| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,373,156 | A→C | 5.3% | intergenic (+30/‑153) | PP_1193 → / → PP_1194 | membrane protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,373,156 | 0 | A | C | 5.3% | 779.2 / 21.8 | 224 | intergenic (+30/‑153) | PP_1193/PP_1194 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (100/112); new base C (4/8); total (104/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 230 total aligned reads displayed.
TTGGTGGTGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGCCTCTGTCAA > NC_002947/1373007‑1373305 | ttGGTGGTGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGa > 2:3128054/1‑150 (MQ=255) ggtggtGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACg > 2:2577539/1‑150 (MQ=255) gtggtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACgg < 2:2232425/150‑1 (MQ=255) gtggtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACgg > 1:4584821/1‑150 (MQ=255) tggtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACggg > 2:1727793/1‑150 (MQ=255) tggtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACggg > 1:2027142/1‑150 (MQ=255) gAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGtttt < 1:4016530/150‑1 (MQ=255) cTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCGTCCGCTGGGTTTTGTAt < 2:1054364/150‑1 (MQ=255) tGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCGTCCGCTGGGTTTTGTATg < 1:125672/150‑1 (MQ=255) gTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAg > 1:3505538/1‑150 (MQ=255) gACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCa > 2:4340998/1‑150 (MQ=255) aCGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAg < 2:1914124/150‑1 (MQ=255) cGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTgg > 2:912792/1‑150 (MQ=255) cGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTgg < 2:140971/150‑1 (MQ=255) ggCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGc < 1:1012216/150‑1 (MQ=255) ctgtgGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCtt < 2:2984441/149‑1 (MQ=255) aTGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCtt < 1:4802559/150‑1 (MQ=255) gtggCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCttt > 1:5154769/1‑150 (MQ=255) gCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATc < 1:2953703/150‑1 (MQ=255) gCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATc < 2:4690005/150‑1 (MQ=255) gAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCAc < 2:3441896/150‑1 (MQ=255) ccGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCa < 1:1740592/150‑1 (MQ=255) ggTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCAtt < 1:5007550/150‑1 (MQ=255) tAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTc > 2:5540598/1‑150 (MQ=255) gACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAAt < 1:3160672/150‑1 (MQ=255) gACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAAt < 2:2419958/150‑1 (MQ=255) gACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAAt > 1:3980039/1‑150 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCt > 2:2098773/1‑119 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGc > 2:2756303/1‑126 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGc < 1:2756085/126‑1 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAg > 2:403216/1‑150 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAg > 1:832088/1‑150 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAg > 1:653680/1‑150 (MQ=255) ggTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAgcgc < 1:744892/150‑1 (MQ=255) gtgtTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCTGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCt < 2:5159185/150‑1 (MQ=255) gtgtTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCt < 1:3081464/150‑1 (MQ=255) ttCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGAc > 2:2823118/1‑150 (MQ=255) ttCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGAc > 1:3409557/1‑150 (MQ=255) tCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACa < 1:4970446/150‑1 (MQ=255) cATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAAGGAGCGCTGACAg > 1:2873405/1‑150 (MQ=255) aTGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGc > 1:4115650/1‑150 (MQ=255) ccGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGGCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCttt > 2:557317/1‑150 (MQ=255) ccGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCttt < 1:1946900/150‑1 (MQ=255) cggcggCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCtttt > 2:788092/1‑150 (MQ=255) cggcggCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCtttt < 1:2577539/150‑1 (MQ=255) cggcggCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCtttt < 2:1215193/150‑1 (MQ=255) cggcggCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCtttt < 1:421943/150‑1 (MQ=255) ggcggcGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCGGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCttttt > 1:1369926/1‑150 (MQ=255) gcggcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTc < 2:3333536/150‑1 (MQ=255) gcggcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTc < 1:3052147/150‑1 (MQ=255) gcggcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTc < 1:157134/150‑1 (MQ=255) gcgAGGCCTGTGATGACAACAGCAGAAGCTGATTGGCGCGGACCCGAAGTTGCCCATACAAAACCCAGCTGAAGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTc < 2:5184045/150‑1 (MQ=255) gcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTc < 2:4799634/150‑1 (MQ=255) gcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTc < 1:2285965/150‑1 (MQ=255) gcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTc < 1:324003/150‑1 (MQ=255) gcgAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTc < 1:1887689/150‑1 (MQ=255) gAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGt < 2:4112150/150‑1 (MQ=255) ggCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCGTTTCCAATGAGAGCTGACAGCTTTTTCCTCGTcc > 2:5602071/1‑150 (MQ=255) ggCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTcc > 2:722773/1‑150 (MQ=255) gACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGat > 2:708361/1‑150 (MQ=255) aacaGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATg > 2:2728927/1‑150 (MQ=255) gAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCgg < 1:945947/150‑1 (MQ=255) tGATTGGCGCTGACCCGAAGTGGTCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGc > 2:2196184/1‑150 (MQ=255) tGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGc > 2:2714044/1‑150 (MQ=255) ttGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTg < 2:927411/150‑1 (MQ=255) tGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATACCGGGATATGATTGCGGTTTGCGTgg < 2:3494019/150‑1 (MQ=255) ggCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTggg < 1:912955/150‑1 (MQ=255) ggCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTggg < 2:843461/150‑1 (MQ=255) gcgcTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGa < 2:2563793/150‑1 (MQ=255) gcgcTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGa > 2:4249007/1‑150 (MQ=255) gcgcTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGa < 2:1111590/150‑1 (MQ=255) cTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTa > 2:2921493/1‑150 (MQ=255) tGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTaa > 2:3749948/1‑150 (MQ=255) aCCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAAtt < 2:569755/150‑1 (MQ=255) ccGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTcc > 2:2885728/1‑150 (MQ=255) cGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTc > 1:1733400/1‑109 (MQ=255) cGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTc < 2:1733400/109‑1 (MQ=255) aaGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCcgc > 2:5038521/1‑150 (MQ=255) gTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGt < 1:2210318/150‑1 (MQ=255) tGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTc < 2:3906598/150‑1 (MQ=255) ctgctcATACAAAACCCGTCCGCTGGGTTTTGTATGGGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTc > 1:1222876/6‑150 (MQ=38) ggCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCt < 2:2168062/150‑1 (MQ=255) ccATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCGATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGAGTAATTCCCGCGTCTtat > 1:4753192/1‑150 (MQ=255) ccATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTtat > 1:1307796/1‑150 (MQ=255) ccATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTtat > 2:1239697/1‑150 (MQ=255) tACAAAACCCGTCCGCTGGGTTTTGTATGGGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGGCAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACt > 2:3031680/1‑150 (MQ=255) tACAAAACCCGTCCGCTGGGTTTTGTATGGGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAAGGAGCGCGGGCAGCTTTTTCCTCGTCCCTGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACt > 2:543580/1‑150 (MQ=255) tACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACt < 1:3588627/150‑1 (MQ=255) tACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACt < 2:3651491/150‑1 (MQ=255) cAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTgg < 2:5386152/150‑1 (MQ=255) cAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTgg > 2:1597980/1‑150 (MQ=255) cAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTgg < 1:3651797/150‑1 (MQ=255) aaaaCCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGc < 1:1630888/120‑1 (MQ=255) aaaaCCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTggg > 1:1149485/1‑150 (MQ=255) aaaCCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGt < 1:3621132/150‑1 (MQ=255) aCCCCGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGc < 2:4117423/150‑1 (MQ=255) ccAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGCct < 1:2772994/150‑1 (MQ=255) cAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGCctc > 1:5458953/1‑150 (MQ=255) aGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGCctct > 1:1931790/1‑150 (MQ=255) aGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGCctct > 2:5288703/1‑150 (MQ=255) | TTGGTGGTGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGACAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGGGTGCCTCTGTCAA > NC_002947/1373007‑1373305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |