| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,229,587 | A→G | 5.1% | W16R (TGG→CGG) ‡ | gltK ← | glutamate/aspartate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,229,587 | 0 | A | G | 5.1% | 822.7 / 18.4 | 252 | W16R (TGG→CGG) ‡ | gltK | glutamate/aspartate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (125/114); new base G (7/6); total (132/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 259 total aligned reads displayed.
AATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTG > NC_002947/1229438‑1229735 | aaTCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCa < 1:1248558/150‑1 (MQ=255) tCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCaga > 2:4355199/1‑150 (MQ=255) tCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCaga < 1:4279530/150‑1 (MQ=255) tCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCACGACCATGCCCTCCCaga < 1:5615995/150‑1 (MQ=255) gAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg > 2:4402700/1‑150 (MQ=255) gAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg < 1:2924532/150‑1 (MQ=255) gCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggc > 1:1086017/1‑150 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCTGGGAGggcatg < 2:563819/150‑3 (MQ=255) agtagtTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCTGGGAGggcatggt < 1:4225493/150‑5 (MQ=255) gtagtTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCTGGGAGggcatggtc < 2:1979884/150‑6 (MQ=255) gtTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGc > 1:774486/1‑150 (MQ=255) ttGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCg > 1:2233309/1‑150 (MQ=255) tGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCgg < 1:963655/150‑1 (MQ=255) tGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCACATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCgg < 2:4838029/150‑1 (MQ=255) gACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCggg < 1:718494/150‑1 (MQ=255) aCGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCgggg < 1:3462187/150‑1 (MQ=255) gTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGgat < 1:4123103/150‑1 (MQ=255) gTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGgat > 2:2192469/1‑150 (MQ=255) aGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGgatga > 1:3681495/1‑150 (MQ=255) gcgcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGAtt < 2:3622524/150‑1 (MQ=255) gcgcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGAtt < 2:3193721/150‑1 (MQ=255) gcgcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGAtt > 2:48523/1‑150 (MQ=255) cgcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGAttt < 2:3171443/150‑1 (MQ=255) gcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTc < 1:3138085/150‑1 (MQ=255) ccGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCg < 2:1447483/150‑1 (MQ=255) cGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGc > 1:2351743/1‑150 (MQ=255) gCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTg > 2:4418992/1‑150 (MQ=255) cAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCCGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGaa > 2:2432566/1‑150 (MQ=255) gTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtc > 2:2242222/1‑150 (MQ=255) tCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtcca > 2:594024/1‑150 (MQ=255) gACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccatt < 1:1026542/150‑1 (MQ=255) cagTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccatttccat < 2:3480181/150‑1 (MQ=255) tttGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTa > 2:1240298/1‑150 (MQ=255) tGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACt < 2:49392/150‑1 (MQ=255) ttGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGc > 1:1876952/1‑150 (MQ=255) ttGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGc > 1:4559907/1‑150 (MQ=255) ttGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGc > 1:2563247/1‑150 (MQ=255) gacgacAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGccc < 1:3283853/150‑1 (MQ=255) acgacAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGATTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGcccc < 2:2469602/150‑1 (MQ=255) aGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACg < 2:4715664/150‑1 (MQ=255) gcgcATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGa > 1:1165730/1‑150 (MQ=255) aTCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATc > 2:6501/1‑150 (MQ=255) cAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcag < 1:163728/150‑1 (MQ=255) tGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcc < 2:3815277/150‑1 (MQ=255) gCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca < 1:2674426/150‑1 (MQ=255) gCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca < 2:1915999/150‑1 (MQ=255) ccAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggccag > 1:3215697/1‑150 (MQ=255) cAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggccagg > 2:2359731/1‑150 (MQ=255) tGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACgg < 2:2351743/150‑1 (MQ=255) ggTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGc < 2:4203689/150‑1 (MQ=255) cAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTGCTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACttt > 1:2273599/1‑150 (MQ=255) aGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttc > 1:3196020/1‑150 (MQ=255) aCGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACGTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttcttc < 2:1621639/150‑1 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc < 1:1093219/150‑1 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc > 2:4057220/1‑150 (MQ=255) cgccgATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCa > 1:4529876/1‑150 (MQ=255) gATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCCTgcg > 1:1371668/1‑150 (MQ=255) aTGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCCTgcgc > 1:605878/1‑150 (MQ=255) aTGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATgcgc > 1:2610876/1‑150 (MQ=255) aTGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATgcgc < 1:4847887/150‑1 (MQ=255) cccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTAATTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagc < 2:1098873/150‑1 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagca > 1:3847100/1‑150 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagca > 1:2146727/1‑150 (MQ=255) aTGACCCTCAAACTGATGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcagc > 2:1027009/1‑150 (MQ=255) aTGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcagc > 2:3587210/1‑150 (MQ=255) aTGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcagc > 1:5270058/1‑150 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAg < 2:3681495/150‑1 (MQ=255) aTCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAgg > 1:1688922/1‑150 (MQ=255) aTCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAgg > 1:4526301/1‑150 (MQ=255) aTCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAgg > 1:1536079/1‑150 (MQ=255) tCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGc > 2:2920343/1‑150 (MQ=255) tttGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCAt < 2:3538446/150‑1 (MQ=255) ttGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATg > 1:1568603/1‑150 (MQ=255) gggTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCa < 1:5110868/150‑1 (MQ=255) ggTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAg < 1:1963858/150‑1 (MQ=255) gTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAgg > 2:2755858/1‑150 (MQ=255) tCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAggg > 1:2071125/1‑150 (MQ=255) tCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAggg > 1:4780595/1‑150 (MQ=255) tCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAggg > 1:4075562/1‑150 (MQ=255) aTGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTg > 2:5054553/1‑150 (MQ=255) tGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGa < 1:1794009/150‑1 (MQ=255) gACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGaa > 2:814383/1‑150 (MQ=255) gACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGaa > 2:3400346/1‑150 (MQ=255) gACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGaa < 1:4069052/150‑1 (MQ=255) gACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGaa < 1:5007665/150‑1 (MQ=255) aCCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAg < 1:3400346/150‑1 (MQ=255) gcctGCCCTCTGGGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGAGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 2:1994375/4‑150 (MQ=255) cctGCCCTCTGGGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggccagg > 1:5357141/3‑87 (MQ=255) cctGCCCTCTGGGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggccagg < 2:5357141/85‑1 (MQ=255) cATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTa < 1:2710562/150‑1 (MQ=255) ctGCCCTCTGGGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAg > 2:544305/2‑150 (MQ=255) gCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGAt > 2:1488684/1‑150 (MQ=255) ccTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAACTCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCAGGTTCAGGGTGACGTAGATCa > 2:114966/1‑150 (MQ=255) tCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGc > 2:2951729/1‑150 (MQ=255) tCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGc > 1:5085629/1‑150 (MQ=255) tCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGc < 1:3087447/150‑1 (MQ=255) tCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGc > 1:1015705/1‑150 (MQ=255) ccAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGt > 1:3733638/1‑150 (MQ=255) ccAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGt > 1:893838/1‑150 (MQ=255) cAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTg < 2:126404/150‑1 (MQ=255) | AATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTG > NC_002947/1229438‑1229735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |