Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,153,751 A→C 5.3% L150R (CTT→CGT)  PP_1007 ← transmembrane sensor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,153,7510AC 5.3% 844.9 / 22.1 287L150R (CTT→CGT) PP_1007transmembrane sensor
Reads supporting (aligned to +/- strand):  ref base A (134/131);  new base C (7/11);  total (141/146)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 293 total aligned reads displayed.

CCTCGGGGACCTGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGTGGCCACCT  >  NC_002947/1153602‑1153898
                                                                                                                                                     |                                                                                                                                                   
 cTCGGGGACCTGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAg                                                                                                                                                    >  1:2449450/1‑150 (MQ=255)
  tCGGGGACCTGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAgg                                                                                                                                                   <  1:2159536/150‑1 (MQ=255)
    ggggACCTGGAAGTAAGCCTCGCCCTGGAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAggtg                                                                                                                                                 <  2:3877887/150‑1 (MQ=255)
          cTGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCTTACGGTGGTCGGc                                                                                                                                           <  1:4553299/150‑1 (MQ=255)
           tGGATGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGcc                                                                                                                                          <  2:622245/150‑1 (MQ=255)
           tGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGcc                                                                                                                                          >  2:4105241/1‑150 (MQ=255)
           tGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGcc                                                                                                                                          >  2:4630927/1‑150 (MQ=255)
           tGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGcc                                                                                                                                          >  2:4852040/1‑150 (MQ=255)
            ggAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCt                                                                                                                                         <  1:105381/150‑1 (MQ=255)
            ggAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCt                                                                                                                                         >  1:2530610/1‑150 (MQ=255)
            ggAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCt                                                                                                                                         >  1:1105408/1‑150 (MQ=255)
              aaGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGc                                                                                                                                       >  1:503178/1‑150 (MQ=255)
               aGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCa                                                                                                                                      <  2:3794657/150‑1 (MQ=255)
                gTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAg                                                                                                                                     <  1:4650854/150‑1 (MQ=255)
                     ccTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCa                                                                                                                                >  2:335706/1‑150 (MQ=255)
                     ccTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCa                                                                                                                                >  1:4480098/1‑150 (MQ=255)
                     ccTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCa                                                                                                                                >  1:2323955/1‑150 (MQ=255)
                       tCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATg                                                                                                                              >  2:1118725/1‑150 (MQ=255)
                       tCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATg                                                                                                                              >  1:1292915/1‑150 (MQ=255)
                       tCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATGGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATg                                                                                                                              <  2:5088233/150‑1 (MQ=255)
                        cGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATgg                                                                                                                             <  1:4776259/150‑1 (MQ=255)
                            cTGTAGCCGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGATTTGGTGTTGAGCAGCACTTTTGTGCCGTCTTCCAGTTGCAGGCGCGGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAg                                                                                                                         <  1:4225654/150‑1 (MQ=255)
                            cTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCTAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCCCCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAg                                                                                                                         <  1:3773197/150‑1 (MQ=255)
                             tGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTTTTTAGCAGCACTTTTGCGCCGTCTTCCCGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGTTGGTCGGCCTGCAGGCGCATGGGCAgg                                                                                                                        <  1:3277227/150‑1 (MQ=255)
                              gTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGt                                                                                                                       <  2:4412103/150‑1 (MQ=255)
                                aGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTa                                                                                                                     <  1:4011549/150‑1 (MQ=255)
                                aGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTGCCAGGTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTa                                                                                                                     <  2:338238/150‑1 (MQ=255)
                                 gCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTAc                                                                                                                    >  1:3597283/1‑150 (MQ=255)
                                 gCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTAc                                                                                                                    <  2:2783611/150‑1 (MQ=255)
                                   aGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCg                                                                                                                  >  1:786185/1‑150 (MQ=255)
                                     gcgggcgACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGAc                                                                                                                <  2:5629122/150‑1 (MQ=255)
                                     gcgggcgACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGAc                                                                                                                <  2:2323955/150‑1 (MQ=255)
                                      cgggcgACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACg                                                                                                               <  2:545475/150‑1 (MQ=255)
                                       gggcgACCGGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCCGTTGCCGGCGCTGGCGCTCGCCGACCACCGTACGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACgg                                                                                                              <  1:3016484/150‑1 (MQ=255)
                                        ggcgACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGt                                                                                                             <  2:3733674/150‑1 (MQ=255)
                                            aCCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAAt                                                                                                         >  1:2104478/1‑150 (MQ=255)
                                             ccTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCTAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATa                                                                                                        <  1:5346859/150‑1 (MQ=255)
                                              cTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAg                                                                                                       >  1:70792/1‑150 (MQ=255)
                                               tGGCGGCCGTCCTGGCGTTCTCTGGCGATTGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCGGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGc                                                                                                      <  1:2712089/150‑1 (MQ=255)
                                               tGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGc                                                                                                      >  1:5217536/1‑150 (MQ=255)
                                                 gcggcCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGccc                                                                                                    >  1:4136377/1‑150 (MQ=255)
                                                        tCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagc                                                                                             <  2:2589290/150‑1 (MQ=255)
                                                        tCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagc                                                                                             <  2:1813622/150‑1 (MQ=255)
                                                        tCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagc                                                                                             <  1:4426419/150‑1 (MQ=255)
                                                         ccTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagca                                                                                            <  2:5022418/150‑1 (MQ=255)
                                                           tGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGa                                                                                                                 <  1:983429/127‑1 (MQ=255)
                                                           tGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagcagc                                                                                          >  1:5422447/1‑150 (MQ=255)
                                                           tGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagcagc                                                                                          >  1:2623483/1‑150 (MQ=255)
                                                             gCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACcagcagcag                                                                                        >  2:1314588/1‑150 (MQ=255)
                                                              cGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCagcagcagc                                                                                       <  2:3311803/150‑1 (MQ=255)
                                                                     tGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCgg                                                                                >  2:2887341/1‑150 (MQ=255)
                                                                       gCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTg                                                                              >  2:4910688/1‑150 (MQ=255)
                                                                          aaTGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCTGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGGGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGcc                                                                           <  1:1006363/150‑1 (MQ=255)
                                                                            tGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAg                                                                         <  2:91922/150‑1 (MQ=255)
                                                                            tGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAg                                                                         <  1:4535241/150‑1 (MQ=255)
                                                                            tGCCGAATTGGTGTTGAGCAGCACTTTGGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAg                                                                         <  2:5496587/150‑1 (MQ=255)
                                                                                gAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGt                                                                     >  2:395699/1‑150 (MQ=255)
                                                                                gAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGt                                                                     >  2:1772911/1‑150 (MQ=255)
                                                                                 aaTTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCGGCGCTGCGGTGGCCAGGGGtt                                                                    >  2:702536/1‑150 (MQ=255)
                                                                                     ggTGTTGAGCAGCACTTTTGCGCCGGCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCCCCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCa                                                                <  1:319533/150‑1 (MQ=255)
                                                                                      gtgtTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAg                                                               <  2:1258620/150‑1 (MQ=255)
                                                                                       tgtTGAGCAGCACTTTGGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTATGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGt                                                              <  1:2381479/150‑1 (MQ=255)
                                                                                           gAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGCCCACCCTAAGGTGGTCGGCCTGCAGGCGCATGGGGAGGTTACCCACGGTGAATAGCCCGACCAGCCGCAGCCCTGCGGTGGCCCGGGGTTTCCAGTGACt                                                          >  1:1417128/1‑150 (MQ=255)
                                                                                           gAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACt                                                          >  1:1683511/1‑150 (MQ=255)
                                                                                            agcagcACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTg                                                         >  1:391121/1‑150 (MQ=255)
                                                                                               agcaCTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTgcgc                                                      >  2:1888620/1‑150 (MQ=255)
                                                                                                gcaCTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAAAAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCa                                                     >  1:5625158/1‑150 (MQ=255)
                                                                                                 caCTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAg                                                    <  1:4620034/150‑1 (MQ=255)
                                                                                                  aCTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAgg                                                   <  2:4098562/150‑1 (MQ=255)
                                                                                                    ttttGCGCCGTCTTCCAGTTGCATGAGCTGGCGCTCGCCGAACAACGTAATGTGGTCGGCCTGCAGGCGCATGGGCAGGTAACCGAAGGTGAATAGCACGACCATCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGgcg                                                 >  2:1516035/1‑150 (MQ=255)
                                                                                                     tttGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGgcgc                                                >  1:2994551/1‑150 (MQ=255)
                                                                                                          gcCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCcgcg                                           >  2:3570977/1‑150 (MQ=255)
                                                                                                          gcCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCGGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCcgcg                                           >  2:2472098/1‑150 (MQ=255)
                                                                                                            cGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGACTAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGcc                                         >  2:1621501/1‑150 (MQ=255)
                                                                                                            cGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGcc                                         >  2:1717946/1‑150 (MQ=255)
                                                                                                             gTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCa                                        <  1:4878745/150‑1 (MQ=255)
                                                                                                              tCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCAt                                       <  1:3466782/150‑1 (MQ=255)
                                                                                                               cTTCCAGGTGCAGGCGCTGGCGCTCGCCGACCACCGTCAGGTGGTCGGCCTGCAGGCGCATGGGGAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCGGGCGcctgc                                      <  2:1417128/150‑4 (MQ=255)
                                                                                                                ttCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGa                                     >  2:430385/1‑150 (MQ=255)
                                                                                                                 tCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGAc                                    <  2:522551/150‑1 (MQ=255)
                                                                                                                 tCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGAc                                    <  2:2142427/150‑1 (MQ=255)
                                                                                                                      ttGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATgg                                                                                                                             <  1:1324900/56‑1 (MQ=255)
                                                                                                                      ttGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCCGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCg                               >  1:2826384/1‑150 (MQ=255)
                                                                                                                        gCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGtt                             <  2:2414629/150‑1 (MQ=255)
                                                                                                                        gCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGtt                             >  1:4467071/1‑150 (MQ=255)
                                                                                                                        gCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGtt                             >  1:1755506/1‑150 (MQ=255)
                                                                                                                        gCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGtt                             <  1:1795367/150‑1 (MQ=255)
                                                                                                                                 ggcgctCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGt                    <  1:337156/150‑1 (MQ=255)
                                                                                                                                  gcgctCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTg                   <  2:2530601/150‑1 (MQ=255)
                                                                                                                                  gcgctCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCCGCGTTGCTGCTGGTg                   >  1:1702567/1‑150 (MQ=255)
                                                                                                                                     ctCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCAt                <  2:3069628/150‑1 (MQ=255)
                                                                                                                                      tCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCAtg               >  2:2085456/1‑150 (MQ=255)
                                                                                                                                         ccGACCCCCGTATGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGc            <  1:5291773/150‑1 (MQ=255)
                                                                                                                                         ccGACCACCTTACGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGc            >  1:198277/1‑150 (MQ=255)
                                                                                                                                           gACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGt          >  1:1633490/1‑150 (MQ=255)
                                                                                                                                           gACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGt          <  1:577691/150‑1 (MQ=255)
                                                                                                                                            accaccGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGTg         >  1:1845571/1‑150 (MQ=255)
                                                                                                                                               accGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGTGGcc      <  2:2063831/150‑1 (MQ=255)
                                                                                                                                                ccGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGTGGCCa     >  2:5332361/1‑150 (MQ=255)
                                                                                                                                                 cGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGTGGCCAc    >  1:1544589/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCTCGGGGACCTGGAAGTAAGCCTCGCCCTGTAGCAGGCGGGCGACCTGGCGGCCGTCCTGGCGTTCGCTGGCGAATGCCGAATTGGTGTTGAGCAGCACTTTTGCGCCGTCTTCCAGTTGCAGGCGCTGGCGCTCGCCGACCACCGTAAGGTGGTCGGCCTGCAGGCGCATGGGCAGGTTACCGACGGTGAATAGCCCGACCAGCAGCAGCGCTGCGGTGGCCAGGGGTTTCCAGTGACTGCGCAGGCGCCCGCGCCATGACCTGCGTTGCTGCTGGTGCATGTGCGTGGCCACCT  >  NC_002947/1153602‑1153898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑