| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,238,722 | A→C | 6.9% | intergenic (‑83/+19) | glpR ← / ← glpK | DNA‑binding transcriptional repressor GlpR/glycerol kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,238,722 | 0 | A | C | 6.9% | 828.8 / 36.7 | 248 | intergenic (‑83/+19) | glpR/glpK | DNA‑binding transcriptional repressor GlpR/glycerol kinase |
| Reads supporting (aligned to +/- strand): ref base A (111/120); new base C (7/10); total (118/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
ATACTGACATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTGTCGCGCAGC > NC_002947/1238575‑1238870 | aTACTGACATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATg < 1:1273674/150‑1 (MQ=255) aCTGACATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATggc > 2:2021672/1‑150 (MQ=255) gACATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATggcggc < 2:392730/150‑1 (MQ=255) aCATAGCCGCGTTCGCGTACCAGTTCGAGGCTTTGGTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCGGTGGGGCTGCCGGACCAATTCTGCAAGGATGCCGGAGGAAGGGGCTGACGGCCAGTAGACGATTGGGGCCGCATGGCGGcc > 2:3383916/1‑150 (MQ=255) aCATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCCATGCGGcc < 2:4112980/150‑1 (MQ=255) aCATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGcc > 1:3051158/1‑150 (MQ=255) aTAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGcccc < 1:64929/150‑1 (MQ=255) aTAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGcccc > 2:4368531/1‑150 (MQ=255) aGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCTGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCAAGGCGGCCCCaa > 1:4732147/1‑150 (MQ=255) aGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCCATGCGGCCCCaa < 2:1234966/150‑1 (MQ=255) gCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCCATGCGGCCCCaat < 2:3667698/150‑2 (MQ=255) gCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCCATGCGGCCCCaat < 1:4164202/150‑2 (MQ=255) gCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAAc < 2:3558046/150‑1 (MQ=255) ttCGCTTACCAGTTCGAGCATTAGATGAATGCGGGGGGGCAGAATAATGTGAGTTACTTAGGCGCTGACTTACAAATTATTAAATCATGCAGTAGGAAGGGGATGACGGCCATTATACGATTGGGGACGCATGGCGGCACCAACAGCTAt > 2:5481334/1‑150 (MQ=255) ttCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTAt > 1:2067557/1‑150 (MQ=255) gcgTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCAt < 2:1322330/150‑1 (MQ=255) gcgTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCAt < 1:5130259/150‑1 (MQ=255) gTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGc < 2:5184947/150‑1 (MQ=255) aGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGt > 1:2579260/1‑150 (MQ=255) aGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGt < 2:3133770/150‑1 (MQ=255) ttCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGa < 1:4465930/150‑1 (MQ=255) ttCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGa < 2:5088098/150‑1 (MQ=255) ttCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGa < 1:2700637/150‑1 (MQ=255) gAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGATGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCt > 1:4418606/1‑150 (MQ=255) gAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCt > 2:3004537/1‑150 (MQ=255) aGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCtt < 1:4323409/150‑1 (MQ=255) gATTTGTTGTTGGCGGGGGGGAAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTcc > 1:4372003/1‑150 (MQ=255) gATTTGTTGTTGGCGGGGGGGAAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCAGGCCTCGTGATCTTcc > 1:1535833/1‑150 (MQ=255) atatgttgttgGCGGGGGGGCAGAATCATGGGAGGTCCTGAGGGGCATCCGGACAAATTCTGCAAAGATGCCGAAGGAACGTGATGACGGCCAGTAGACGATTGGGCACGCATGGCGGCCCCAACAGCAATCAACCCTCGTGATCTTccc > 2:4096767/4‑150 (MQ=255) tttGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCa < 1:4096767/150‑1 (MQ=255) ttgGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACgg > 2:2785967/1‑150 (MQ=255) gtgGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACgg < 2:4274606/149‑1 (MQ=255) tgGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACggg < 1:1108023/150‑1 (MQ=255) gggggggCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACg > 1:4713720/1‑150 (MQ=255) gCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGAc < 2:4196151/150‑1 (MQ=255) cAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGAcc > 2:1971907/1‑150 (MQ=255) aTTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGcc > 2:1669935/1‑150 (MQ=255) ttCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCct < 1:3847365/150‑1 (MQ=255) tCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTAt > 1:817309/1‑106 (MQ=255) tCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTAt < 2:817309/106‑1 (MQ=255) aTGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCcttct > 1:2858249/1‑150 (MQ=255) aTGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCcttct > 1:1300201/1‑150 (MQ=255) gggCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCttcttc > 2:3434971/1‑150 (MQ=255) gCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCa < 1:5195/150‑1 (MQ=255) ggTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGc < 2:3162908/150‑1 (MQ=255) gTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGcc < 1:4273280/150‑1 (MQ=255) ccTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCgg < 1:3610114/150‑1 (MQ=255) tttGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCa > 1:1856964/1‑150 (MQ=255) gggCTGCCGGACAACTTCTGCAAGGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACa < 1:5325373/150‑1 (MQ=255) ggCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAg > 2:1811172/1‑150 (MQ=255) ggCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAg < 1:5627708/150‑1 (MQ=255) gCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTTGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGc > 2:1024224/1‑150 (MQ=255) gCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCttt > 2:3841305/1‑150 (MQ=255) ccGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCtttt > 2:1493375/1‑150 (MQ=255) aCAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTtttcttt < 1:1345019/150‑1 (MQ=255) aCAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTtttcttt < 1:863628/150‑1 (MQ=255) aCAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTtttcttt < 1:4767278/150‑1 (MQ=255) aaaTTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTGACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTttctttct < 1:3721427/150‑1 (MQ=255) aaaTTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTttctttct < 2:1382161/150‑1 (MQ=255) aaaTTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTttctttct > 1:4626743/1‑150 (MQ=255) aaaTTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTttctttct < 2:49849/150‑1 (MQ=255) aTTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTATTCTTTCTGc > 2:3682875/1‑150 (MQ=255) tCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGt > 1:2269541/1‑150 (MQ=255) tGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGTCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCTGGCATACAGCTTTTCTTTCTGCGtgt > 1:1989194/1‑148 (MQ=255) tGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGttt > 1:4495380/1‑150 (MQ=255) gCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTc > 1:208274/1‑150 (MQ=255) gCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTc < 1:586050/150‑1 (MQ=255) cAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCg > 2:5252092/1‑150 (MQ=255) cAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCg > 1:2242018/1‑150 (MQ=255) cAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCg > 1:5542224/1‑150 (MQ=255) aaTGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGt > 1:1276188/1‑150 (MQ=255) atgatgCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTc < 1:5222418/150‑1 (MQ=255) gatgCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACGGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCa < 2:472490/150‑1 (MQ=255) gatgCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCa < 2:5465475/150‑1 (MQ=255) aGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCggg < 2:2689784/150‑1 (MQ=255) aGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCggg < 2:2579260/150‑1 (MQ=255) gAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCt < 1:3565386/150‑1 (MQ=255) gAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCAGGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCt < 2:4343820/150‑1 (MQ=255) aCGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGc < 2:2067557/150‑1 (MQ=255) ggCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTc > 1:2432518/1‑150 (MQ=255) ggCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTc > 2:2040468/1‑150 (MQ=255) gCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCg < 2:639053/150‑1 (MQ=255) ccAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCga > 1:3815839/1‑150 (MQ=255) aGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCgatg < 1:3383916/150‑1 (MQ=255) gTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCgatga > 2:4548621/1‑150 (MQ=255) aGACGATTGGGGCCGCATGGCGGCCCCAACAGCTTTCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATc < 1:483368/150‑1 (MQ=255) aGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATc < 1:16144/150‑1 (MQ=255) aGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATc < 2:2015736/150‑1 (MQ=255) aCGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGc < 1:3392339/150‑1 (MQ=255) gATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCt < 2:3763145/150‑1 (MQ=255) gATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCt < 1:3493903/150‑1 (MQ=255) gATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCt > 2:2457889/1‑150 (MQ=255) ttGGGGCCGCCATGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTg > 2:4009129/1‑150 (MQ=255) ttGGGGCCGCCATGCGGCCCCAACAGCTATCATGCCTCGTCATCTTCCAAGTCACGGTTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATAGCCTTg > 2:1180206/1‑150 (MQ=255) tGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTGt > 1:4194292/1‑150 (MQ=255) ggggCCGCCATGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCg > 2:4609929/1‑119 (MQ=255) ggggCCGCCATGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCg < 1:4609786/119‑1 (MQ=255) gCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTGTcgcg > 2:2455808/1‑150 (MQ=255) gCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTGTcgcg > 2:5373327/1‑150 (MQ=255) gCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTGTCGCGCAg > 1:245677/1‑150 (MQ=255) | ATACTGACATAGCCGCGTTCGCGTACCAGTTCGAGGATTTGTTGTTGGCGGGGGGGCAGATTCATGGGCGGTCCTTTGGGGCTGCCGGACAAATTCTGCAATGATGCCGTAGGAAGGGGATGACGGCCAGTAGACGATTGGGGCCGCATGGCGGCCCCAACAGCTATCATGCCTCGTGATCTTCCCAGTCACGGGTACGCTCGACCGCCTTCTTCCAGCCGGCATACAGCTTTTCTTTCTGCGTTTCGTCCAGTTGCGGGCTGAACTCACGCTCGATGATCGCCTTGTCGCGCAGC > NC_002947/1238575‑1238870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |