Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,131,569 A→T 7.3% intergenic (‑69/+81) tdcG‑II ← / ← gcvP‑I L‑serine dehydratase/glycine dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,131,5690AT 7.3% 460.4 / 3.9 165intergenic (‑69/+81)tdcG‑II/gcvP‑IL‑serine dehydratase/glycine dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (37/102);  new base T (5/9);  total (48/117)
Fisher's exact test for biased strand distribution p-value = 5.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 172 total aligned reads displayed.

AGCGGCGCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTC  >  NC_002947/1131420‑1131718
                                                                                                                                                      |                                                                                                                                                      
aGCGGCGCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGACGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGa                                                                                                                                                        <  1:880915/150‑1 (MQ=255)
aGCGGCGCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGa                                                                                                                                                        <  1:4195475/150‑1 (MQ=255)
aGCGGCGCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGa                                                                                                                                                        <  2:1679747/150‑1 (MQ=255)
aGCGGCGCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGa                                                                                                                                                        <  1:1966893/150‑1 (MQ=255)
 gcggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAg                                                                                                                                                       <  2:3926602/150‑1 (MQ=255)
 gcggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAg                                                                                                                                                       <  1:266589/150‑1 (MQ=255)
 gcggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAg                                                                                                                                                       <  1:2390891/150‑1 (MQ=255)
 gcggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAg                                                                                                                                                       <  1:2049148/150‑1 (MQ=255)
 gcggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAg                                                                                                                                                       <  2:1328328/150‑1 (MQ=255)
   ggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGt                                                                                                                                                     <  2:1199716/150‑1 (MQ=255)
   ggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGt                                                                                                                                                     <  1:5307576/150‑1 (MQ=255)
   ggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGt                                                                                                                                                     <  2:5206093/150‑1 (MQ=255)
   ggcgCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCCTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGt                                                                                                                                                     <  1:5466712/150‑1 (MQ=255)
        gcATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGc                                                                                                                                                <  2:4950847/150‑1 (MQ=255)
        gcATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGc                                                                                                                                                <  2:4950815/150‑1 (MQ=255)
        gcATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGc                                                                                                                                                <  2:2605798/150‑1 (MQ=255)
         cATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTTGAAGCCAAAGCGGAGGTATATcc                                                                                                                                               >  1:1087251/1‑150 (MQ=255)
              ggCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTGTTACCGCGAATGCGGGGGGAGAGgcaccag                                                                                                                                         >  1:2052944/1‑149 (MQ=38)
               gCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATc                                                                                                                                        <  1:3331855/150‑1 (MQ=255)
               gCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATc                                                                                                                                        <  1:5265431/150‑1 (MQ=255)
               gCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTAACCGCGAAAGCGGAGGTATATCCACCATc                                                                                                                                        >  2:5043174/1‑150 (MQ=255)
                 cGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGc                                                                                                                                      <  2:4380788/150‑1 (MQ=255)
                 cGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGc                                                                                                                                      <  2:2350237/150‑1 (MQ=255)
                 cGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTACCGCCCAAGCCGAGGGAGAGcccccaaccc                                                                                                                                      >  1:2782707/1‑146 (MQ=255)
                  gACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGGTAACCCCGAAATCGGGGGTATAGCCACCCACGCa                                                                                                                                     >  2:1492663/1‑150 (MQ=38)
                       tgtgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTcgc                                                                                                                                <  2:2815105/150‑1 (MQ=255)
                        gtgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTcgcg                                                                                                                               <  2:4105255/150‑1 (MQ=255)
                         tgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCgg                                                                                                                              <  2:1104348/150‑1 (MQ=255)
                         tgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCgg                                                                                                                              <  2:4013329/150‑1 (MQ=255)
                         tgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCgg                                                                                                                              <  2:1850251/150‑1 (MQ=255)
                         tgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCgg                                                                                                                              <  2:4666612/150‑1 (MQ=255)
                         tgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCgg                                                                                                                              <  1:3451964/150‑1 (MQ=255)
                         tgGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCgg                                                                                                                              <  1:4054336/150‑1 (MQ=255)
                               cTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAAc                                                                                                                        <  1:5238555/150‑1 (MQ=255)
                                tGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAAcc                                                                                                                       <  1:4329887/150‑1 (MQ=255)
                                     gggCCGATGCCGATCTTGAACAGGTCGAAGACGCCCTGTGACTTGTGGACCTCCTGCCTGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCTTTCGCGGGTAAACCCGCTc                                                                                                                  <  2:506166/150‑1 (MQ=38)
                                        ccgatgcctatCTTGAACAGGTCGACGACGCTCAGTTACATGTGGACCTCCTGCCAGTTTTTTGGTTGGACATTGAGCCCTGTAGGCGGGGGTTTACCCGCGATTGCGGAGTTATAGCCACCATCGCTTTGGCGGGTAAACCCGCTCCTa                                                                                                               <  2:226261/150‑1 (MQ=255)
                                          gttgcctatCTTGAACAGGTCTAAGACGCTCAGTGACATGTGGACCTCCTGCCTGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGTTTTACCCGCTAATGCGGTGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTaca                                                                                                             <  1:3689206/148‑1 (MQ=38)
                                          gatgccgatCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTaca                                                                                                             <  2:4041559/150‑1 (MQ=255)
                                          gatgccgatCTCCAACAGGTCGACGACGCTCAGTGACATGTGGCCCTCCTGCCAGGTTGTGGGGCGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTCTAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTaca                                                                                                             <  1:3689178/150‑1 (MQ=37)
                                               cgatCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGGGGGGGGATATCCACCAACGCATTCGCGGGTAAACCCGCGCCAACACagac                                                                                                        >  2:5418036/1‑149 (MQ=38)
                                                         cAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGTGGGTAAACCCGCTCCTACACAGAGCCCGCCAccc                                                                                              <  2:3739710/150‑1 (MQ=255)
                                                           ggTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCTGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCTAATGCGGAGTTATAGCCACCATCGCATTGGCGGTTAAACCCGCTCCTACACAGAGCCCGCCACCCaa                                                                                            <  2:1886827/150‑1 (MQ=255)
                                                           ggTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACCTGGAGCCCGGTAGGCGCGGGTGTCCCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCGACACAGAGCCCGCCACCCaa                                                                                            <  2:3517832/150‑1 (MQ=38)
                                                           ggTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCaa                                                                                            <  2:2656487/150‑1 (MQ=255)
                                                            gTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTa                                                                                                                           >  2:1134399/1‑118 (MQ=255)
                                                            gTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTa                                                                                                                           <  1:1134644/118‑1 (MQ=255)
                                                            gTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAAAGCGGAGGTATAGCCACCATCGCATTAGCGGGTAAACCCGCTCCTACACAGAGCCCCCCACCCAAg                                                                                           >  2:5484721/1‑150 (MQ=255)
                                                            gTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTGCCGCCCAGGCGGCGGGATAGCCCCCCCCGCCGGCGCCGGGAAACCCCCCCCCCCCCCGAGcccccccccccac                                                                                           >  1:3090720/1‑147 (MQ=255)
                                                             tCGAAGACGCTCTGTGACTTGTGGACCTCCGGCCAGTTTGTTGGGTGGACTTTGCGCCCTGTCGGCGCGGGTTTACCCGCGATTGGGGAGGTATCCCCACCAGCGCATGCGGGGGTAACCCCGCTCCTACACAGAGCCCGCCACCCAAGc                                                                                          <  1:3849052/150‑1 (MQ=255)
                                                             tCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGc                                                                                          <  2:4745520/150‑1 (MQ=255)
                                                               gAAGACGCTCTGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGCGCCCTGTCGGCGCGGGTTTACCCGCGATTGCGGTGGTATAGCCACCATCGCATTCGCGGTAAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCa                                                                                        <  1:4954120/150‑1 (MQ=255)
                                                               gAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGTTCATTGAGCCCTGTAGGCGCGTGTTTACCCGCGAATGCGGATGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACCGAGCCCGCCACCCAAGCCa                                                                                        <  2:4529181/150‑1 (MQ=38)
                                                               gAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTACCGCCCATGCGGAGGTGTTGGCACCCAACCCAGAGCGGGGAAACCCCCCCCGACACACAGCCCcccacccacaccc                                                                                        >  1:716120/1‑145 (MQ=255)
                                                                     gCTCAGTGACATGTGGACCTCCTGCCAGGATGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTACCCCGAATGAGGCGGTGTTGCCCCCAGCGCCGTAGCGGGTGACACCGCACCGCCACAGCCCCCCCCacccaacccacgagcc                                                                                  >  2:3291369/1‑144 (MQ=255)
                                                                       gcAGTGACATGTGGACCTCCGGCCAGGGTGTTGGGTGGACATGGAGCCCTGTAGGCGCGGGTGTACCCGCGAATGCGGCGGTATCGCCACCAGCGCCTTCGCGGGTAAACCCGCTCCTACACCGCGCCCGCCACCCAAGCCAGGTGGCgg                                                                                <  2:5502342/149‑1 (MQ=37)
                                                                         aGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTCCCCCGAATGCGGAGGTATAGCCCACAACGCATTAGCGGGTAAACCCGCGCCCACACACAGCCCCCCACCCAAACCACGTGGCgggg                                                                              >  2:2413659/1‑150 (MQ=255)
                                                                         aGTGACAGGTGGCCCTCCTGCCAGGTTGTTGGGTGGACATTGCGCCCGGTCGGCGCGGGTTTACCCGCGAAGGCGGCGGTATCGCCACCATCGCATGCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCgggg                                                                              <  1:1748280/150‑1 (MQ=38)
                                                                          gTGACTTGTGGACCTCCGGCCCGGTTGTTGGGTGGACATTGAGCCCTGTCGGCGCGGTTTTACCCGCTAATGCGGAGGTATCGCCACAATCGCTTTCGGGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGa                                                                             <  1:301529/150‑1 (MQ=255)
                                                                            gACTTGGGGACCCCCTGCCTGGTTGTTGGGGGCACATTGAGCCCTGTCGGCGGGGGTTTACCCGCTCATGGGGTGTAATCCCCACCACCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAgg                                                                           <  1:1652918/150‑1 (MQ=25)
                                                                            gACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAgg                                                                           <  2:4137773/150‑1 (MQ=255)
                                                                            gACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTCCCCCCCCTGCGGTGGTCAAGCCCCCCGCGCCATTGCCGGTTAACCCCCGCCGACCCCTCGCCCGCCCCCCCCGCCCCCGGGCGGGGAgg                                                                           >  2:4700226/1‑150 (MQ=255)
                                                                             aCATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAggg                                                                          <  2:1926204/150‑1 (MQ=255)
                                                                             aCATGTGGACCTCCGGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAggg                                                                          <  1:468706/150‑1 (MQ=255)
                                                                                  tgGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATc                                                                     <  2:1676928/150‑1 (MQ=255)
                                                                                  tgGACCCCCTGCCAGGTTGTTGGGTGTACTTTGAGCCCTGTTGGCGCGGTTTTACCGGCTATGGCGGAGGTATAGCCCCCATCGATTTCGCGGTTAACCCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATc                                                                     <  1:4248559/150‑1 (MQ=255)
                                                                                  gggACCTCCTGCCCGGTTGTGGGGTGGACATTGCGCCCTGTCGGCGCGGGTTTACCCGCGACTGCGGAGTTATAGCCACCATCGCTTTCGCGGTAAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATc                                                                     <  1:1494535/149‑1 (MQ=255)
                                                                                    gACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGGTTTCCCCCGAATGCGGAGGGATAGCCAACAAAGCAATAGCCGGGAAAACCCCACCAACACAAATCCCCCCCCCCAAACCCCGGGGCggggggggggaaaag                                                                   >  1:5042336/1‑143 (MQ=255)
                                                                                      cctcctGCCAGGTTGGTGGGTGGACATTGAGCCCTGTCGGCGCGGGTTTACCCGCGAATGCGGAGGTAAAGCCCCCATCGCATCCGGGGCTAACCCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGc                                                                 <  1:1212285/150‑1 (MQ=255)
                                                                                      ccacctgcctgGTTGTTGGGTGGACTTTGAGCCCTGTCGGCGCGGGTTTACCCGCGAATGCGGAGTTATAGCCACCATGGCATTCGCGGTAAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGc                                                                 <  1:1211980/147‑1 (MQ=38)
                                                                                           tGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGTTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCt                                                            <  1:4100536/150‑1 (MQ=255)
                                                                                               aGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATa                                                        <  2:4805156/150‑1 (MQ=255)
                                                                                                 gttgttGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGc                                                      <  2:791642/150‑1 (MQ=255)
                                                                                                       gggTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCtcga                                                <  2:4737122/150‑1 (MQ=255)
                                                                                                          tGGACATTGAGCCCTGTAGGCGCGGGGTTAAACGCGAAATCGGTGGTATAGCCACCCACGCAGTAGCGGGTAAACCCCCTCCAAAACAGAGCCCGCCACCCCAGACACGTGGCGGGGAGGGGTATCAGGCGTCCGGATAGCTCacgctag                                             >  2:1761026/1‑146 (MQ=255)
                                                                                                              cATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACgg                                         <  1:5043174/150‑1 (MQ=255)
                                                                                                                gtGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGc                                       <  2:2904947/149‑1 (MQ=255)
                                                                                                                   aGCCCTTTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAgg                                    <  2:560314/150‑1 (MQ=255)
                                                                                                                               gcgGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGt                        >  2:3318973/1‑150 (MQ=255)
                                                                                                                                  gggTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTg                      >  2:3583182/1‑150 (MQ=25)
                                                                                                                                   ggTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGc                     >  2:4203678/1‑150 (MQ=255)
                                                                                                                                   ggTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGc                     >  1:612377/1‑150 (MQ=255)
                                                                                                                                    gTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCg                    <  1:1286896/150‑1 (MQ=255)
                                                                                                                                    gTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCg                    >  2:501683/1‑150 (MQ=255)
                                                                                                                                         cccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCggg                                                                               <  1:1100811/86‑1 (MQ=255)
                                                                                                                                         cccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGc               <  1:739312/150‑1 (MQ=255)
                                                                                                                                          ccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGcc              >  1:731628/1‑150 (MQ=255)
                                                                                                                                          ccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGcc              <  1:872785/150‑1 (MQ=255)
                                                                                                                                          ccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGcc              >  2:640570/1‑150 (MQ=255)
                                                                                                                                          ccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCACACACCAGGTTGCGGTCGcc              >  2:1110584/1‑150 (MQ=255)
                                                                                                                                           cgcgAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCg             >  1:4331399/1‑150 (MQ=255)
                                                                                                                                                 tGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACg       >  1:215631/1‑150 (MQ=255)
                                                                                                                                                   cGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGtt     <  2:4259361/150‑1 (MQ=255)
                                                                                                                                                    ggAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCtcga                                                <  2:5075893/106‑1 (MQ=255)
                                                                                                                                                    ggAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTg    >  2:5087205/1‑150 (MQ=255)
                                                                                                                                                    ggAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTg    >  2:3982355/1‑150 (MQ=255)
                                                                                                                                                     gAGGTATAGCCACCATCGCATTCGCGGTTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGt   <  2:1087251/150‑1 (MQ=255)
                                                                                                                                                     gAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGt   <  1:3547773/150‑1 (MQ=255)
                                                                                                                                                     gAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGt   <  2:716120/150‑1 (MQ=255)
                                                                                                                                                      aGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTc  <  2:4585078/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
AGCGGCGCGCATCGGGCCGACCGTGTGGGAGCTGGAGGGGCCGATGCCGATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTC  >  NC_002947/1131420‑1131718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: