| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,154 | T→A | 7.0% | T474S (ACC→TCC) ‡ | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,154 | 0 | T | A | 7.0% | 604.7 / 23.8 | 229 | T474S (ACC→TCC) ‡ | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (113/90); new base A (2/13); total (117/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.91e-01 | |||||||||||
Only 100 of 231 total aligned reads displayed.
TTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1469007‑1469303 | ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt > 1:3971245/1‑150 (MQ=255)ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt > 1:4111699/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc < 2:4992457/150‑1 (MQ=255) gCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgcgc < 2:796840/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa < 1:1536256/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 2:3758295/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 1:990879/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 2:5518957/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 1:4477452/150‑1 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCag < 2:3748891/150‑2 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 1:3361975/150‑2 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 2:1164564/150‑2 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 1:2945028/150‑2 (MQ=255) cGATCCCCTGGTAGGAACCCTGCGGCGGGACCAGCGCGGCGTGCGCGGCACCACCACACAAGGCCAC‑CGCGAGCAGGGCGGGGCTGGAACTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 2:3402219/150‑2 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg > 2:3691894/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg > 1:4993592/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg > 1:3545992/1‑150 (MQ=255) ccccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCGTGCCTGCGCAGACCGCGCAGGCaggcca < 1:3091624/150‑6 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCgg > 1:2598016/1‑149 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAACTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:2215712/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:4591955/1‑150 (MQ=255) gtGGTTGTAACCCTGGGGGGGTACCAGCGCGGGGTGCGCGGCACCACAAAAAATGGCAAA‑CGGTTGCTGGGGGGGGCTGTAAATTGTTTTTAAATGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGGGGTCTGCGCAGGCACGGCGAAg < 2:5050829/149‑1 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 1:4752656/1‑150 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGAGCGGGCATCGCAGGCACCGCGAAg > 1:1072621/1‑150 (MQ=255) gtagtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAggtg > 2:4458584/1‑150 (MQ=255) gtagtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAggtg > 1:2096372/1‑150 (MQ=255) gtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGttgttg > 2:1374363/1‑150 (MQ=255) aaCCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCg > 2:4742371/1‑150 (MQ=255) aCCCTGCGTGGGTACCAGGGCGGCGTGCGCGGCACCACAAAACACGCCCAA‑CGCGATCAGGGCGGGGATGTAAATTCTTTTCAAAAGGGTAATGGTTCGCCACACTGCCCTGCCTCCGCTTACTGCCATGCCACGGCGAAGTTGTTGCGt < 2:1853979/150‑1 (MQ=255) aCCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAACTCGTTTGAAAAGGGTCATTGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGt > 2:3969577/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 1:588456/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 1:837916/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:4379991/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGttt > 1:2012640/1‑150 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg > 2:1262201/1‑150 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg > 1:5392094/1‑150 (MQ=255) cggcggTACCCGCGCGGGGTGCGCGGCACCACCAAACAAGCCCAA‑CGCGAGCCGGGGGGGGCTGTAAATTCTTTTCAAATGGGTCATGGGTCGCCTCACTGGCCGGCCGGGGCGGTCTGCGCAGCCACGGCGAAGTTGTTGCGTTTGCag < 2:1705468/150‑1 (MQ=255) gcggTACCCGCGCGGCGTGCGCGCCACCACAAAACACGCCCAC‑CGCGAGCTGGGGGGGGCTTCAATTTCTTTTCAAATGGGTCTTGGGCCGCCAAACGGGCCGGCCTGCGCGGTGTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCagag < 2:2565384/150‑1 (MQ=255) ggTACCAGCGCGGCGTGCGCGGCACCACAAAACACGGCCAA‑CGCGAGCCGGGCGGGGCTGCAACTTCGTTTGAACAGGGTCATGGGTCGCCACACTGGCCTGCCTGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCt < 2:4899590/150‑1 (MQ=255) ttACCCGCGGGGCGTGGGCGGCACCACCAAACTCGCCAAA‑GGCTCGCAGGGGGGGGCTGTAATTTCGTTTTAAATGGTTCTTGGGTCGCCCCCGGGGCGGGCGGGCGGGGTTGGGGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt < 2:1004241/149‑1 (MQ=255) gTACCCGGGCGGCGTGCGGGCCCCCCCCAACCAAGGCCCC‑GGCGTGCGGGGGGGGGCTGTAATTTGTTTTGAACCGGGTATGGGGGGGCCCCCGGGGCGGGCGGGCGCGTCCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt < 2:1004075/150‑1 (MQ=255) gTACCCGGGCGGCGGGCGCGCCCCCACCACCCACGGCCAC‑CGCGCGCGGGGGGGGGCTGTAAATTCGTTTCAAACGGTGCTGGGGTCGCCCCAGGGGCCGGCCGGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt < 2:2622910/150‑1 (MQ=255) tACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTg > 1:3842861/1‑150 (MQ=255) aGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTG‑AAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTc > 1:4640484/1‑150 (MQ=255) gcggcgTGCGCGGCACCACAAACCAAGGCCAC‑CGCGAGCCGGGGGGGGTGGGAAATTCTTTTGAAACGGGTCATGGGTCGCCTCACGGGCCGGCGTGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa < 2:2882855/150‑1 (MQ=255) gcgcgcCACCCCCAACCCCGCCCAC‑CGCGCGCGGGGGGGGGGTGTAATTTCTTTTCAAATGGGCCTGGGGCCGCCGCCGGGGCCGGCGGGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 1:1047809/150‑1 (MQ=255) gcgcgcCACCACCAAACAAGGCAAA‑CGCGAGCCGGGGGGGGCTGTAAATTCTTTTTAAAAGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGTTTTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:5377174/150‑1 (MQ=255) gcgcGGCACCACCAAACACGGCCAA‑CGCGAGCAGGGCGGGGCTGGAATTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:5108812/150‑1 (MQ=255) caccacCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGcc > 2:4058385/1‑150 (MQ=255) accaccAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCg > 2:1670022/1‑150 (MQ=255) caccaAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCCGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:1810942/1‑150 (MQ=255) caAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCAGGGTGCCGCTTTc > 1:2930833/1‑150 (MQ=255) aaacccggCCAA‑CGCGAGCCGGGGGGGGCTGTAATTTGTTTTTAAATGGGTCAGGGGTCGCCTCACTGGCCTGCGGGGGGGGTCGGCGCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 1:1813070/144‑1 (MQ=255) aaaCAAGGCCAA‑CGCGAGCTGGGGGGGGCTGTAAATTGGTTTTAAATGGGTCTTGGGCCGCCTCACTGGCCTGCGTGGGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 1:2746613/150‑1 (MQ=255) acgcccAC‑CGCGCGCGGGGGGGGGCTGGAACTTCGTTTTAAACGGTCCATGGGGCGCCTCAGTGGCCGGCCGGCGGGGGGGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGcc < 2:2011954/146‑1 (MQ=255) agCCAACCGCGTGCTGGGCGGGGCTGTAAATTCGTTTGAAATGGGTCATGGGTCGCCCCACTGGCCTGCCTGCGCGGTCGGCGCGGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:3712053/149‑1 (MQ=255) gCCAA‑CGCGAGCAGGGCGGGGCGGGAAATTCGTTTGAAATGGGTCATGGGGCGCCTCACGGGCCTGCGTGCGCGGTCTGGGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt < 2:3197601/150‑1 (MQ=255) cAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt > 1:4827303/1‑150 (MQ=255) caccgcgAGCTGGGGGGGGGTGTAATTTGTTTTTAAATGGGTCTTGGGTCGCCTCACTGGCGTGCCTGGGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt < 2:4823056/147‑1 (MQ=255) ggcgctggggggggCTGGAATTTCTTTTTAAATGGGTACTGGGTGGCCAAACTGGCGTGCGGGCGCGGCCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:60688/144‑1 (MQ=255) gAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCg > 2:4330028/1‑150 (MQ=255) aGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCATCTGGGTGCCGCTTTACGGCCCCTGTACCTCGAAcg > 1:2464659/1‑150 (MQ=255) gggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc > 2:1120073/1‑150 (MQ=255) gggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc > 2:3594627/1‑150 (MQ=255) ggggggTTGTAATTTCGTTTAAAACGGGACCTGGGGCCCCTCACGGGCCGCCCTGCGGGTCCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:2574791/148‑1 (MQ=255) gggCTGGAAATTCGTTTGAAATGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCa < 2:3702971/150‑1 (MQ=255) ggCTGTAAATTGTTTTTAAATGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAg < 1:4675386/150‑1 (MQ=255) gCTGTAATTTCTTTTTAAATGGGCCTGGGGCCGCCCCCCGGGCCTGCGGGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAgg < 1:224457/150‑1 (MQ=255) cTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgc > 2:4045199/1‑150 (MQ=255) ggAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAAGCGAGCAGgcgc > 1:3630850/1‑150 (MQ=255) gAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTTCGTTTTGAGAGGTTTGCTTCGACCATCTGGGTGCCGCGTTCCGGCCCCTGTACCACGAACGCGAGCAGGCgct > 1:1494653/1‑150 (MQ=255) gAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCACGCACCGCGAAGTTGTTTCGGTTTCAGAGCATGGCGTCGAACTTCTTGGTGCCGCTTTCCGGCCCCAGTAACACGAAACCGAGCAGgcgca > 1:195689/1‑149 (MQ=255) gTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCtggctggc > 2:1304653/1‑150 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc > 1:3258714/1‑150 (MQ=255) gAAACGGGTCTTGGGTCGCCTCACTGGCCGGCCTGCGCGGGCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg < 2:2948185/150‑1 (MQ=255) gAAACGGGTCCTGGGTCGCCCCACTGGCCGGCCGGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg < 2:1404843/150‑1 (MQ=255) gAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTGTGCGCAGGCACGGCGAAGTTGTTGGGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 1:1334069/1‑150 (MQ=255) aaaaGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGt > 1:4528101/1‑150 (MQ=255) aatgggTCATGGTCCGCAACACTGCCCTGCCGGCGCGGTCTCCGAAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGACCCAGTc < 2:1206389/147‑1 (MQ=255) tgggTCTTGGGTCGCCTCAGTGGCCGGCGGGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCt < 1:578704/149‑1 (MQ=255) gTCCTGGGTCGCCTCACTGGCCTGCCTGGGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt < 2:3830643/150‑1 (MQ=255) tGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTACCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTc < 2:4262952/150‑1 (MQ=255) gggTCGCCTCAGGGGCGTGCGTGCGGGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcg < 1:4273499/150‑1 (MQ=255) gggTCCCCACACGGGCCTGCCTGCGCGGACTGCCCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcg < 1:4163860/150‑1 (MQ=255) gggcGCCTCCCGGGCCGGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:2215213/147‑1 (MQ=255) ccTCACTGGCCTGCCTGCGCGGTCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATc < 2:1475818/150‑1 (MQ=255) cACTGCCCCCCCTCCGCGGTCTCCCAAGCCACGGCGAAGTTGTTGCGATTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTgg < 2:588456/150‑1 (MQ=255) cTGGCCTGCCTGGGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:1374363/150‑1 (MQ=255) cTGGCCTGCCTGCGCGGTCTGTGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:5109724/150‑1 (MQ=255) cTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:4113997/150‑1 (MQ=255) gcctgcctGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGAc > 1:2365505/1‑150 (MQ=255) tttcccgcgcGATCAGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:5226261/7‑150 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:5109989/1‑150 (MQ=255) tgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCgg > 2:3560011/1‑150 (MQ=255) gcgcGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGc > 2:5429929/1‑150 (MQ=255) cgGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGt > 2:1637674/1‑150 (MQ=255) cgGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGt > 2:1967739/1‑150 (MQ=255) cgGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGt > 2:2460911/1‑150 (MQ=255) gTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCg < 2:4977828/150‑1 (MQ=255) gTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCg < 2:4923204/150‑1 (MQ=255) | TTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAA‑CGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1469007‑1469303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |