCGCTCTACGCGTAAAGTTTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:2233514/150‑1 (MQ=38) gTGGGCGTTGGGCAAGGGGATATGACGGTGAACGCCCGCTAGAGACCCGCTCTCCGGGGAAAGTGTGGGCGCGGCCTTGGGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:1046523/150‑1 (MQ=255) gTGGGCGTGGGGCATGGGGAGATGCGGGTTAAAGCCCGCTAGAGACCCGCTCTAGGCGGAAAGTGTGGGCGCGGCCTGGCGTCGCTATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:477941/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:3165011/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAtagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcg < 1:1556057‑M1/150‑64 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 2:4358450/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa > 2:3304674/1‑150 (MQ=255) tGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGCTAAGCGGCCCCGACAATTCAAGCGGCGATGCTGAAAGCCTGGGGCTGCTGTGCAg < 2:457741/150‑1 (MQ=255) cgttGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 2:4166679/147‑1 (MQ=255) cGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTAGGGCTGCACAGCAGcccc < 1:2089691/150‑2 (MQ=38) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGTTGGGGGGGGGTTGGGGCGGGTAGGGGGGCCGGCAATTCAAGCGGGGAAGCTGATAGGCTGGGGGTGGTGTGGGGCCCt > 1:4671530/1‑150 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGCTAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGAAGCGGCAAGCCTGGGGCTGCTGTGCAGcccg > 2:4847493/1‑149 (MQ=255) gATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGCAGCTGAAAACCAGGGGCAGCGGTGCAGcccag > 1:4617969/1‑148 (MQ=38) ctgGGCACGGGGAGCTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgttttgcggccctat < 1:2834835‑M1/149‑71 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatc < 1:300473‑M1/150‑72 (MQ=255) gggCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcg > 1:3677015‑M2/1‑147 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcg < 1:1297734‑M1/150‑75 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGGGTGGCGATAGGGCCGCAAAGCGGGCCCGACACATCAAGCGGCGCAGCGGAAAGCCTGGGGCTGCTGTGCGGCCCAGtcgcg < 1:5040422‑M2/150‑6 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCCTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGCCAATTCAAGCGGCGAAACGGAAAGCCGGGGGGAGCTGTGCCGCCCGGtcgcg < 2:475246‑M2/150‑6 (MQ=255) catggggAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa < 1:1609651/147‑1 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgac < 1:4408169‑M1/150‑77 (MQ=255) ggggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgc < 2:5531117‑M2/150‑10 (MQ=255) ggtgaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCaa < 1:4522785/147‑1 (MQ=255) tgatGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCTATCGGGCCGCACAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:734476‑M2/2‑137 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:2171185‑M2/1‑137 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:2171188‑M2/1‑137 (MQ=255) gaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCAACGCGGCCCCGACAATTCCCGCGGCGACGCGGAAAGCCTGGGGCGGCGGTGCCGCCCTGtcgcgacgcaaggc < 2:5106950‑M2/150‑15 (MQ=255) ggTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGCTAGGGCCGCAAAGCGGGCCCGCCACGTCAAGCGGCGGAGCGGGGAGCCGGGGGCGGCGGTGGAGCCCGGTCGCGGCGCGCGGCCGCGcc > 2:1640877/1‑150 (MQ=255) ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGAc > 2:3621885/1‑150 (MQ=255) cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCGGAAAGCCTGGGGCTGCGGTGCCGCCCTGTCGCGACGCCAGGCCGCTCCCACAAAGAcc > 2:1834852/1‑150 (MQ=255) atctACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGGGCAGCCCTGTCGCGACGCCAGGCCGCTCCCCCAAAGACCGCGCAGATCAGTg > 2:2168910/2‑150 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGAGGCGAAGCAGAAACCCAGGGGCTGCTGTGCAGCCCAGTCGCGACGCAAGGCCGCTCCCACAAATACCGCGCAGATCAGTGGAt > 2:4206578/1‑150 (MQ=25) tACGCGGAAAGTGTGGGAGCGGCCGTTCGTGGCGGTATGGCCCCCAAGCGGCCCCCACCAATCAACCGGCGAAGCTGTAAGCCTGGGGCTGGGGGGCAGCCCTGGCGCGACGCAAGGCCGCTCCCCCCAAGCACGCGCCGCTAAGTGGAt > 2:5172560/1‑150 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCATGCCTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATAAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGGGCAGCCCAGTCGCGACGCAAGGCCGCTCCCCCCAAGACCGCGCCCATAACTGGAt > 2:5172604/1‑150 (MQ=25) ggAAAGTGTGGGCGCGGCGTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCCAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGATGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAccc < 2:5097144/150‑1 (MQ=37) tgggtgggGCCTTGGGTCGCTActgggctgcacagcagcccctggctttcagcttcgccgcttgatttgtcggggccgcttggcggccatatggcgacgaaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttca < 2:1979007‑M1/150‑129 (MQ=255) tgGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGAAGCTGAAAGCCTTGGGCTGCAGTGCAGCCCAGTCGCGACGCAAAGCCGCGCCCACAAAGACCCCGCACATAAGTGGAACACCCAGcacaac > 2:2681591/1‑148 (MQ=25) ggAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGAACCTGAAGGCCAGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACCAAGACCGCGCAGATCAGTGGATAACCCACCTCAacac > 2:1228058/1‑150 (MQ=37) gCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatc > 2:2781507‑M1/1‑14 (MQ=255) gCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgcgttgcggcccaatcgcgacgcaaggccgctcccacacagtccgcggagagcgggtctctatcgggcgttcacccgcaac > 1:2819441‑M1/1‑14 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:4414966/1‑150 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:3841226/1‑150 (MQ=255) gCCTTGCGTCGCGATACGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGTCCTCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAACCACAg > 2:3841560/1‑150 (MQ=255) ccTTGCGTCGCTATTGGCCCGCAACGCGGCCCCGAAAATTCAAGCGGCGAAGCTTAAAGCGTGGGGCTGGTGTGCAGCCCTGTCGCGACGAAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc < 2:4355945/150‑1 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2310893/1‑150 (MQ=255) ccTTGAGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacacattccgcgtagagagggtctctagcgggctttcaccgtcatct > 2:4561160‑M1/1‑13 (MQ=255) cTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgcttttcggccctatcgcgacgcaaggccgctcccacacgttacccgtagatcgggtctctagcgggggttcaccgtcaaata > 1:228253‑M1/1‑12 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGTGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 1:8139/1‑150 (MQ=255) agcGTCGCGAcagggctccacaccacccccaggatatcagcttcgccgctcgaattgtcggggccgctttgcggcccaaccgcgacgaaagcccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccc < 2:3617344‑M1/149‑141 (MQ=255) gCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctcccc < 2:5531117‑M1/150‑142 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 1:5440040/1‑150 (MQ=255) tCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttg > 2:2193562‑M1/1‑6 (MQ=255) tCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCa > 1:5606731/1‑150 (MQ=255) tCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCa > 1:2797237/1‑150 (MQ=255) | TGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCA > NC_002947/667930‑668228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |