| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,110 | T→A | 11.7% | intergenic (+71/+81) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,110 | 0 | T | A | 11.7% | 417.1 / 5.8 | 155 | intergenic (+71/+81) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (63/67); new base A (19/3); total (84/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.48e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 156 total aligned reads displayed.
GCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCG > NC_002947/667961‑668255 | gcAGGTCGATTCGATGTACGGGCCGAACCTGCTGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGTGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAt < 2:2582339/150‑1 (MQ=39) cGAATCGATGTACCGGCCGAACCTGCAGGCGGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAgc < 1:377049/150‑1 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAAATCAAgcg > 2:2052144/1‑150 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATATGGCCGCCAAGCGGCCCCGCCCATTCAAgcg > 1:4114361/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcgg > 2:4356142/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcgg < 2:5384063/150‑1 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGGGCGATAGGGCCGCCAAGCGGGCCCGCCCAATCAAgcgg > 1:150530/1‑150 (MQ=255) gATGTACCGGCCGAACCTGCAGGCGGTGGGCGTTGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGaa < 2:2013388/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg < 2:1263274/150‑1 (MQ=255) tACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAATTAAAGCGGCGAAGCTg > 2:3002802/1‑150 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGaa < 2:5468874/150‑1 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGCCAAATCAAGCGGCGAAGCTGaa > 2:508111/1‑150 (MQ=255) cGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa < 2:3928585/150‑1 (MQ=255) gCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCCGCGCGCTAGGGCCGCCAAGCGGCCCCGCCCAATCAAGCGGCGCAGCGGAAAGc > 2:4425715/1‑150 (MQ=255) cGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCt < 2:2733046/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 1:1280900/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:4009135/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc > 1:5354457/1‑135 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:605854/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCGGAAAGCCTg > 2:1309580/1‑150 (MQ=255) ccccTGCCGGCCGGGGGCGCTGGGCACGGGGAGAGGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGGGGGCGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1502895/148‑1 (MQ=255) acccTGCAGGCCGTGGGCGTTGGGCATGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGTAATGTGTGGGAGCGGCCTTGCGTCGCTATTGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:4858314/148‑1 (MQ=38) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:2232763/150‑1 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGTCGCGATAGGGCCCCAAAGCGGCCCCGACAAATAAACCCGCGAACCAGAAAGACAggg > 1:5266940/1‑150 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTggg < 2:2736370/150‑1 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCCATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCCAAGCGGAAAGCCAGGGgc > 2:4821848/1‑150 (MQ=39) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCACAGCGGCCCCGACCATTCAAGCGGCGAAGCTGAAAGCCTggggg > 2:3904106/1‑149 (MQ=255) tGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGGGGCGGGGCGCTGGGGCCGCACGGCGGGCCCCCCCCATCAAGCGGCGCCGCGGGAGGCCGGGGgcg > 1:5425327/1‑149 (MQ=255) aGGGCGTGGGCGATGGGCAAGGGTTGTTGTGGGTGAAAGCCCGCTTGATCCCCGGTATACGGTGAATGTGTGGGTGCGGGCTTGGGTCGCGTTGGGGCCGCAAAGGGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 1:397866/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCATGGGTAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCTATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 1:2606763/150‑1 (MQ=255) ccGTGGGGTTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:3479100/150‑1 (MQ=255) ccGTGGGCTATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:5569447/150‑1 (MQ=255) ccGTGGGCGTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGGAATGTGTGGGAGCGGCCTTGCGCCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:3870283/150‑1 (MQ=255) gTGGGCTATGGGCAAGGGTAGATGACGTTGAAAGCCCGCTAGATACCCGCTCTACGCGTAAAGTTTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:2233514/150‑1 (MQ=38) gTGGGCGTTGGGCAAGGGGATATGACGGTGAACGCCCGCTAGAGACCCGCTCTCCGGGGAAAGTGTGGGCGCGGCCTTGGGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:1046523/150‑1 (MQ=255) gTGGGCGTGGGGCATGGGGAGATGCGGGTTAAAGCCCGCTAGAGACCCGCTCTAGGCGGAAAGTGTGGGCGCGGCCTGGCGTCGCTATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:477941/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:3165011/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 2:4358450/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa > 2:3304674/1‑150 (MQ=255) cgttGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 2:4166679/147‑1 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGTTGGGGGGGGGTTGGGGCGGGTAGGGGGGCCGGCAATTCAAGCGGGGAAGCTGATAGGCTGGGGGTGGTGTGGGGCCCt > 1:4671530/1‑150 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 2:1608281/150‑1 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGCTAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGAAGCGGCAAGCCTGGGGCTGCTGTGCAGcccg > 2:4847493/1‑149 (MQ=255) gATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGCAGCTGAAAACCAGGGGCAGCGGTGCAGcccag > 1:4617969/1‑148 (MQ=38) gggCATGGGGAGATGACGGTGAAAGCCCGCTAGAGCCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCACAGCAGccccaggc < 2:4329782/150‑6 (MQ=37) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGGGTGGCGATAGGGCCGCAAAGCGGGCCCGACACATCAAGCGGCGCAGCGGAAAGCCTGGGGCTGCTGTGCGGCCCAGtcgcg < 1:5040422‑M2/150‑6 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCATGCGTCGCGCTAGGGCCCCAAATCGGCCCCCACAAAAAAATCGGCGAAGCAGAAAGCCAGGGGCGGCTGTGCAGCCCAGgcgcg < 2:1885696‑M2/150‑6 (MQ=255) catggggAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa < 1:1609651/147‑1 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga > 2:2193562‑M2/1‑144 (MQ=255) ggggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgc < 2:5531117‑M2/150‑10 (MQ=255) ggtgaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCaa < 1:4522785/147‑1 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCTCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgactcaagg > 2:4561160‑M2/1‑137 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 1:2171185‑M2/1‑137 (MQ=255) gaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggc > 2:2781507‑M2/1‑136 (MQ=255) cccccGCTCGACACCCGCTCTACGGGTAATGTGGGGGGGCGGCGTTGGGACGCGATGGGGCCGCAACGCGCCCCCGACAATGCCCGCGGCGAAGGTTAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACaaa < 2:3625191/148‑1 (MQ=255) ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGAc > 2:3621885/1‑150 (MQ=255) cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCCATAGGGCCCCAAAGCGGCCCCCACAAAACAAACGGCCGAGCTGCAACCCGGGGGGCGCTGTGCCCCCCGGTCGCGCCGCAACGCCGCTCCCCCAAAGAcc > 2:747575/1‑150 (MQ=255) gCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCCGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCGGTCGCGACGCCAGGCCGCGCCCCCAAAGACcg > 2:148562/1‑150 (MQ=37) gCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa > 1:1643540/1‑113 (MQ=255) gCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 2:1643540/113‑1 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGAGGCGAAGCAGAAACCCAGGGGCTGCTGTGCAGCCCAGTCGCGACGCAAGGCCGCTCCCACAAATACCGCGCAGATCAGTGGAt > 2:4206578/1‑150 (MQ=25) tACGCGGAAAGTGTGGGAGCGGCCGTTCGTGGCGGTATGGCCCCCAAGCGGCCCCCACCAATCAACCGGCGAAGCTGTAAGCCTGGGGCTGGGGGGCAGCCCTGGCGCGACGCAAGGCCGCTCCCCCCAAGCACGCGCCGCTAAGTGGAt > 2:5172560/1‑150 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCGTGCCTCGCGATAGGGCCGCAAAACGGCCCCGACAAAGCAAGCGGCGCAGCGGGAAGCCGGGGGCGGCGGGGCAGCCCGGGGGCGACGCAACGCCGCGCCCCCCAAGAACCCCCAGAGCAGGGGAt > 2:577723/1‑150 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCATGCCTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATAAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGGGCAGCCCAGTCGCGACGCAAGGCCGCTCCCCCCAAGACCGCGCCCATAACTGGAt > 2:5172604/1‑150 (MQ=25) gcgGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAc > 2:4632490/1‑150 (MQ=255) ggAAAGTGTGGGCGCGGCGTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCCAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGATGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAccc < 2:5097144/150‑1 (MQ=37) ggAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGAACCTGAAGGCCAGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACCAAGACCGCGCAGATCAGTGGATAACCCACCTCAacac > 2:1228058/1‑150 (MQ=37) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:4414966/1‑150 (MQ=255) gCCTTGCGTCGCGATACGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGTCCTCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAACCACAg > 2:3841560/1‑150 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2310893/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGTGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 1:8139/1‑150 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctcccctt < 1:4408169‑M2/150‑75 (MQ=255) tCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCa > 1:5606731/1‑150 (MQ=255) tCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCa > 1:2797237/1‑150 (MQ=255) ccgtttcgggCCGAAACGCGCCCCCCAAAATACATGCGGCGAAGCTGAACGCCGGGGGCTGCTGAGCCGCCCGGCCCCCACCCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAc < 1:5568022/143‑1 (MQ=255) cgATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgccc < 1:930167‑M2/150‑79 (MQ=255) cgATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcca > 2:1224046/1‑150 (MQ=255) gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgccca < 1:300473‑M2/150‑80 (MQ=255) gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccag > 2:1837656/1‑150 (MQ=255) aTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccat < 1:2834861‑M2/150‑81 (MQ=255) aTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagc > 1:3648305/1‑150 (MQ=255) aTAGGGCCGCAAAACGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcagctccccgtgcccag < 1:2834835‑M2/150‑81 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGAGCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 2:3117263/2‑150 (MQ=255) gggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagccag > 1:3224188/1‑150 (MQ=255) gggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagccag > 1:986668/1‑150 (MQ=255) ggCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGCCGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga < 2:3177926/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGGGGCTAAGATGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga < 2:3177994/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAc < 1:4987189/95‑1 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAc > 2:4987189/1‑95 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 1:1022238/1‑150 (MQ=255) cGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTAtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgcccac < 1:1556057‑M2/150‑88 (MQ=255) gCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat > 2:5302724/1‑150 (MQ=255) cAAATCGGCCCAGACAATTCAAGCGGCTAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTTTCGCGAAGCAAGGACGCTCCAACAAATACCGCTCAGATCAGTGGATAACCCAGCTCATCACAAACAGCACCAGCACCAGCCAGATGAtt > 1:1203352/1‑150 (MQ=255) aGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCg > 1:4150568/1‑150 (MQ=255) gCCCCTACAATTCAAGCGGCGACGCTGAACGCGTGGGGGTGGTGTGCCGCCGTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGga < 2:5425327/150‑1 (MQ=255) ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatga > 2:4958227/1‑150 (MQ=255) ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatga > 2:1662244/1‑150 (MQ=255) gACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCATCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAACCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATc > 2:448165/1‑150 (MQ=255) gACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGt > 1:633463/1‑91 (MQ=255) gACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATc > 2:2928783/1‑150 (MQ=255) | GCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCG > NC_002947/667961‑668255 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |