| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,253,172 | G→A | 9.7% | intergenic (+30/+38) | argG → / ← PP_1089 | argininosuccinate synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,253,172 | 0 | G | A | 9.7% | 709.5 / 49.2 | 246 | intergenic (+30/+38) | argG/PP_1089 | argininosuccinate synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (123/99); new base A (15/9); total (138/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 254 total aligned reads displayed.
AACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTGG > NC_002947/1253023‑1253321 | aaCATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCgg > 1:234852/1‑150 (MQ=255) cGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg < 1:2407872/150‑1 (MQ=255) gCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCggg < 1:2796116/150‑1 (MQ=255) aCCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGG‑tt < 2:2392963/150‑1 (MQ=255) ccTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGG‑ttt < 2:4100840/150‑1 (MQ=255) tttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑ttttt > 2:44393/1‑150 (MQ=255) tttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGG‑ttttc < 2:4061279/150‑2 (MQ=255) tttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGG‑ttttc < 2:2508036/150‑2 (MQ=255) tGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑ttttttt < 2:683157/150‑1 (MQ=255) gaagaaGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTa < 1:2563441/150‑1 (MQ=255) agaTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGccc < 2:5509297/150‑1 (MQ=255) agaTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGccc > 1:2923790/1‑150 (MQ=255) agaTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGccc < 1:919684/150‑1 (MQ=255) ggtgCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCaaa < 2:571272/150‑1 (MQ=255) gCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGc < 2:4783745/150‑1 (MQ=255) gCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGc < 2:3295115/150‑1 (MQ=255) cTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCgg < 1:3646291/150‑1 (MQ=255) tACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCggg > 1:5473345/1‑150 (MQ=255) tACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCggg > 1:2892508/1‑150 (MQ=255) aCAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGt > 2:2093177/1‑150 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCg > 1:3314985/1‑150 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCg > 2:2319352/1‑150 (MQ=255) cAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTc < 1:4297058/150‑1 (MQ=255) aGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCa > 2:69497/1‑150 (MQ=255) gCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAAc > 1:354279/1‑150 (MQ=255) aGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGGTCAACtt > 2:4927575/1‑150 (MQ=255) gATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTc < 1:1080149/150‑1 (MQ=255) gctgctGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCgg < 2:1687085/150‑1 (MQ=255) gctgctGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGt < 2:3122448/150‑1 (MQ=255) gctgctGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGt < 1:5404816/150‑1 (MQ=255) ttCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCAcat > 2:4297887/1‑150 (MQ=255) ttCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCAcat > 1:4522062/1‑150 (MQ=255) atcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCAcatcat > 2:5378978/1‑150 (MQ=255) tcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACatcatc < 1:1887852/150‑1 (MQ=255) tcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAACGGCCGTTCGCTGCTCTGATTGCTGGCGTGAGCGAAAACCCCGGCTCGGTCCGGGG‑TTATATTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACatcatc < 2:3360128/150‑1 (MQ=255) caAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCg < 2:2877115/150‑1 (MQ=255) aaGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGc > 2:369854/1‑150 (MQ=255) aaGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGc > 1:4106031/1‑150 (MQ=255) aGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGcc < 2:4728178/150‑1 (MQ=255) gCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGccc < 2:2042321/150‑1 (MQ=255) cTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCt > 1:2247851/1‑150 (MQ=255) tCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAATCCCCGGCTCGGTCCGGGG‑TTTTTGTCTGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTc > 2:3857460/1‑150 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGa < 2:1009033/150‑1 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGa < 2:5200726/150‑1 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGa < 2:5200708/150‑1 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGa > 2:1866769/1‑150 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAg > 2:3823414/1‑150 (MQ=255) cACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgc > 2:1176848/1‑150 (MQ=255) aCTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcg > 2:1571343/1‑150 (MQ=255) aCTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcg < 1:4869395/150‑1 (MQ=255) cTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCTGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcgc < 2:2683450/150‑1 (MQ=255) cTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcgc < 1:1323958/150‑1 (MQ=255) gTATGCGCATTGCCGCCACCAAGGGCCGTTCGCTGCTCTGATTGCGGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTGTTATGCCCGCGCAAGGGCGGGTCGTTCATCGTCGGTGGCTCACATCATCGCCCTCGAGGGCGCTggt > 2:1142781/1‑148 (MQ=255) gTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGAt < 1:1866769/150‑1 (MQ=255) tATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCTGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATc < 1:3452403/150‑1 (MQ=255) cgcATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGaaa < 1:4858947/150‑1 (MQ=255) aTTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCt < 2:3929002/150‑1 (MQ=255) tGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTgc < 2:1067553/150‑1 (MQ=255) cgccAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGca > 1:3885317/1‑150 (MQ=255) caaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGa < 2:346052/150‑1 (MQ=255) aGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACg > 2:1192593/1‑150 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGt < 1:3850362/150‑1 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGt > 2:3009011/1‑150 (MQ=255) cGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGt < 2:5419849/150‑1 (MQ=255) gTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTc > 2:4522963/1‑150 (MQ=255) ttCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCCCATTGACGTCTGTcc > 1:2006403/1‑150 (MQ=255) ttCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑ATTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTcc < 2:2550447/150‑1 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGa > 2:4987335/1‑150 (MQ=255) tctGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTGCAGATTACa > 1:582711/1‑150 (MQ=255) tctGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACa > 1:194331/1‑150 (MQ=255) ctGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaa < 2:2708324/150‑1 (MQ=255) gATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaaaa < 1:1796824/150‑1 (MQ=255) gATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaaaa < 2:3085122/150‑1 (MQ=255) gATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaaaa > 2:4587141/1‑150 (MQ=255) gATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaaaa > 2:5047397/1‑150 (MQ=255) gATTGCTGGCGTGTGCGAAAACACCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTAAAATACGGTGGATCAAATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAATTACGTCTTTCCACAGTACaaaa > 1:1574355/1‑150 (MQ=255) gCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAgcgc < 2:561492/150‑1 (MQ=255) tGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCa < 2:2824152/150‑1 (MQ=255) gtgtGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGAcg > 1:1740437/1‑150 (MQ=255) tgCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACACAAGCGCCAGAcgcgc < 1:1192593/150‑1 (MQ=255) tgCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGAcgcgc < 2:5523754/150‑1 (MQ=255) aaaaaaCCCCGGACCGAGCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGCCTGTCCAGAGTACAAAAGCGCCAGACgcgcgc > 1:5239688/3‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAGAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt < 2:2247851/150‑1 (MQ=255) aaaaaCCCCGGACCGAGCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGa > 1:4611656/2‑126 (MQ=255) aaaaaCCCCGGACCGAGCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt > 1:1565379/2‑150 (MQ=255) aaaaaCCCCGGACCGAGCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATGACAAAAGCGCCAGACgcgcgcg > 2:3628989/2‑149 (MQ=255) aaaCCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTgg > 2:4490464/1‑150 (MQ=255) aaCCCCGGACCGAGCCGGGG‑TTTTCTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGc > 2:932485/1‑150 (MQ=255) ccccGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCATATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTc < 2:4111912/150‑1 (MQ=255) cccGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCg > 1:1405197/1‑150 (MQ=255) cccGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATAGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAGTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCg > 2:1399674/1‑150 (MQ=255) ccGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCgg > 2:3553862/1‑150 (MQ=255) ccGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCgg > 1:3169851/1‑150 (MQ=255) ggCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGc < 2:3223626/150‑1 (MQ=255) ggCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCGGGCTCGGGc > 1:2104100/1‑150 (MQ=255) cTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGACTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCgg > 2:4240563/1‑150 (MQ=255) tCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGt > 2:2203997/1‑150 (MQ=255) tCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGt < 1:2053098/150‑1 (MQ=255) ggTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTg > 1:5080421/1‑150 (MQ=255) gTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTgg < 2:1766586/150‑1 (MQ=255) | AACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGG‑TTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTGG > NC_002947/1253023‑1253321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |