| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,936 | G→A | 9.3% | intergenic (+31/+146) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,936 | 0 | G | A | 9.3% | 631.3 / 40.3 | 221 | intergenic (+31/+146) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (92/106); new base A (15/5); total (107/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.63e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
GAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAA > NC_002947/867789‑868085 | aaGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGC < 1:638672‑M1/150‑1 (MQ=255) aaGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCACTTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGC < 1:1272662‑M1/150‑1 (MQ=255) aGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCC > 2:5190678‑M1/1‑150 (MQ=255) tGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCcc > 1:778661‑M1/1‑148 (MQ=255) cctggacctggaCGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCccacc > 2:272730‑M1/1‑145 (MQ=255) cctggacctggaCGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCgaa < 2:647139‑M1/150‑4 (MQ=255) cctggacctggaCGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCC < 2:4128034‑M1/150‑1 (MQ=255) cctggacctggaCGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCC > 1:5552488‑M1/1‑150 (MQ=255) ctggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCgaag < 1:1451159‑M1/150‑5 (MQ=255) ctggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCC < 1:3515630‑M1/150‑1 (MQ=255) tggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCTCA < 1:2544772‑M1/150‑1 (MQ=255) tggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCA > 2:470107‑M1/1‑150 (MQ=255) gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACA < 1:2934325‑M1/150‑1 (MQ=255) gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACA < 1:564389‑M1/150‑1 (MQ=255) cggccctggacctggcagagagcagcccggcggccaagcactacgattaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatctgtagccagtgccggCCTCTTCGCGGGCGCGCCCGCTCCcaca > 1:5393437‑M1/123‑150 (MQ=255) acctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAG < 1:3549653‑M1/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 2:3854110/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 1:221421/150‑1 (MQ=255) tggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGgg > 2:1957416‑M1/1‑148 (MQ=255) tggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCCCGCCCCCAGGAg > 2:622055/1‑150 (MQ=255) ggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATATGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGt < 1:4994286/150‑1 (MQ=255) gacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCA > 2:3885576‑M1/1‑142 (MQ=255) gacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCA < 1:3885576‑M1/142‑1 (MQ=255) acGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTcg < 2:5034311/150‑1 (MQ=255) cGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTcgc < 2:1806896/150‑1 (MQ=255) gCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCgcgc < 2:342896/150‑1 (MQ=255) gCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGAGTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCGGATCTGTAGCCAGTGCCGGCCTCTGCGCGGGCGCGCCCGCGCCCACAGGAGTCgcgc > 2:1647973/1‑150 (MQ=255) aaGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGcgccg > 2:3625961/1‑150 (MQ=255) aGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGcgccgc < 2:3585103/150‑1 (MQ=255) gACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGTGCCCGCTCCCACAGGttcggtaatgccc > 1:279523‑M1/1‑137 (MQ=255) aGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGc < 1:3339349/150‑1 (MQ=255) gCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCg < 2:1178937/150‑1 (MQ=255) cACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCgg < 1:2922603/150‑1 (MQ=255) cAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGAGTCGCGCCGCACCAGCGGG‑Caat > 2:1042990/1‑148 (MQ=255) cccggcggccaagcactacgcttaagccggtccgcaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCACTTCGCGGGCAGGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTAc > 1:1805957‑M1/95‑150 (MQ=255) aGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTAc < 2:478665/150‑1 (MQ=255) cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGaa < 2:820622/150‑1 (MQ=255) cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTC > 2:3453109‑M1/1‑113 (MQ=255) tcgtcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCa > 2:5055784/1‑130 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgt > 2:391394‑M2/1‑145 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgt > 2:3757443‑M2/1‑145 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgt < 2:1534000‑M1/150‑36 (MQ=255) caagcactacgcttaagccggtctgaaacgcataaacgcccctcggggcgtttattgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTTCGGG‑CATTACCGAACCtgt > 1:3210082‑M1/86‑150 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCTGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtg > 1:4544690‑M2/1‑144 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGTGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtg < 2:279523‑M1/150‑37 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtg < 1:5276817‑M1/150‑37 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtg > 1:3650059‑M2/1‑144 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtg > 2:5199807‑M2/1‑144 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtg < 2:1384585‑M1/150‑37 (MQ=255) aagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCACGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCtgtg > 1:3423178‑M1/85‑150 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgg > 2:4647441‑M2/1‑143 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCACCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCCAAccggtgg < 2:1237217‑M2/150‑8 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTgg > 1:1497836‑M1/84‑150 (MQ=255) gCAGATTGCCGACCCGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtggga < 1:3659683‑M1/150‑40 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGa > 2:4319582‑M1/82‑150 (MQ=255) ctccgcttacgccggtctgaaacgcaacaacgcccctcggggcgttttttgggcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGc > 1:2353570‑M1/80‑150 (MQ=255) aGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgggagc > 2:3523044‑M2/1‑139 (MQ=255) gacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCg > 2:4463219‑M1/79‑150 (MQ=255) aTTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgggagcgg > 2:2180426‑M2/1‑137 (MQ=255) ttGCCGACCAGTGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgggagcggg > 1:2715176‑M2/1‑136 (MQ=255) cGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCTGCTCCCCCAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgggggagcgggcctg < 2:5359878‑M2/150‑19 (MQ=255) aagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGc > 2:2943629‑M1/72‑150 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa < 2:693869/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa < 1:470107/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCCCCGCACCAGCCGG‑CATTACCGAAcctgtgggagcgggccagcccgcgaa < 2:5318947‑M2/150‑27 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCTCCCCCCCGAGTCGCGCCGCACCTGGGGG‑CCGTACCGAACCCGTGGGAGCGGGCAAGCCcgcgga > 2:5318944/1‑148 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCcgctccca < 1:2484093/150‑6 (MQ=255) gCCCCTGAGTACATCTAGATAATGGATAAAGCCCGTGGGTGATCTTTAGCCAGTGCCGGCATCTTCGGGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAggg < 1:1588855/150‑1 (MQ=255) cgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCACGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg > 2:2452178‑M1/58‑150 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCGGCGGG‑CATTACCGAACCTGTGGGGGCGGGCAAGCCCCCGAAGAGGGCg > 2:2754255/1‑150 (MQ=255) ccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCGCTCCCACACGACTAGCGCCGCCCCAGCCGG‑CAATACCCAACCGGTGGGAGCGGGCAAGCCCCCGAAGAGGGCgg > 2:5277939/1‑150 (MQ=255) cTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCGTCGCGGGCGCGCCCCCACCCACACGGGTCGCGCCGCACCAGCGGG‑CATTACCGAACCGGTGGGAGCGGGCAAGCCCCCGACCAGGGCggg > 2:4305716/1‑149 (MQ=255) aGTACAGCGAGATCATCGATACAGCCCGGGGCTGCTCTGTAGCCCGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGG‑CATGACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACa < 2:5380704/150‑1 (MQ=255) gTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAg < 2:3154980/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGGGGGAGCGGGCCTGCCCGCGAAGAGGGCGGTACAGGCTg > 2:4558877/1‑150 (MQ=255) tcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGcc < 2:3237088/150‑1 (MQ=255) cccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaa < 1:5023494/150‑1 (MQ=255) gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTAc > 2:1454787/1‑81 (MQ=255) ttatgtGTAGCCTGTGCGGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑AATTACCTAACCTGTGGGAGGGGGCTTGCCCGGGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGccc < 1:309231/145‑1 (MQ=38) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCAGGCGGCGCGCCGCACCAGCGGGCCATAACCG‑ACCGGTGGGGGCCGGCCAGCCCCCGCAGAGGGCGGGGCAGGCGGATCAACCCCCCCGCACAAAAAAAGccc > 2:4764496/1‑150 (MQ=255) tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGa < 2:2891148/150‑1 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGTTCAAGCGCCAGGCACAAAAAACGcccctcggg < 2:4926591/150‑6 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACAGGAGTCGCCCCCCACCAGCGGG‑CAATACCCAAACGGGGGGGGCGGGCCAGCCCCCCGAGAGGGCGGTACCGGCGGATGAAACCCCACGCACAAAAAAACccccccggg > 2:3025691/1‑145 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACACGGGTGGCCCCCCCCCCGCGGGCCATAACCCAACC‑GGGGGGGCGGGCCAGCCCGCCCCGGGGGCGGGACAGGCCGTAGCAGCCCCCGGCCCAAAAAACCCCCCCAggg > 2:2360805/1‑150 (MQ=255) gTAGCCAGTGCCGGCCTCCTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCCCCGCACCAGCGGG‑CAATAACGAACCAGGGGGCGCGGGCATGCCCCCCAAGAGGGCGGTACAGGCGGAAAAAGCGCCCGGCACAAAAAACGCCCCCAggg > 2:3994105/1‑150 (MQ=255) tgTGCGGGCCTGTGCGGGGGCGCGCCCGCTCCCCCCGGCGGCGCGCCGCACCTGCGGG‑CATTCCCGACCCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttt < 1:1214430/149‑1 (MQ=255) ggCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 1:882415/149‑1 (MQ=255) ccGGCCTCGGCGCGGGCGCGCCCGCGCCCACCGGAGTCGCGCCGCACCTGCGGG‑CAGGACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCAC‑AAAAACGCCCCTCGGGGCGttttttgt < 2:2841837/150‑4 (MQ=255) CCTCTGCGCGGCCGCGCCCGCCCCCACAGGAGTCGCGCCGCACCTGCGGG‑AATTACCGAACCTGTGGGCGCGGGCAGGCCGGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt > 1:3932607‑M1/1‑150 (MQ=255) CTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc > 2:2500512‑M1/1‑150 (MQ=255) CTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc > 2:778661‑M1/1‑150 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAccggtgggagcgggcacgcccccgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcatt < 2:3250032‑M2/150‑93 (MQ=255) ttCGCGGGCGCGCCCGCGCCCACACGAGTCGCGCCGCACCAGCGGG‑CCATACCGAACCGGGGGGAGCGGGCATGCCCGCGCCGAGGGCGGTACAGGCTTATAAAGCGCCCGGCACAAAAAACGCCCCGAGGGGCGGTGTTGCGTTTgaga > 2:1392622/1‑150 (MQ=255) TCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGGGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAc > 2:2440664‑M1/1‑150 (MQ=255) gGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCgg > 1:4171759‑M1/2‑150 (MQ=255) cgGGCCCGCCCCCTCCCCCCGCCGTCGCGCCGCCCCTGCGGG‑CATTACCGAACCGTTGGCCGCGCGAAGCCCCGCCAAGAGGGCGGTACAGGCTGATCACGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCgg < 1:1957416/150‑1 (MQ=255) GGGCGCGCCCGCTCCCCCCGGAGGCGCGCCGCACCTGCGGG‑CATTCCCGAACCTGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGc > 1:272730‑M1/1‑150 (MQ=255) gcgcCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa < 2:2116503/150‑1 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa > 1:3484542/1‑150 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa < 2:5552488/150‑1 (MQ=255) | GAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAA > NC_002947/867789‑868085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |