| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,501,772 | T→C | 5.2% | intergenic (+48/+24) | mdeA → / ← PP_1309 | methionine gamma‑lyase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,501,772 | 0 | T | C | 5.2% | 810.9 / 20.0 | 249 | intergenic (+48/+24) | mdeA/PP_1309 | methionine gamma‑lyase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (134/101); new base C (9/4); total (144/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 253 total aligned reads displayed.
CATCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGTGC > NC_002947/1501623‑1501921 | cATCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGACATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCtt < 1:3436486/150‑1 (MQ=255) tCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGc > 2:5446788/1‑150 (MQ=255) aCGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGa > 1:3541625/1‑150 (MQ=255) aCGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGa < 1:2897220/150‑1 (MQ=255) cGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAg < 1:3861773/150‑1 (MQ=255) ggATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGc < 1:662617/150‑1 (MQ=255) gATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGcc < 1:5446788/150‑1 (MQ=255) atCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGATCAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCttt < 1:1167950/150‑1 (MQ=255) cGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTATGTTGCCCGCGACGAGGCCATTTAATCCAGCCCACAAAAATGTCCTCTTGCGAGGCCTTTGt < 2:1280897/150‑1 (MQ=255) gAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTca > 2:4148605/1‑150 (MQ=255) gAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTca < 2:3854845/150‑1 (MQ=255) gAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTca < 2:3712224/150‑1 (MQ=255) aGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAATAAAGGCCTCTTGCGAGGCCTTTGTcac > 1:5196902/1‑150 (MQ=255) gTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTc > 1:4329866/1‑150 (MQ=255) gTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTc < 2:2527085/150‑1 (MQ=255) ttGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCa > 1:1500866/1‑150 (MQ=255) ttGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCa > 2:1173388/1‑150 (MQ=255) ggTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGa < 1:2494865/150‑1 (MQ=255) cGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCaa < 1:2084088/150‑1 (MQ=255) gTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAAc > 2:2417323/1‑150 (MQ=255) tCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACg > 2:1113761/1‑150 (MQ=255) gTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGc > 2:4274337/1‑120 (MQ=255) cGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGa > 1:1612957/1‑150 (MQ=255) ggggCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGccc > 1:4819676/1‑150 (MQ=255) gggCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCg < 1:5051291/150‑1 (MQ=255) gggCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCg < 1:3286464/150‑1 (MQ=255) gaTGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTtcg > 1:2984503/1‑150 (MQ=255) aTGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTtcgt < 1:4148605/150‑1 (MQ=255) aTGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCGGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCACCCCACACAAAAGGCCTCTTGCGAGGCCATTGTCACATACAGATCAACGCTTGAGCCCGTAGCTTtcgt < 2:1958975/150‑1 (MQ=255) tgGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGa < 2:3260630/150‑1 (MQ=255) tgGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGa < 1:1043539/150‑1 (MQ=255) ggaggaCCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAg > 2:3558436/1‑150 (MQ=255) gaggaCCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGc > 1:3657954/1‑150 (MQ=255) gaggaCCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGc < 1:828305/150‑1 (MQ=255) tgctgGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCg < 1:3375331/150‑1 (MQ=255) ggCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGa < 1:3481564/150‑1 (MQ=255) aGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGtt > 2:2645100/1‑150 (MQ=255) aGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGtt > 1:2409503/1‑150 (MQ=255) tGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAgg > 1:5127090/1‑150 (MQ=255) gTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGgc > 2:622537/1‑150 (MQ=255) tCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGgcg > 1:2652417/1‑150 (MQ=255) gAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCt > 2:1804317/1‑150 (MQ=255) gAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCt > 1:1201758/1‑150 (MQ=255) aaCAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCtt > 2:2201042/1‑150 (MQ=255) aGGCATTGCAGGCCTGCGGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCg > 2:334703/1‑150 (MQ=255) gCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGt > 2:4750478/1‑150 (MQ=255) gCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGt > 2:4287597/1‑150 (MQ=255) aTTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAAAGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGc > 1:5133642/1‑150 (MQ=255) ttGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCa < 2:4794362/150‑1 (MQ=255) gCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATa > 2:3613932/1‑150 (MQ=255) cAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAg > 2:521346/1‑150 (MQ=255) aGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGt > 1:1908856/1‑150 (MQ=255) aGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGt > 2:355249/1‑150 (MQ=255) tgctgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTcgcgc > 2:5011627/1‑150 (MQ=255) tgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGc > 1:848929/1‑150 (MQ=255) tgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGc > 2:2012848/1‑150 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAAc > 1:4696648/1‑81 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAAc < 2:4696648/81‑1 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCtt < 2:372332/85‑1 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCtt > 1:372332/1‑85 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCa > 1:584810/1‑150 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCa > 1:1433367/1‑150 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCa > 1:4219615/1‑150 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCa > 2:1794034/1‑150 (MQ=255) ttAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCAc > 2:4500594/1‑150 (MQ=255) gCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTcggcg < 1:3041878/150‑1 (MQ=255) ccGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgt > 2:2879336/1‑150 (MQ=255) ccGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgt < 2:3471722/150‑1 (MQ=255) ccGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgt > 2:5353733/1‑150 (MQ=255) cgcgAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgtg > 1:2294963/1‑150 (MQ=255) cgcgAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgtg > 2:1386512/1‑150 (MQ=255) gAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCt < 1:4016141/150‑1 (MQ=255) agagGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCttt < 1:4373245/150‑1 (MQ=255) agagGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCttt < 2:351353/150‑1 (MQ=255) agGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAg < 2:3150415/150‑1 (MQ=255) agGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAg < 2:3689678/150‑1 (MQ=255) cATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCACGTAGCTTTCGTCGAGCATGACAGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTgg > 1:4465341/1‑150 (MQ=255) ttGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTgggg > 1:5334627/1‑150 (MQ=255) ttGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTgggg > 1:2204788/1‑150 (MQ=255) tGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGt < 1:1302963/150‑1 (MQ=255) aaTCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCa > 1:258493/1‑150 (MQ=255) tCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTcggcg < 1:5522880/129‑1 (MQ=255) tCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAgg > 2:1070275/1‑150 (MQ=255) tCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGCTGGGGTCAgg > 1:3513122/1‑150 (MQ=255) ccAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGc < 2:1418243/150‑1 (MQ=255) cAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCg > 2:451917/1‑150 (MQ=255) aGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCgg < 1:1113810/150‑1 (MQ=255) ccACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCa > 1:1568000/1‑150 (MQ=255) cacaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAc > 2:4847680/1‑150 (MQ=255) acaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAgg < 2:2744081/87‑1 (MQ=255) acaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCagt > 2:569490/1‑148 (MQ=255) gacaaaGGCCTCGCAAGAGGCCTTTTTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAcgcg > 2:2112203/4‑150 (MQ=255) aaaGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc < 1:179798/150‑1 (MQ=255) aaaGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc > 2:717570/1‑150 (MQ=255) aaaGGCCTCGCAAGAGGCCTTTGTCACATTCAGATCAACGCTTGTGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc > 1:5213720/1‑150 (MQ=255) aaaGGCCTCGCAAGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc > 1:617194/1‑150 (MQ=255) tctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCgg > 2:383500/1‑150 (MQ=255) tctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCgg > 2:2956234/1‑150 (MQ=255) tctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCgg < 1:4287477/150‑1 (MQ=255) ctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGt < 1:5511414/150‑1 (MQ=255) | CATCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGTGC > NC_002947/1501623‑1501921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |