| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 883,809 | T→G | 10.8% | intergenic (+44/‑284) | PP_0766 → / → PP_0767 | hypothetical protein/LuxR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 883,809 | 0 | T | G | 10.8% | 326.8 / 24.0 | 111 | intergenic (+44/‑284) | PP_0766/PP_0767 | hypothetical protein/LuxR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (22/77); new base G (2/10); total (24/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
GCCCTTGGGATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCC > NC_002947/883661‑883954 | gCCCTTGGGATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTc < 1:163945/150‑1 (MQ=255) ttGGGATGAAGAACGAAGAGATACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCTCAGAACGCCCCGGCTCGCCg < 2:2055057/150‑1 (MQ=255) ttGGGATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCg > 2:2548445/1‑150 (MQ=255) ggATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCgggg < 1:4409743/150‑1 (MQ=255) ggATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCgggg < 1:1573313/150‑1 (MQ=255) ggATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCgggg < 1:2362419/150‑1 (MQ=255) gATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGc < 1:4134798/150‑1 (MQ=255) gATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGc < 1:4011719/150‑1 (MQ=255) gATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCGGGGc < 1:793841/150‑1 (MQ=255) gATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCGGGGc < 2:3405356/150‑1 (MQ=255) aTGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCGGGGCg < 1:5329036/150‑1 (MQ=255) aTGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCGGGGCg < 1:3695370/150‑1 (MQ=255) gaagaaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCGGGGCGtt < 2:333019/150‑1 (MQ=255) aagaaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGttt < 1:3287947/150‑1 (MQ=255) aagaaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGttt < 1:2787043/150‑1 (MQ=255) aagaaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGttt < 2:1028327/150‑1 (MQ=255) aagaaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGttt < 1:2787160/150‑1 (MQ=255) aaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGttctgg < 1:794021/150‑5 (MQ=255) aaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTa < 1:884005/150‑1 (MQ=255) aaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTa > 1:4313949/1‑150 (MQ=255) aaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTa < 2:5541964/150‑1 (MQ=255) aaCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTGTCTa > 1:4313858/1‑150 (MQ=255) aCGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCGAGCCGGGGCGttctggg < 1:1780518/150‑6 (MQ=255) gAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTAttt < 1:3502526/150‑1 (MQ=255) aaGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTc < 1:550207/150‑1 (MQ=255) aaGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAATCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTc < 1:2484371/150‑1 (MQ=255) gagaAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCt < 1:1736784/150‑1 (MQ=255) aaaCGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGAc < 2:1360191/150‑1 (MQ=255) aCGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGAccc < 1:594040/150‑1 (MQ=255) aCGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTGCCttgccc < 2:837476/150‑6 (MQ=255) tGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGc < 1:4908081/150‑1 (MQ=255) ccTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCct < 2:3320321/150‑1 (MQ=255) tACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCctct > 1:5456409/1‑150 (MQ=255) tACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCctct > 1:5456511/1‑150 (MQ=255) aCGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCtt > 2:740337/1‑150 (MQ=255) cGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTc < 2:5557963/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCgg < 2:4160310/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCgg < 2:1561328/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCgg < 1:252147/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCgg < 2:1561299/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCgg < 2:2769064/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCgg < 2:2783771/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCACTTCGCgg > 1:5029991/1‑150 (MQ=255) cGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGt < 2:1820679/150‑1 (MQ=255) cGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGt < 1:2317807/150‑1 (MQ=255) ggCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTg < 1:3915365/150‑1 (MQ=255) ggCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTg < 1:3915358/150‑1 (MQ=255) cTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGaa < 2:3266097/150‑1 (MQ=255) cTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGaa < 1:296257/150‑1 (MQ=255) gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc < 2:235713/150‑1 (MQ=255) gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc < 1:3470327/150‑1 (MQ=255) gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc < 1:2655271/150‑1 (MQ=255) gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc < 2:5582365/150‑1 (MQ=255) gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc < 2:2531189/150‑1 (MQ=255) gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc < 2:1377282/150‑1 (MQ=255) ccAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTcc < 1:5192886/150‑1 (MQ=255) cAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCt < 2:288251/150‑1 (MQ=255) cAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTGTCTATTTCCTGACCCGGCCTCTTCGCGGGTGTAcccccaccc > 1:4150029/1‑144 (MQ=255) gCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTAc < 2:4136371/150‑1 (MQ=255) cAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 2:4883136/150‑1 (MQ=255) cAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 2:615102/150‑1 (MQ=255) cAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 2:4082341/150‑1 (MQ=255) cAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 1:924121/150‑1 (MQ=255) cAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGGGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCCATTTCCGGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 1:942277/150‑1 (MQ=255) ccGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAccgcgga > 2:1301419/1‑144 (MQ=255) tttCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCcgcg < 2:2578397/150‑1 (MQ=255) tttCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCACCGCCCGGTGCcgcg > 2:4289401/1‑150 (MQ=255) ttCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCgg < 1:740337/150‑1 (MQ=255) tCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGt < 2:1462816/150‑1 (MQ=255) cAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAg < 1:993141/150‑1 (MQ=255) aGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGGGGACCCGCGCCGACCGGGGCCGCGGGAgg > 2:369577/1‑150 (MQ=255) gCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGa > 2:3190704/1‑150 (MQ=255) ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGc < 2:1838098/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGCgg < 2:4405082/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCcgcg < 1:4737074/140‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCcgcg > 2:4737074/1‑140 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:4546765/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:4164825/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCCCTCCAACACGTTCCGCGGGAGGAGCgg > 2:3135422/1‑150 (MQ=255) cAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCggg < 2:3878957/150‑1 (MQ=255) aGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGt < 2:761792/150‑1 (MQ=255) gcgcTGCGTCAGTCGGGTATTCGCTAAGCTGACATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTAGTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGtt < 2:5051919/150‑1 (MQ=255) gcgcTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTAGTTCCTGACCCGGCCGCTTCGCGGGTGAACCCGCGCCGCCCGGGTCCGCGGGAGGAGCGGGtg > 2:1374678/1‑149 (MQ=255) cgcTGCGTCCGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCTCTCCTACCGGTTCCGCTGTAGGAGCGGGTTc < 2:4727663/150‑1 (MQ=255) gcTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGGACCCCCGCCAACAGGGTGCGCGGGGGGAGCGGGGTCa > 1:4135406/1‑150 (MQ=255) gCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCACCTAAAGGTTGCGCGGGAGGGGCGGGGTGAccc > 1:4211480/1‑150 (MQ=255) aGTCGGGTATTCGATAAGCTTAAATCAGTGAACGCCGTGTGATCCCCACAACGCCCGGGCTCGCGGGGGGGTTTATATTTCCTGCCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTTGGAGCGGTTTCACCCGCGaa < 1:2216047/150‑1 (MQ=37) tCGGGTCTTCGCTAAGCTGAAATCACTGAACGCCGTGTGACCCCCACCACGCCCCGGCTCGCCGGGGCGTTTATATTGCCGCACCCGGCCTCTGCGCGGGTGAACCCGCGCCTACCGGTTCCGGGGTTGTAGGGGGTACACCCGCGAaga < 2:3365696/150‑1 (MQ=255) tCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAaga < 2:5627599/150‑1 (MQ=255) gcGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCATAACGCCCCGGCTCGCCGGGGCGTTTATATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTCCCGCGGTAGTAGCGGTTTCACCCGCGAaga < 2:4852238/149‑1 (MQ=38) gggTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGTCCGCGGTATGAGCGGGTTCACCCGCGAAgggg > 2:4148103/1‑150 (MQ=255) aacccccTGACCGCCGTGTGAGCCCCCGACCGCCCCGGCGCGCGGGGGCGTTTCTTTTGCCGGCCCGGGCCTCTGCGGGGGTGACCCCGCCCCTCCGGGTTCGGCGGTTGGCGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCaa < 2:1981880/144‑1 (MQ=255) gCCGTGTGATCCCCAGACCGCCCCGGCTGGCCGGGGCGTTTCTTTTTCCTGACCCGGCCTCTTCGGGGTTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGGGGGTACACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATAc < 2:4313858/150‑1 (MQ=38) gCCGTGTGAGCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATGTCCTGACCCGGCCTCTGCGCGGGTGAACCCGCGCCTACCGGTTCCGCGGTAGGAGGGGTTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATAc < 2:4313949/150‑1 (MQ=38) gaaaCGCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGa > 2:3944607/3‑86 (MQ=255) aaCGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGGGGACCCGCTCCGACCGGTTCCGCGGGAGGGGCGGGTGCACCCGCGGAGCGGCCGGGCAAGGGGAGCAACCTCCGGGATACCACTCCCAAccccccc > 2:3120384/1‑148 (MQ=255) ccccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCGTCGCGGGTGAACCCGCACCGACAGGTTCCGCGGTGGGAGCGGGTTCACCCCCGAACAGGCCGGGCAAGGCACTCAACCGCCAGAAAACCGCACCAAACCCCCGCCCCa > 2:405260/1‑150 (MQ=255) cccGGCGAGCCGGGGCG‑TTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:5123376/82‑1 (MQ=25) cccGGCGAGCCGGGGCG‑TTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg > 1:5123376/1‑82 (MQ=25) cGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGTACCCCCTCCAAAAGGTGACGCGGTAGGCGCGGGGTGACCCGCCCAGAGGCCCGGCAAGGGAAGCAACCAACAGAAGACCTCAGCAAAACCCCCCCCCAccc > 1:4660135/1‑150 (MQ=255) | GCCCTTGGGATGAAGAACGAAGAGAAACGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCC > NC_002947/883661‑883954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |