| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 955,154 | G→A | 24.0% | intergenic (+105/‑208) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 955,154 | 0 | G | A | 24.0% | 211.2 / 69.1 | 120 | intergenic (+105/‑208) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (41/47); new base A (14/14); total (55/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.97e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
GACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC > NC_002947/955005‑955303 | gACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAgg < 2:3470409/150‑1 (MQ=255)gACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAgg < 2:291667/150‑1 (MQ=255)gACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCGTCGCGGGTTAA‑CCCGCGCCGACCAgg > 1:1239313/1‑150 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTTCGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTc < 2:5178167/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTc < 1:4883569/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTc < 2:2642360/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTc < 1:4536046/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTc < 1:4883634/150‑1 (MQ=255) gCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTc < 1:307008/150‑1 (MQ=255) gCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTcc < 2:1607750/150‑1 (MQ=255) gCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTcc < 2:4707698/150‑1 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCt < 2:1606734/150‑1 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACACACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCGACAAGGTTccg > 2:5504990/1‑149 (MQ=255) ccAGACCGCTGCGGAGGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCt < 2:2577791/150‑1 (MQ=255) cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTg < 2:1789006/150‑1 (MQ=255) cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTg < 2:4465677/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTa < 1:2058413/150‑1 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TATTATTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAga < 2:238713/150‑2 (MQ=25) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGc < 1:3494738/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGc > 2:4643412/1‑150 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCGGTAGGAGc < 2:1678479/150‑1 (MQ=255) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCGCCAACCAGGTTGCGGTAGGGGCg > 2:1939530/1‑150 (MQ=255) gCGGATGTGCTGATGACCTCCGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTTTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCGTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCgg < 1:511058/150‑1 (MQ=37) gCGGATGTGCTGATGACCTACGCACGCTGACACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TATTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCAGGTTCCTGTAGGAGCgg < 1:2609220/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:832771/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:4511407/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCgg < 1:963216/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 2:3871242/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 2:4841917/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCggg < 1:929228/150‑1 (MQ=25) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTCCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 2:1830476/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:2856621/150‑1 (MQ=37) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCggg < 1:3770047/150‑1 (MQ=38) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 2:2509922/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 1:4772386/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 1:324404/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCGTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 1:2695266/150‑1 (MQ=255) gATGTACTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCCCGCCGACCAGGTTCCGGGAGGAGCGGGtt > 2:1913899/1‑150 (MQ=255) aTGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGttt < 2:3590257/150‑1 (MQ=255) tgtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTa < 1:2861260/150‑1 (MQ=255) atgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTGGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGGAAA‑CCCGCTCCGCCCAGGGTCCGGTAGGAGCGGGTTTGCCcgcgc > 2:303870/1‑149 (MQ=255) gaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCAACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAag > 1:5556210/1‑150 (MQ=255) cTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑ACCGCACCCACAGGGACCGGGTTGGCGCGGGTTTAACCCCCAAgggg > 1:5062700/1‑150 (MQ=255) cgcacgcTGAAACTGCTGCCTGTGTCACGAAACCCCCGGCCCCTGGGCCGGGG‑TTTTTTTTTGGGGGTATTTTGCCTGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGccg < 2:5062700/150‑2 (MQ=21) acctgctgCGTGTGTCACGAAACCCCCGGCCACTGTGCCGGGG‑TTTTTTTTGGGGGGTATTTTTCCTGTGCCGGCCTCTGCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGaaaa < 2:4357458/148‑1 (MQ=37) aCTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGgaaaaa < 2:5557505/150‑2 (MQ=17) ccTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCGCCGACAAGGTTGCGGTAGGAGCGGGGTTACCCGCGCAGAGGCCAGCACAGaaaaataaaaaa > 2:4731305/1‑149 (MQ=38) aaaCCCCGGCCCCTGTGCCGGGT‑TTTTTTTTGGGGGGTATTTTTCCGGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACGGTTCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCa < 1:4192554/150‑1 (MQ=37) ccccGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCCCGAAGAGGCCAGCACAGAAAAATAAAAATAACAGATTTTAaaaa > 2:5273588/1‑150 (MQ=255) cccGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCCCACCAAAAAGGTTGCGGGAGGAGCGGGTTTACACGCGAACAGGGCAGCACAGAAAAAAAAAAAAAACAGATTTTGaaaaa > 2:2044172/1‑150 (MQ=255) cccGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑ACCGCTCCTACAAGGTTCCGGTAGGAGCCGGGTTACCCGCGGAGAGGCCAGCCCCGAAAAATAAAAAAACCTGATTTTCaaaaa > 2:2044083/1‑150 (MQ=38) cccGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTAGCGGGTAAA‑ACAGCGCCAACAAGGTTCCTGTAGGTGCGGGGTTACACGCGAGTAGGCCAGCACACAAAAATAAAAAAAACGGATTTTaaaaaa > 2:1424603/1‑150 (MQ=255) cGGCCCGTGGGCCGGGT‑TTTTTTTTTGGGGTTATTTTTCCTGGGCCGGCCTCTCCGCGGGTAAA‑CCCGCTCCTACATGGTTCCTTTTGGAGGGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAAt < 2:4696876/150‑1 (MQ=25) ctggcccGGGG‑ATTTTTTTGGGGGGTATTTTTCCGGGGCCGGCCCGTGCG‑GGGTAAACCCCGCCCCCACCCGGTGCCTGCGGGCGGGGGTTAACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCt < 1:741407/145‑1 (MQ=255) ccGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTTAA‑ACCCCACCAAAAACGTTACGGTTGGAGCGGGGTTAACCCCGAACAGGCCAGCACAGAAAAATAAAAAAAACGGATTTTAAAAAAAAAAATATTaaaa > 1:3221036/1‑150 (MQ=255) gg‑TTTTTTTTTGGGGGTATTTTTCCGGTGCCGGCGTCTTCGCGGGTAAA‑CCCGCTCCTCCACGGTTCGTGTAGGAGCGGGTTTCCCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 2:281057/150‑1 (MQ=38) gttttttttttGGGGTTATTTTCCCTGGGCGGGCCCGTGGGCGGTAAAA‑CCCGCACCAACAGGTTGCCTGTCGGCGCGGTTTAACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 1:2030073/148‑1 (MQ=255) tttttttgGGGTTTATTTTCCCTGGGCGGGCCTCTCCGCGGGAAAC‑CCCCCCCCAACACGTTCCCTGTCGGTGGGGTTTAACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCtaa < 1:1391381/150‑1 (MQ=255) tttCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATc < 2:3517668/150‑1 (MQ=255) tgCCGGCCTCTTCGGGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACa < 2:1037927/150‑1 (MQ=255) ggCCGGCCTCTGCGGGGGTAAA‑CCCGCTCCTACCCGGTTCCTGGAGGAGGGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACa < 2:512062/149‑1 (MQ=38) ggCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCGAATAAAACAGGAAATTATCCTTTACAGGCa > 2:2293415/1‑150 (MQ=255) ttCGCGGGTAAA‑ACCGCTCCTACAAGGTTCCGGGAGGAGAGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTAAAAAAATAGATCAGAAAAGTTCTAATAAAACAGGAAATTAACCTTTAAAGGCATCCTGt > 2:1685743/1‑150 (MQ=38) tccgcgGTAAAA‑CCCGCACCTACACGGTACCTGGTGGCGGTGGTTCACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGt < 1:2049229/148‑1 (MQ=255) gcgGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCCTCCTGTTTc > 2:4653611/1‑150 (MQ=255) gggTACA‑CCCGCTCCTCCACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCgg < 1:5504990/150‑1 (MQ=255) gggTAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCgg > 1:2556438/1‑150 (MQ=37) gTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCa > 1:837404/1‑150 (MQ=255) tAAA‑CCCGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCAc > 2:652168/1‑150 (MQ=37) a‑CCCGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt > 1:495000/1‑150 (MQ=37) a‑CCCGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt > 1:4363236/1‑150 (MQ=37) cccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:3193356/1‑150 (MQ=38) cccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:2065325/1‑150 (MQ=38) cccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 2:885187/1‑150 (MQ=38) cccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 2:1947662/1‑150 (MQ=38) cccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtg > 1:4382928/1‑149 (MQ=255) cccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 2:68563/1‑150 (MQ=255) cccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc < 2:5556210/150‑1 (MQ=255) cccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 2:2940564/1‑150 (MQ=255) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGAt < 2:549604/89‑1 (MQ=18) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGAt > 1:549604/1‑89 (MQ=18) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATGCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:4799909/1‑150 (MQ=37) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCAGCGAAGAGGCCAGCACAGAAATATCAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACCGGAAATTATCCGTTACAGGCATCCTGTTTCGGCACTAtct > 2:3526283/1‑150 (MQ=37) ccGCTCCTACAGGAACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:5021313/1‑150 (MQ=38) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAACTTATCCTTTACAGGCATCCTGTTTCGGCACTAgct > 2:1976664/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:2983335/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:5094165/1‑150 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 2:1239313/150‑1 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:383822/1‑150 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:4005166/1‑150 (MQ=255) cTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttct > 1:249253/1‑150 (MQ=255) ccTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGa < 2:1314005/150‑1 (MQ=255) ccTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGa < 2:2427303/150‑1 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:2924987/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:3581994/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:2413348/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:1504781/1‑150 (MQ=255) aCAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc > 1:1826997/1‑150 (MQ=255) gTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgcc > 2:113445/1‑150 (MQ=255) gTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAGTCAGgcc > 1:3073621/1‑150 (MQ=255) | GACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC > NC_002947/955005‑955303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |